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[+] Show/hide bicluster #159 rows and columns.
bicluster 159
Mycobacterium tuberculosis H37Rv
24x37
[+] Show/hide bicluster #159 rows (genes).
bicluster 159 genes
Mycobacterium tuberculosis H37Rv
24
[+] Show/hide bicluster #159 rows (short gene names).
bicluster 159 short names
Mycobacterium tuberculosis H37Rv
24
short_name
[+] Show/hide bicluster #159 rows (long gene names).
bicluster 159 long names
Mycobacterium tuberculosis H37Rv
24
long_name
[+] Show/hide bicluster #159 rows (NCBI RefSeq gene IDs).
bicluster 159 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
40
[+] Show/hide bicluster #159 gene upstream sequences.
bicluster 159 upstream sequences
Mycobacterium tuberculosis H37Rv
22
upstream
[+] Show/hide bicluster #159 columns (arrays; conditions).
bicluster 159 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #159 ratios.
bicluster 159 ratios
Mycobacterium tuberculosis H37Rv
24x37
GENES Antimycin Clofazimine DCCD Deferoxamine DIPED Econazole EMB GSNO_CPZ GSNO_KCN GSNO_menadione H2O2 KCN Levo menadione methoxatin Min_med__succinate_ Mtm Nigericin Novobiocin NRP_1 Oflox PA_21 PA824 Palmitate pH4_8 pH5_2 pH5_6 Procept_6778 PZA Rif Rifp Succinate TRZ UV Verapamil X_111891 X_124196
ORF01176 -0.0376421945781746 0.512824485868314 -0.647187632263909 -0.122554683728192 0.119941997956888 0.0119833658484769 0.167389257452291 0.0480252865280606 -0.362023507867693 0.283107920952539 -0.234086961750543 -0.0910313712825765 -0.0260148964727486 0.472716122503922 -0.0665024099128339 -1.01128729241771 0.13065114759365 0.737582135659945 0.258398088435557 -0.509551401916397 -0.0428215336041193 0.174345560924010 -0.0131489794107325 0.494600469651357 1.17067477609186 -0.0619568052832184 -0.460301656492584 -0.299004190705305 0.970784102567343 -0.415237620124907 -0.66744426563529 1.75335870155731 -0.613700207165726 -0.0221071273263644 -0.629944839724927 -0.100840770226651 -0.0608417553675016
ORF06092 0.151576789467332 0.214701979597647 -1.26322293938731 0 -0.162376253981730 0.568965489027172 -0.270681339714592 0.73824558607732 -0.119014412551609 -0.340167537460690 -1.11250232630148 -1.00282906343496 -0.0552951234302104 -0.623884359793812 -0.188141813535810 1.01129679628401 -0.812566027649599 0.378180760881246 0.3064065707512 -0.0038185733347684 -0.137853850164107 -0.34094218583563 -1.30930081279943 0.368039145463018 -1.33435848448903 -0.89016217314767 -0.859761618557606 0.208553378269185 -0.286204558801498 -0.913535137220402 -0.0528123598095939 0.313534998724681 -0.119050014019975 -0.0684324364351686 0.590534874867403 -0.0536251868221765 0.549306303162838
Rv0047c -0.201342718267667 0.196150341588534 0 -0.363759572592390 0.0418484431315511 -0.440603712003651 0.765217842052776 0.63576829049532 1.32956565143918 -0.442733354395978 0.496366498401658 1.60628029416932 -0.229199703571196 -0.31870853771765 0.132109221830135 1.07741084209772 -0.147907463006566 0.207830516989683 0.0350654191917526 -0.475544019041243 -0.212539568955798 -0.977497712824576 1.58117865641687 -0.0444709943033704 1.24043119370203 -0.406918076677929 -0.741482566420294 0.219254165675375 1.69636712592438 -0.549625782754886 -0.204413401490802 -0.194240650165439 -0.323311909107227 0.329114275457224 0.958996615447804 -0.752060353795135 -0.55844666775
Rv0179c -0.730816693294488 0 0 -0.313430363207727 0.0881239371383003 0.345509209112538 1.15892087842795 -0.246595981452596 0.462262258680097 0.528587065513161 -1.04770372165333 0 -0.261913895794583 -0.522594314947896 -0.0678395141826154 0 -0.341096906040252 0.585628753179838 0 0.85305100350891 -1.16065421113023 -0.642061326859688 0.56604468028964 0 0.911339589343688 0.666904752556948 0.20530317270512 0.0917577025255018 -0.376175219361072 -0.80841621675446 -0.2466298223918 0 0 -0.624669405278114 0 -0.466825082501458 -0.522165965664878
