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[+] Show/hide bicluster #162 rows and columns.
bicluster 162
Mycobacterium tuberculosis H37Rv
15x36
[+] Show/hide bicluster #162 rows (genes).
bicluster 162 genes
Mycobacterium tuberculosis H37Rv
15
[+] Show/hide bicluster #162 rows (short gene names).
bicluster 162 short names
Mycobacterium tuberculosis H37Rv
15
short_name
[+] Show/hide bicluster #162 rows (long gene names).
bicluster 162 long names
Mycobacterium tuberculosis H37Rv
15
long_name
[+] Show/hide bicluster #162 rows (NCBI RefSeq gene IDs).
bicluster 162 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
30
[+] Show/hide bicluster #162 gene upstream sequences.
bicluster 162 upstream sequences
Mycobacterium tuberculosis H37Rv
15
upstream
[+] Show/hide bicluster #162 columns (arrays; conditions).
bicluster 162 arrays
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #162 ratios.
bicluster 162 ratios
Mycobacterium tuberculosis H37Rv
15x36
GENES Antimycin ARP4 Cap CCCP Cephalexin Cerulenin CPZ DCCD Dipyridyl DNP DTNB GSNO GSNO_CPZ GSNO_KCN GSNO_menadione KCN menadione mercaptoethanol methoxatin Nigericin Novobiocin PA_1 PA824 Palmitate pH5_6 Procept_6776 Succinate Tet TRZ UV Valinomycin Verapamil X_111891 X_121940 X_124196 ZnSO4
Rv0001 0.89285304412037 -0.702547119251213 0 -3.35647856757283 -0.0790270373841764 0.275017739100789 0.143995828508210 -2.58178182022364 0.984844186129042 -2.40894770310169 0.572116839016368 1.04441049030055 -0.352574035940033 -1.64764186998743 -0.00859687552822717 -1.83265461207892 -0.427557051736109 0.239249829330303 1.01885482721476 0.9899481873245 -0.478421780406359 0.224203259441224 -0.852318719846017 0.257537309690776 0.0283710311860127 -1.89790108284717 0.446457826499229 -2.06048930137791 -1.34604817385258 0.108010620977534 -0.523036750189125 0.801269555943944 0.578859028731995 0.412774583783734 0.479739984460456 1.48113793255089
Rv0176 0.642896311050699 -0.698771754188391 -0.184245694698104 -3.12799898188250 0.136693791095242 0.344289268914807 -0.106350004579328 -3.45145541712780 0.0507834149591959 -2.75720750843742 0.603407723009408 0.753373692204922 -0.497996480418377 -0.954156262652244 -0.38527603662946 -1.55114451959815 -0.984231706259447 0.432478397604496 0.781655444162652 0.344321886306126 -1.07758246486108 0.564683210862532 -0.662971777024231 0.389908141509892 1.31260815765576 -0.997920922404268 0.575181141809221 -1.19578481962511 -1.75926672055279 0.606447759925617 -2.51456623806632 0.517802146681305 0.522366675531472 -0.0457835084833367 0.378355977735207 0.638011630119041
Rv0482 0.70639199859926 -0.358390173529981 -1.12868237491993 -2.67329802222437 0.613086141468196 0.584746992557704 -0.721043405602443 -2.76514855519275 1.00261655952426 -2.41433240938092 -0.147945902127002 0.42864038984208 -0.662263965734731 -1.10617180521357 0.289378860911337 -2.58109186933483 0.739807343002511 0.059091215997669 0.0108014215772985 -0.795193357523236 -0.769868719100313 0.937648528790995 -1.54796232307525 -0.186262216576634 -0.110147659568502 -0.854718688313565 0 -1.63771370774718 -1.39977902867156 1.69386530615317 0.067983498171062 -0.396824887800257 0.878358187296743 0.306507777112248 0.726796960907066 0.00935430572691205
Rv0685 0.224700628841951 -1.33404490791563 -0.182760196117903 -2.5637955061351 0.685817783515141 1.00247334602357 0 -2.43176887215467 0.482444005381324 -2.29843858644075 0.782249545075671 0.969383644373275 -0.625223717873597 -1.29015889721768 -0.0539372578987511 -2.73761508428274 -0.100781709741715 0.858700719580564 0.915057625647108 1.3879054760764 -0.605412693918818 0.43776872985383 -1.50685796840092 0.497653806741019 -0.0412320930486902 -1.12680224872551 0.807315913287037 -0.560416980743915 -1.35246774872795 0.716098215027517 -0.205091552812148 0.885824342502041 1.05950549693797 0.0549602509200565 0.891068873852371 0.692281284050655
