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[+] Show/hide bicluster #161 rows and columns.
bicluster 161
Mycobacterium tuberculosis H37Rv
23x37
[+] Show/hide bicluster #161 rows (genes).
bicluster 161 genes
Mycobacterium tuberculosis H37Rv
23
[+] Show/hide bicluster #161 rows (short gene names).
bicluster 161 short names
Mycobacterium tuberculosis H37Rv
23
short_name
[+] Show/hide bicluster #161 rows (long gene names).
bicluster 161 long names
Mycobacterium tuberculosis H37Rv
23
long_name
[+] Show/hide bicluster #161 rows (NCBI RefSeq gene IDs).
bicluster 161 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
40
[+] Show/hide bicluster #161 gene upstream sequences.
bicluster 161 upstream sequences
Mycobacterium tuberculosis H37Rv
23
upstream
[+] Show/hide bicluster #161 columns (arrays; conditions).
bicluster 161 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #161 ratios.
bicluster 161 ratios
Mycobacterium tuberculosis H37Rv
23x37
GENES Antimycin ARP4 BZA CCCP Cephalexin Cerulenin Clofazimine DCCD Deferoxamine DIPED Dipyridyl DNP DTNB DTT EMB GSNO GSNO_KCN INH KCN mercaptoethanol methoxatin Mtm Nam PA_21 PA824 Palmitate Procept_6776 Procept_6778 Rifp TLM TRC TRZ Verapamil X_111895 X_124196 X5CL_PZA ZnSO4
Rv0270 -0.233312995895976 -0.370342423093946 0.975673158804052 2.31196340078027 0.00551505310231159 -0.74319949227458 -0.422344947041428 2.71805046183782 -0.488807549764249 -0.465374481690690 0.118662903939617 2.7992270117795 -0.663884322758048 0.200006919221350 -0.133292316024154 -0.308233003018104 0.574147209503276 -0.161830190512233 1.56954423419099 -0.48902461413268 -0.614225302072365 0.164372086075364 0.403413805329437 -0.428547839753938 2.68541382337121 -0.109045051028836 0.160823209008761 0.0397286260392796 -1.04757810107103 -0.849117733230046 1.29203030781850 1.09802085426193 0.0375343112466291 0.676963147632281 0.0607445941374048 1.62521488025588 -1.58546468489123
Rv0272c -0.176673730699332 -0.446980322689761 0.809634977827219 1.33383215631144 -0.95739344490046 -0.667431759991552 1.33407559038963 4.28053264636984 -0.182205440493754 0.462058386220656 0.388259597442264 1.98641495419314 -0.00302408825554555 1.06796199938359 0.0678962579899324 -0.52346601282254 0.402141217487206 -0.929943120333749 2.57939641147648 0.563479013191956 -0.363220452400050 0.283510045902971 1.10051099130797 -0.24253431384355 1.45262290481675 -0.459920517446601 1.02098256545430 -0.138825989059624 -0.719909964320474 -0.987591083954684 0.943692314865345 0.514017275221667 0 0.756763391689399 0.0556580899755975 0.982899525965895 -1.19820323649417
Rv0273c 0.147289040742755 -0.868771095320071 0.43029704902647 0.894652132261059 -0.371612651989201 -0.498940221261007 0.151655360630004 3.40295497798868 0.0311299047590924 0.218577298128768 0.228442954400143 1.65372485716576 0.100390089559478 0.150693145302801 -0.232243108774697 -0.66037062245167 0.524201144047346 0.461032538469893 3.06036272280311 0 -0.393014397460214 -0.734577921699394 0.226490382087180 -0.372758803296123 2.26520769513207 -0.326608960463406 1.14065064710316 -0.0434462833438872 -0.117583745942259 -0.168443639809055 0.859057674800069 0.602706959193461 -0.267034940207920 0.0205510764887929 0.115933724454513 0.731782816701892 0.0161719283307251