Rv0263c 0.0744877024741755 0.713693991773476 -0.306735149051477 -0.318871520140699 -0.193109811474315 0.545383789049168 -0.294788056281516 -0.120840305586715 0.937404647397609 -0.724797832391269 -0.850017658344056 -0.213356338635741 0.0859220106111625 -0.280630367449507 0.120372229779365 1.65899064725796 -0.908326004974619 0.68615617834469 1.31249494156463 -0.0200213007419809 -0.592898269323953 -0.332669056021178 -0.578192174065294 0.868935177775999 -0.595420198049919 -0.572176357089422 -0.548174593128326 0.465260817915878 -0.166994407991273 0.131483455801098 -0.0363158548679767 0.379083192081132 0.585859938277873 -0.0501851648860184 0.586365406393835 -0.376187536052947 -0.017687785018761
Rv0264c 0.680774484239968 0.470047128038645 -0.292217707691660 -0.188484828080361 -0.371528268344767 0.078080794643508 -0.182704986156395 -0.570319741453264 0.728493101014476 -0.640982926083373 -0.134720979209706 -1.19919616947998 0.32235562738148 -0.350006634162400 0.152479455633122 0.160976384235135 -0.209334657147363 1.56393355201308 0.869550883569233 0.0210580055228661 0.356254198356384 -0.731032352703841 -0.382168582697985 0.477182349045327 -0.00486489214849169 0.316129805623995 0.039831479206627 0.0650351424209772 -0.346356721831089 -0.289879937768854 -0.304992027440066 -0.127051243746839 0.0950643187643265 0.141005439322295 0.414294746088021 -0.352012778226383 -0.212954088886610
Rv0516c 0.416666400223903 1.11887656133014 0.676660891911739 -0.177507364058651 -0.233282084153353 0.720563929319212 -0.283596153316904 1.07538515169947 0.512030388646827 -0.503589126335572 -0.473898920014523 -0.224407732475486 -0.086675970775871 -0.565616159239193 -0.244645556673106 1.08025313320009 -0.527037444015223 0 0.109912835415995 -0.522539547225944 -0.273489545878436 -0.239841067406038 -1.67968265498939 0.624573847334962 -0.46284287199754 -0.293068022279948 -0.239894966333378 0.749412441714891 -0.375539372853628 -0.386727573201958 -0.149734044380676 0.0220431124355442 0.734523404726216 -0.163720216734677 0.518594667767605 -0.178743646121955 0.528232149266598
Rv1013 -0.648619218301185 0 0 0.40858848216134 0.325883748719726 -0.389967258881502 0.48565638307725 0.833237754734105 0 0.330856700798054 -0.0947768678473928 0.922755496555754 0.495628295763517 1.15810647942641 1.11526752222024 0 0.341534118434274 0.477585359720762 0 0.876182367876509 0.0169224072764538 -0.648748678128676 0.126710052889182 1.86025047759218 1.29242765854845 0.313156980166351 0.622884978782065 -1.53789622435697 0.140030097894337 -1.04487943902983 -0.0352086793083562 0 0 -0.145355438023247 0.685085760096354 -0.244934872745132 -0.73030158882838
Rv1187 0.154827882541804 -0.341697911756157 -0.172164779680498 -0.615165277192356 -0.503992390378071 0.256483028598548 -0.432704242144894 0.525485363758716 0.0708389804292412 -0.213417080740149 -0.484396383546844 -0.583857028551663 0.08349878454107 0.0353315708574115 0.171900057281193 0.932018575168422 -0.79446224277027 0.765001124382267 0.48710707054871 0.720874965245935 0.227264615984206 -0.175241828430619 0.761879924139045 0.106018778722643 0.807957020643596 0.171753514946727 0.455237625241131 -0.703009474649687 -0.167578342651921 -0.777358722126164 0 -0.69963601206669 1.18261924171936 -1.49032197786845 -0.0639844565269033 -0.974172530489507 -1.25059647860260
Rv1462 -0.687118380649713 0.0378141708988841 0.0378141708988841 0.292807776082074 -0.297150926513075 -0.525015617336522 -0.184453111058482 -0.141352929876802 -0.164521120963447 0.707831320449548 0.841130215639897 0.0378141708988841 -1.01955173859146 0.0378141708988841 0.0378141708988841 0.0378141708988841 -0.252046638249197 0.0135492740188592 0.0378141708988841 0.335191368476277 -0.635942623542903 -0.332915147778008 -0.0379995540614531 0.0378141708988841 -0.427015577806202 -0.356089299304481 0.146693361506902 -0.0291744954811235 0.0329218069398187 -1.79588908388922 -0.75487621619763 0.0378141708988841 0.0378141708988841 -0.0159964968739066 0.0378141708988841 -0.560818873153146 -0.506076681646692