Rv0732 0.613812043195726 -1.06283122334733 -0.207163170559008 -2.58617342201645 0.518601925509349 1.05120930475882 -1.08584621665959 -3.11021224826816 0.0141002072093719 -2.79438821286992 0.730356681972905 0.74286909863547 -1.82588453856079 -0.894712097475392 -0.193956803466126 -2.23255556921053 -0.0852859045747105 0.359850227574445 0.529763269441455 -0.092144533036029 -0.605614750128961 0.577573363493462 -1.85839306190904 0.0403197946644887 0.465896785382989 -1.29702554519352 0.554544052155924 -1.56540817993613 -2.02230108072731 0.840847887899742 -1.23925906634294 -0.152745574457561 0.803421847996732 -0.464045293876446 0.506017719465832 1.18124371741197
Rv1612 0.76063202027233 -1.58376590360862 -0.504629614894428 -2.94167123428992 0.255696959769143 0.922488939390764 -0.730039263252646 -1.9173196314569 -0.0183478711286381 -1.61684811519591 0.40259660751216 1.30050147981057 -1.64385921514612 -1.26462896834858 -0.955772934700632 -1.20537347029941 -0.602309584241555 -0.0790065870988181 1.01957778199139 1.84905053649930 -1.38302947364812 0.263746311011645 -1.484464266683 -0.323989208472026 0.468473112925598 -1.62310611881017 0.16213200662791 -1.15441810231681 -1.65312293271155 0.61319834377944 -1.40531165348668 0.484098104525137 0.93741214976172 0.572999989745733 0.615357131776088 1.98685267503841
Rv2066 1.03727343898568 -1.55559007358222 -0.138826844614664 -3.52563470243594 0.117554768616172 0.0297217716899464 -0.440221233336286 -2.53293361392876 0.553894939001056 -2.21191206769830 0.284910772895061 0.720630424620577 -0.898941338958064 -1.04788814681033 -0.885937311773103 -1.46788897429092 -1.30067858922446 1.81415152577508 0.501058874880938 -0.377870570936914 -0.738622271095625 0.337574696474371 -0.996052273989286 -0.194820146126986 0.757265704374202 -1.45419759131278 -0.133501660294278 -0.598131084963139 -2.40479411566618 1.38689324307619 -0.708932154273677 0.40441757877071 0.632252611695308 0.719622989222193 0.53610224705509 0.962151287223357
Rv2200c 0.774769377151255 -1.19273772633971 -0.68336968492153 -2.50288717587646 -0.0532473566862592 1.09519221105041 -0.407487246748429 -3.37680265343890 0.577172201784095 -3.00199486352958 0.3252968961984 0.649735887383622 -0.895201831312987 0.66064542616781 -0.064590000506587 -0.978808132682106 -0.294222046128698 -0.108822176440567 0.432698778349889 0.913784420889327 -0.784904405999317 1.03031684354571 -0.0564173158176014 0.145272304622365 0.803829690031823 -1.13493279934323 0.719181189300037 -1.57978616597373 -1.80163228610969 -0.150409599560396 -1.38934687276928 0.446003075090918 0.753007366410073 0 0.718443907649729 1.29278684470007
Rv2271 0.452125025230298 -1.48956342824974 0.6890441634932 -1.75760354980420 0.590379754391955 0.977577938578035 -1.02823509323503 -3.03453339110575 0.698375386863109 -1.88930338815152 0.873064528842577 1.18497026218986 -1.64637388437156 -0.526874834798086 0.00165195855409577 -1.77016167638916 0.450386177434796 1.17755339182442 0.870987868346296 1.27564851992851 -0.971414645183763 0.722271627567629 -1.46816908027571 0.98626325434958 0.370658138906447 -1.62710886859568 1.19553952437888 -0.522243348894273 -2.05474109723941 0.474291386628643 -1.18905797473857 0.529274245318412 1.33481857156682 1.00253826325207 1.16994350231331 1.80154325232988
Rv2272 0.373161122054287 -0.920258012349037 0.969236124427561 -2.58461019181877 0.437871848025695 0.77875456781285 -1.09630889612449 -2.90985508436998 -0.166487377285635 -2.75958122913345 1.09606855491207 0.746997429455734 -1.59697436546571 -1.05456335414411 -0.0370513633889442 -2.13576711259849 0 1.40075500342415 0.940759425013963 1.09772648118619 -1.10557165317750 0.275882315476895 -1.94621885489903 0.44396641619223 0.056914960650036 -1.37669111528198 0.672928979645294 -1.23794810782290 -2.27974815165743 0.677572868022256 -0.108489746252512 0.612525810280814 0.869206906438325 0.219636591354217 0.820690839125363 1.51669660868627