Rv0441c -1.07263845155975 1.12447953366254 0.419082730276618 2.63269566386189 -0.255197958487845 -0.196001097745060 -0.367409075729468 2.2575376141293 -0.235479443415399 -0.49071164250095 -0.168610565666823 2.32427486615059 -0.702088077124646 1.24994960942074 -0.198065062630649 0.110738262248115 0.249902958129546 0.334448679463761 1.00038062508329 -0.522960204821984 -0.815009120710297 -0.86992011466396 -0.222726553261456 -0.592702270378957 2.25376167195536 -0.805151337170805 0.751513477426348 -0.0553561679065004 -0.129035812399984 0.275021871382287 1.33657023964935 1.36840136455657 -0.097766430341176 0.59297891993785 -0.0758740831054322 1.07658406756286 0.421469237461811
Rv0938 0.0343242185817324 0.0921731602760786 0.678452745759667 1.36413096766549 -0.353765480949388 -0.718548638465277 1.30974454016090 3.2040700697894 0.0354028993275551 -0.435105675350701 -0.331217215590038 2.51722274580376 -0.178985629252323 0.935288198754793 -0.0229028632256105 0.0872276446710356 2.24551791746770 -0.509227076970386 3.75206623253226 0.460116404992562 -0.238010632120274 0.404813821833989 0.617901607151176 -0.40694939178414 1.59638467103720 -0.767198864916733 0.396096765408949 0.502684521903192 -1.19222381514543 0.460301660444928 1.13256133629120 1.63226955626225 -0.202282075334903 0.0596944913554052 0.116149946522505 0.458133671655755 -0.0630642935373687
Rv1765c -0.387369304458991 0.695246522905955 0.502252376193113 1.59993279799569 -0.202571805654781 -0.384604369622816 0.506769783036865 2.49145824779513 -0.109775988929810 -0.26477289217394 -0.485335449364531 2.67055904735019 -0.054946955292506 0.550262807671655 -0.35745336975935 -0.794174873695413 0.711290957386498 -0.404052941318434 2.71557718225634 -0.121120072232240 -0.750749359730447 0.511166809409123 0.328714269815789 -0.11467329864487 2.15497764509437 -0.852204235867684 0.923159982723784 0.316727875313099 0.0248421888697086 -0.200613650805272 0.89675513849654 0.936027770092718 -0.253500677025926 0.162127158909210 -0.247652297869225 0.32220629422536 -0.809757152239845
Rv2015c -0.294400026714495 0.268349439868339 0.540341808579683 1.42335134698366 -0.274931296736634 -0.20145932372344 0.340997120199264 2.21694045068518 -0.122722636861883 -0.102637811791036 -0.280325064324437 1.8794141273203 -0.192683644388138 0.0446345599167703 0.0386873092249344 -0.752408571889252 1.43769262071882 -0.398772345817041 2.81482347312909 -0.409806570930897 -0.646384204352045 0.390991241772475 0.438272693031045 0.0838098909961976 1.89451403092178 -1.04095241037139 0.74269356467654 0.279690422845388 -0.117191807540856 -0.117618662534967 1.05734424183376 0.473280093381377 -0.205232032855946 0.120045223584726 -0.249986678515702 0.683563982554627 -0.340574180376176
Rv2340c 0.0568807833740098 0.898477086414944 0.661864501211308 1.93662606920377 -0.337442129037709 -0.655509537617301 0.617859405363278 1.01618953554423 -0.415736512065769 0.368150884761844 0.0921573320623134 2.13176377134834 -0.827393917243393 1.18493092243125 -0.164608408032857 -0.76610214156698 1.80705693089364 -1.01292252832206 2.85882379537973 -0.484149949709862 -0.484481324260343 0.232694460236189 0.576528500745409 -0.781683669714829 3.19302170931365 0.252516584604876 1.49161494101121 0.120361524040998 0.101226522958532 -0.288029627553588 1.19495778730864 0.364040600225568 -0.960001420169375 0.450418254234285 0.145486452386214 0.369117149078520 0.28943906044398
Rv2373c -0.82486822783577 0.605377572502659 -0.0930531153578057 1.60222223515808 -0.423042409061349 0.136613119304869 -0.0199576785113081 4.18629568256001 -0.299874251537689 -0.167425545408695 -0.660116673975772 0.604767084398958 -0.628382145621995 0.230227525918824 0.0119673628712579 -0.308603718203826 -0.347482167127653 -0.0609126890784769 2.64454085598817 -0.596207048599132 -0.234398227761048 -0.434684725459128 -0.190974098620752 -0.567470167388393 2.03377507162993 -0.93993077200110 1.29790687572747 0.141111161910919 0.218746637330426 0.135758425175972 0.133028688423917 1.35454484633160 -0.206126834403669 -0.517884551511294 -0.633848178485704 0.0477692971834250 0.193586840870012