Rv1522c -0.304137190929370 0.489090048162257 -1.37034143518832 0.0129404282704267 -1.22160652749828 1.15212975771522 -0.344085448798891 0.931699440824054 -0.177769421870291 -0.688594256137812 0.112237590302854 -0.621868859899809 -0.000696487336238584 -0.307613356624013 -0.111134664420465 1.78369658223201 0.441570784621682 -0.319875804646031 1.80139202505633 -0.554547439864074 -1.24388384422766 -0.167035581176778 0.357935861708891 0.0174244268776499 0.752353354125582 0.955527313949064 0.5338295940356 0.21416081916221 1.55364378473024 -1.61992520494765 -0.446898839592634 0.00218065971929767 -0.211536051983425 -0.0588359829138815 0.298691079262345 -0.155973471227841 -0.444878411257216
Rv1646 -0.100350638934614 0.821160650130022 -0.0438280634649691 -0.188724999143016 -1.06369055336628 0.235688040248922 -1.15161495956807 -0.0821173290091988 0.936039524060794 -0.287790888568224 -0.34502876632713 1.04424598345677 -0.35290348649785 -0.69657500025735 -0.467905959754601 1.61023402150593 -0.837403453576007 0.526826918570219 -0.740714277042289 -0.282119530154441 -1.38064709724114 -0.296699486483907 0.91136572846932 0.741131703774 0.617578795163467 -0.0740866640748536 0.255931266643915 -0.30064238976424 0.720410804556327 -0.810492871131266 -0.232267714500601 0.42916384558201 0.387103533417087 -0.710407479332333 0.280118730550075 -0.491907048433048 -0.441774846555832
Rv1665 -0.39096920095424 -0.00700129979318266 0.593621274133885 0.205591522171596 0.519215166022112 -0.759763375464812 0.622378784524351 0.326712050409582 0 0.248605522124710 0.821055076841057 0.110911742089698 0.15803275448562 -0.125504257166572 -0.734140371740383 1.63235587248242 -0.0769038640322847 0.849156120530773 -0.0614220685375906 -0.306437236775878 -0.0870865215246948 -0.48292352352688 -0.205476741591979 0.652863411014655 -0.130302435895440 -0.404766897286044 0.0258259809147695 -0.291198980775427 0.241012164390413 0.544350964532663 0.430090621736105 0.293519240129336 -0.147343076647015 0.391917268593760 -0.0500978252305367 -0.191891126456821 -0.0503136537434693
Rv1687c 0.0135666757218217 0.400856908414037 -0.00111680562405458 -0.209994366886469 0.0118345368788647 0.046746117747333 0 -0.129378198360422 0.607295287181451 -0.0224501253346843 0.243672922875092 0.711200151321384 -0.0394191705510936 -0.0337900583603326 -0.174151996884424 -0.0924537668791853 -0.193421207877863 0.5542724660351 -0.709259297047588 -0.326790256282909 -0.0803267892688807 -0.184274074957576 0.770647866060676 -0.12698967797366 -0.263226123617352 -0.325425963851798 -0.147494577584989 -0.0682748013579721 0.747046137439049 0.301555915315703 0.158017964214896 0.222076923320000 -0.419031034803515 -0.0582461840006308 0.44859061251492 -0.159144859202915 -0.245573726205354
Rv1888c -0.83286662849974 0 0 -0.983382210659627 -1.53604432137722 -0.503306036939374 -1.35711082762747 0.690945139658402 0 0 0.065356609549211 0 0.10308908950546 0 0 0 -0.0805229330704605 0.821571797400359 0 0 -0.440709002360234 -0.034634399659407 -0.215492668238079 0 -0.0376799385752 -0.252759327635336 0.389280440384987 -0.608214688497214 0.468798336356773 -1.20290364216260 -0.387259500089064 0 0 -0.591285788820177 0 -0.913726715877304 -0.192943205940478
Rv1986 0.108419588088898 -0.0143453775496421 -0.556955181609007 -0.789884495450343 -0.369628382032191 -0.768737436523029 -0.208370280206943 -0.0985908290016202 -0.0651704040998964 0.199190017606713 0.227351051114145 1.40475857709600 0.096775404142894 0.00349136254736324 -0.0341101643014198 1.48147809107305 0.0133595007922848 0.525852536871456 0.585858060683588 0.331351714445792 -0.0488921569217266 -0.662473964774389 0.649392600083803 0.59064603600805 -0.161723774325630 -0.468424280493344 0 -0.337577505680737 -0.0538610135051803 -0.0814812094534121 -0.00309942457229701 0.696302940116336 0.330438354906457 -0.353196799262214 0.638344744407439 -0.265755209922108 -0.341999491193028