Rv2844 0.447139491605524 -0.568372648002041 -0.246532500109034 -2.43921670746770 0.458928142780997 0.498605206337896 -0.525063059583356 -2.48332714626291 -0.403438653012939 -2.8213585024798 0.469485493701001 0.909505533768925 -0.953056599713746 -0.610359147043229 -0.358188828821089 -2.07517359079971 -0.359471143011422 0.674070088422516 1.19492871181991 1.33418203272994 -1.02246667978657 -0.309381774735938 -1.6525098375102 -0.0155640784262230 0.225150545956075 -0.189373744917966 0.833521577909724 -0.440841727547092 -2.19639590491188 1.43059917433563 -1.32319832214912 0.116444018938997 0.696879844303397 0.278262653330005 0.517949368048606 0.619328178120541
Rv2947c 0.69023958594019 -1.52903332475108 -0.612846270855583 -2.48558764786925 0.794073295614282 1.34274039670419 -0.473207985029647 -2.19762164847604 0.596701790288271 -2.15202277474510 0.955694972027054 0.637011836464051 -0.781929912271607 -1.86123394127122 -0.397322967721512 -1.93319630124899 -0.463784960447074 0.654393037851492 0.672084609316554 0.948966631155693 -1.54307496532453 0.65966903115709 -1.69036771133958 0.246643827944029 0 -0.99668405993168 0.62959982100213 -1.24517902506034 -1.52809976163408 0.957002793738315 -1.35104886217460 0.207724340014609 0.796859635538505 -0.347465911147768 0.614339036974078 0.244148451166340
Rv2949c 0.299270846272396 -0.449744472431936 -0.0827636116116535 -2.24692969897290 0.768781033918251 1.74164949440295 -0.762574280220003 -1.70545510231787 0.492213054213158 -1.49208107147685 0.579262046052309 0.38927999396119 -2.02443018219735 -1.45494019991918 0.245809184552963 -2.15868124769530 -0.158102050082385 0.139733025837660 0.65024093326866 1.05815130534578 -1.68330695543902 0.167063334504514 -1.41008977021414 0.462268568656941 -0.197432977017854 -1.21817421928366 0.71074997643594 -1.08126350763272 -1.17997485481858 1.04638236859969 -0.939870498100232 -0.0562772744654531 0.667551765742272 -0.493250874114133 0.467064194217238 0.460222817790167
Rv3584 0.36214186377296 -1.35520178834215 1.22254565293882 -2.77735403284272 -0.244399860306733 0.573617530197699 -1.07049143695176 -3.67574416237583 0.350850275423881 -3.61313205163252 -0.107955971262212 0.460871143094884 -1.49247202298439 -0.672775507354255 -0.307276812531903 -1.70256192540539 -0.298985989513506 0.108516816914308 -0.038382020783096 0.925593194895063 -1.09286493258569 -0.00951039904111381 -0.919344592080354 0.202519353727029 0.426035417404352 -1.70787384340069 0.102768309861524 -0.773081637324906 -1.97783199093067 0.287273388854535 -1.41039066241119 -0.343258505350516 0.0895095834155208 -0.203345662551900 -0.275112905277862 1.08586461351437
Rv3721c 0.270824415852833 -0.0156737251878478 1.60058068171329 -3.02488886632503 0.185177477507849 0.507412640009606 -0.635912397570503 -2.96623393466496 0.0707010273455647 -2.61875846861331 0.349488621487939 0.414906526603288 -0.669723806011667 -1.8817367254023 -0.048811607972274 -1.78828131573616 0.339614772258802 0.0124961865251113 0.703839652463433 0.0409558229971501 -1.37870429650021 -0.0294322930715343 -1.25320846915510 0.0927860832378331 -0.493404918272299 -1.44438346579315 0.432404584965953 -0.544469054203592 -0.815391880740465 0.575050746616 -0.405890019662448 0.146481507191464 0.382394804115124 0.208739061106954 0 1.47521673456403
[+] Show/hide bicluster #162 motif PSSM #1. bicluster 162 motif PSSM #1 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0 0 0 1
2 0 0.666667 0.333333 0
3 0.166667 0 0 0.833333
4 0.666667 0 0 0.333333
5 0 0.833333 0.166667 0
6 0.166667 0 0.833333 0
7 0.333333 0.666667 0 0
8 0.333333 0 0.5 0.166667
9 0 0 1 0
10 0 1 0 0
11 0 0 0.833333 0.166667
12 0 0 0.333333 0.666667
13 0.666667 0.333333 0 0
14 0.333333 0.166667 0.333333 0.166667
15 0.166667 0 0 0.833333
16 0.5 0 0 0.5
17 0 0.666667 0 0.333333
18 0 0 0.666667 0.333333
19 0.166667 0.166667 0.166667 0.5
20 0 0 1 0
21 1 0 0 0 [+] Show/hide bicluster #162 motif PSSM #2. bicluster 162 motif PSSM #2 Mycobacterium tuberculosis H37Rv 16x4
POSITION A C G T
1 0.6 0.4 0 0
2 0 0 1 0
3 0.8 0.2 0 0
4 1 0 0 0
5 0.4 0.6 0 0
6 0 1 0 0
7 0 0 0.2 0.8
8 0 0 0.8 0.2
9 0.6 0.4 0 0
10 0 0.8 0 0.2
11 0 1 0 0
12 0 0 0.8 0.2
13 0 0.6 0 0.4
14 0 0 0 1
15 0 0 1 0
16 0.2 0 0.8 0 |