Rv2498c -0.188688645217323 -0.0436843959672321 0.386044760354637 2.11113248615733 -0.160596184448843 -0.0700138588866125 0.77220205167701 4.98280604235374 -0.106594259645152 0.0852963527119483 -0.0577625598524853 2.91170804444830 -0.280666583552138 1.40748839938904 -0.061024134762699 -0.406808412857059 3.01491270823737 0 3.25391173860384 0.00565987462921079 -0.462122424012898 0.0741331429023958 0.0698856642140639 -0.0059340377750645 1.77660936848721 -0.368511620822784 1.10261167296731 0.571696241610171 -0.638157323562368 0.0517948679015002 1.08738188176496 1.99855126749180 -0.0545809743656208 0.284713847123935 -0.127519375478976 -0.0629563814359598 -1.50286401675043
Rv2516c -0.251598022021851 0.66020967949927 0.828674391306511 0.483758608510988 -0.679786986037085 -0.336266838768685 0.125351825158792 2.89939582182894 -0.456115273856195 0.261075465151192 -0.283719856834885 0.5455426833414 -0.290289802183421 0.821517657145998 -0.327619052646181 -0.608084380734596 0.74974435826547 -0.60863740735923 2.58469089028553 -0.31101794791888 -0.425713768857661 0 0.670490199013874 -0.73338331589413 1.39544505505800 -0.336317313161996 1.49263266773536 0.147380182309790 -0.289841608762599 -0.325268949540168 0.859614815688598 0.634484132532735 -0.127960569547641 0.112656056665318 -0.155310693397851 -0.147560706632332 0.324601543718098
Rv2517c -0.731451151266946 0.873581731551787 0.631892327093206 0.970062143175327 -0.400364508599824 -0.0595102359484337 0.657220688888867 2.49979761119165 -0.315288518897147 -0.246870069189675 -0.182805103766615 1.07123208655304 -0.109389864404705 0.349560554418197 -0.247667010829217 -0.0869756218694275 0.327214123518037 0.196112512571012 2.27036904881210 -0.231030196884250 -0.0611920835612781 -0.946744119200278 0.598186486032141 -0.936829846616063 1.74569598799269 0.38530376865746 1.11796226053671 -0.117046278404832 -0.367256346320733 -0.0621011642336715 0.90161624578508 1.35271291884726 0.0599054386641091 -0.227550884699328 -0.332193341775911 1.29196673326179 -1.07842103967776
Rv2539c -0.473704925384823 0.253621982305816 0.502209869254545 1.12074878046111 -0.375391347162306 -0.329704288836755 1.04001508471311 3.23311057441730 -0.976446198726565 0.470854617572695 -0.505982126130689 0.91400946823757 -0.242767491253905 1.57169248079675 -0.0357739108171939 -0.730661926909144 1.44458081216243 -0.156179125865294 2.72840065366900 -0.147156397006834 -0.47952655022101 -1.42909596686047 0.0565793356803861 -0.766907376263139 3.65682396883921 -0.974525508645278 2.1416257656715 0.799093925385074 -0.431704431725487 -0.156992941095571 0.445701406305815 1.89612739899063 -0.220503076818353 -0.104491535301956 -0.405737113858167 0.445094179866915 -0.911912322916183
Rv2634c -0.697141917643675 1.09908767796755 -0.136184007733417 2.23576510421254 0.471500043109963 -0.631795049103526 -0.084608703115031 2.82565059203692 -0.459501101357821 -0.393000232319974 -0.648593974736377 1.56642290281033 0.0102738974272655 1.06772067326269 -0.0471896039378387 -0.470010797867113 0.6693207635879 -0.249576528238297 2.57500701512399 -0.179437526505358 -1.14753499995904 -0.690615700926146 0.0555869422590308 0.133012564865021 2.31388810850098 0.396418152797076 1.43229193976887 0.4643623140952 -1.22137763513657 -0.709964185977258 -0.85507222965783 1.46230232438665 0.143882067092444 -0.504947904409487 -0.617294451232456 0.808550290987695 0
Rv2650c -0.450340688754867 0.0441071512907482 0.764677865418054 1.43108351418173 -0.0110501152919428 -0.251409219265811 0.162300205871253 3.40944941545592 -0.240838693551886 -0.306353993853134 -0.424099858837117 1.31559068501902 -0.16599025119414 0.975209882985739 -0.586641873324626 -0.126177843748525 1.29115913629794 -0.369676005206646 2.15080184138295 0.183322158673742 -0.573035181705316 0.0437339670526584 0.237857998738515 0.286861090395157 1.52485307299822 -0.60081230486588 1.75926665101224 0.516296035886681 -0.152422155676481 -0.210604770531362 0.512498325773366 1.36768874868858 -0.364732821923482 -0.00804833438434235 -0.0436277004757178 0.439393067568151 0.288722251309579
Rv2651c -0.37501350542556 -0.617050392509674 0.0621370661189825 1.28813992340086 0.048547689078468 0.285518503184204 0.231157252436074 4.77371596550822 -0.296304210846734 0.0408947369376493 -0.0333322856649438 1.85103316911193 -0.691321784937836 0.77271700076157 -0.498888290887393 -0.295243311530779 1.10845661287462 -0.202936162908119 2.32409614153923 -0.382633448507600 -0.494547351986921 -0.120510084773562 0.337707383376796 -0.378532840046957 1.16144280378896 -0.57136650873724 1.12776620479186 0.243007443766294 -0.200555987095512 -0.232411840900906 0.306440081043552 1.16512463131559 0.227382318907893 -0.0184530476618155 0.116191627761914 -0.161220149626327 0.245678367147898
Rv2925c -0.412640126119493 0.387146841047158 -0.170661397087446 2.52755695123099 -0.232125804046722 -0.525497073537237 1.00489279114123 3.08490963765273 -0.768344544703631 -0.168067581059526 -0.150096653676523 3.5920612057094 -0.485162534518504 0.923144859825925 -0.177866861563354 -0.553225296617006 1.71200320121871 0.074976890070064 3.40660675147411 -0.119792766330034 -0.213278576492988 -1.00361388179996 -0.231207878543427 -0.0264500859849781 2.50581818111723 -0.625658480497075 1.41894782249538 0.543864216661052 -1.02322676622211 -0.173777064626469 0.990797394616091 1.85793847377158 -0.355681921377264 0.0223902331604334 -0.680798819297536 0.276610199459355 -0.633427106567722
Rv3182 -0.319195626259799 0.534432676976187 0.854336928025791 0.58455469713924 -0.139857446396314 0 0.86644188186391 3.34489845944169 -0.350470121855217 -0.384225497804033 -0.349251743392557 0.987988548619983 -0.334367394972132 0.648745752630277 -0.0838638092075787 -0.245321919529283 1.17581712741797 0.087043352946499 2.73098195051351 -0.299233318578318 -0.151755965333792 -0.446414922648144 0.622395438352717 -0.227501957940468 1.92094175481761 -0.176568822265162 1.52132004566532 0.00343428104359591 -0.20697702684277 -0.526458574590914 1.10972765524203 2.09424162837415 0.191781735402683 -0.0146955235895735 -0.268319262565836 1.08891242601006 -1.16798182191686
Rv3606c -0.586082376662391 -0.817291931081472 -0.686917392638348 1.42324365691863 0.295542251736244 -0.351273348244693 1.52607013015240 3.72408441982093 0.222646419149175 -0.193700190618737 -0.172657405068708 0.391823855958485 -0.374382043977551 0.451359966747133 -0.190063352994745 0 1.80836694787744 0.202285205094494 1.97734476891881 -0.41637795551668 -0.311750440507449 0.0381567713687385 -0.00236832778885406 -0.568242822342405 1.83084434864429 -0.189570424238161 1.28641437583970 0.789818673806902 -0.887634905721603 0.0211467123541365 0.469023763569226 0.0880694606545031 0.127696681326608 0.389796717913809 0.277933533296387 -0.0152487091753225 -0.216221165376636
Rv3607c -0.781547221755272 0.306652199494112 0.27107365890874 1.58014647217404 -0.129315205684105 -0.76489254915522 1.19542153849470 4.75953691815657 -0.189827151051860 0.612733055921699 -0.375645191817316 0.276606967673112 -0.717887437774807 1.59759188026674 0.470858922462731 -0.413240720557383 1.32394505631311 -0.0323837103829593 2.13797322136542 -0.370182782683784 -0.867336685940208 -0.0819941835237274 -0.136271895993623 -0.428172986664599 2.55093330820743 -1.26432940055740 1.06951390565411 0.276684415008927 0.609737991856855 0.33101350402291 1.12371079205128 0 -0.406747508372256 -0.0870377874475352 0.065689877640937 0.609130387943438 -2.13828350989126
Rv3610c -0.99580015098249 1.63269983748537 1.96782139115446 2.27486413656579 -0.497374476688671 0.229821541495618 0.894521020044583 4.13821801891714 -0.489966559251528 -0.176557811872598 -0.816672090025615 0.817527680256508 -0.373434695890069 1.39349470994629 -0.170771492708379 -0.79458183969893 1.49982495300527 -0.090123076487847 1.65299559715043 -0.502612720155447 -0.369876681095424 -0.141486591845389 0.119844530235485 -0.705158969789088 1.07561329404431 -1.09753169958133 1.82368217197994 0.0623748140695939 -0.754207353637603 0.157834894042282 1.23370582828939 1.48864399313531 -0.105581489789356 -0.00574179053642933 -0.0619926966529559 1.59014211195319 -0.478419742425264
Rv3627c -0.311676851585072 -0.103982061412295 1.75483636005559 1.83509985665277 -0.0218076567875931 -0.262744300795564 0.807184364172458 3.29833429571419 -0.243844040566147 -0.40831625290505 -0.352108258538842 2.76299719463271 -0.86992796537496 1.05334478927678 -0.381856861624266 -0.39719182394847 1.46567842599322 0.72468023064929 2.66128259960986 -0.893018928348744 -0.720862218737502 -0.0600163933853884 0.84033585174802 -0.584093526489493 3.08623599312427 -1.15675815431263 1.54267619463078 0.0451158303509471 0.166851910171201 0.471349352635709 1.02416379270726 1.04399527080209 -0.415341602287949 0.235690262706168 -0.148981501338808 1.32820013084237 -0.623042091763187
Rv3870 -0.119261950667495 -1.34462509789055 -0.211493033390841 0.979161908601455 -0.107553825866022 -0.25136986329876 0.156940231164443 2.31387182677801 -0.050112965936789 -0.422668058546686 0.207713972919935 1.66921337395443 -0.108952271997370 -0.366464867799485 -0.120940052000523 0.0907807447871814 1.03114244114792 0.0158328890919603 2.80504397166031 0.0155326630115180 -0.257083412223243 0.156970704705962 -0.0820804690058228 0 1.52408395401578 -0.451295220222368 1.07812494356783 0.0782106597883171 -1.02978166540466 0.081935993710757 1.24629678086081 0.730200006367131 0.381267870274182 0.0795370577761708 0.108771794165107 0.704662484085417 0.0708533399102059
[+] Show/hide bicluster #161 motif PSSM #1. bicluster 161 motif PSSM #1 Mycobacterium tuberculosis H37Rv 22x4
POSITION A C G T
1 0 0 0 1
2 0 0.8 0.2 0
3 0.8 0 0 0.2
4 0 0 1 0
5 0.6 0 0 0.4
6 0.2 0.4 0.2 0.2
7 0.2 0.4 0.2 0.2
8 0.2 0.6 0.2 0
9 0 0 0 1
10 0 0 1 0
11 0.4 0.6 0 0
12 0.2 0 0 0.8
13 0.2 0.2 0.4 0.2
14 0.2 0.8 0 0
15 0 0 0.6 0.4
16 0.8 0 0 0.2
17 0.4 0 0 0.6
18 0.2 0.2 0.6 0
19 0.8 0.2 0 0
20 0 0 0 1
21 0 0.4 0.6 0
22 1 0 0 0 [+] Show/hide bicluster #161 motif PSSM #2. bicluster 161 motif PSSM #2 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 1 0 0 0
2 0 0 0 1
3 0 1 0 0
4 0 0 0.333333 0.666667
5 0 0.666667 0 0.333333
6 0 0 0 1
7 0 0 0.333333 0.666667
8 0 0 0 1
9 0 0 1 0
10 0.333333 0.666667 0 0
11 0 0 1 0
12 0 0.333333 0.666667 0
13 0 0 1 0
14 0 0 1 0
15 0 0 0.333333 0.666667
16 0 0 1 0
17 1 0 0 0
18 0.333333 0 0 0.666667
19 0 0 1 0
20 1 0 0 0
21 0 1 0 0
22 0 0 1 0
23 0.333333 0 0.666667 0
24 0 1 0 0 |