Rv2022c -0.127688049028705 0.837741539991376 -0.635522149423764 -0.0272559109940310 -0.348285166850168 0.119060372709484 0.556212427232589 0.2764857753496 0.306790622827213 -1.11287685352657 0.0123347317984746 -0.128929365569666 -0.248618755352854 -0.4583402850536 -0.449015829257545 1.70666372609137 0.147643917634448 -0.00800638390860408 -0.879076353870016 1.43678312071935 -0.267798985787680 -0.768321169346186 -0.319427887089253 0.0737024216594007 0.921443968327677 0.339692144082677 0.184105291396113 -0.452424274418362 0.32284535539058 0.0770397595020842 -0.378385528523851 -0.502151914417197 0.389235351507604 -0.130925377397046 -0.0907237951704332 -0.591718236593253 0.330061983960947
Rv2136c 0.0239021491766584 1.27453783576584 -0.523112801578599 -0.179152137204439 -0.437068788578896 1.07608103091068 -0.00307298942965368 0.319010287634419 0.0599875145724578 -0.431988928296222 -0.0433201479268563 1.55067596874473 -0.205195228606771 0.198244809152764 -0.0222106293462272 1.64443821262812 -0.0428378253463689 0.734850488690574 0.239363681556550 0.859874092438475 -0.369600736091039 -0.573021333222286 0.762174158262467 -0.129569710965513 0.161655233784176 -0.0563249744511408 -0.352463842692214 0.416506134601141 0.217746944202939 -0.304514797230827 0.101347128068104 0 -0.413961690697751 -0.0524504105392944 0.94370002759737 -0.0445897301563499 -0.334306104283828
Rv2487c -0.789746677755706 0.686054398897658 -0.0992552713395927 -0.382329534883233 -0.331719404767187 0.039171011835763 0.24879616591049 -0.0428492253262155 0.503594562597154 -0.543096082256601 0.140342654950106 0 -0.573997234604513 -0.560408572221386 0.186330531927637 -0.538419850329648 -0.357280094788587 1.13191928448182 0.459053110333725 0.0694045983380812 0.378574719667996 -0.792452972342469 0.387346759656046 0.0948084375009695 -0.107259873370032 -0.98226079728294 -1.31541060721323 0.18604946664487 0.769290543710258 -0.71089439937024 -1.22229653436251 0.322267112782919 -0.280227979437801 0.440519114774082 0.182964791736335 -0.453223311173335 -0.325142936196185
Rv2784c -0.269259670072904 0.131289715825394 0.131289715825394 -0.195205467972488 0.125476360574107 -0.765401495213018 -0.0807888023362795 -0.216222426759985 -0.403124340012449 -0.357324188760952 -0.175269025683818 0.131289715825394 -0.158329433686022 -0.330976318325328 0.244776190307658 0.131289715825394 0.42090908541215 0.617902083276985 0.131289715825394 1.26784501957699 -0.086821783161085 -0.0515066877021312 0.197110362120209 0.131289715825394 -0.741040677536189 -0.484098174429253 -0.624047037579682 0.155043802885449 -0.0221736181486841 0.196635851912527 -0.290261309052812 0.131289715825394 0.131289715825394 0.0718199609343665 0.131289715825394 -0.0338064715308702 -0.48024137440906
Rv2832c 0.0130066069788333 0.0841421311253626 0.0841421311253626 -0.0237132653222578 -0.36654712412847 -0.296130682536601 -0.349829121530804 1.71064563829017 0.0841421311253626 0.0841421311253626 0.246035679453217 0.0841421311253626 -1.06535906939736 0.0841421311253626 0.0841421311253626 0.0841421311253626 -0.367576072265639 2.13034588369334 0.0841421311253626 1.05483252818127 -0.58524684681857 0.208729908680246 0.152744407349049 0.0841421311253626 -0.316921747160906 -0.220276832833727 -0.713741665971578 -0.412034744245937 0.468953348789943 -0.810572350581139 -0.724876103839866 0.0841421311253626 0.0841421311253626 -0.630809092894592 1.69128751680603 -0.232947316549092 -0.366489297480313
Rv3049c -0.575456719075145 0.0405566412253247 0.0405566412253247 0 -0.307313016866573 0.311838194705878 -0.123776739156709 0.0405566412253247 -1.21435760052085 0.0405566412253247 -1.20121913580489 0.0405566412253247 -0.635133112006991 -0.976128309137347 0.0405566412253247 0.0405566412253247 -0.354611168165982 -0.42444136105935 0.0405566412253247 -0.741892577626803 -1.00027230924200 -0.298650828740313 -0.213115499445226 0.0405566412253247 -0.254443824940514 -0.353673943422975 -0.387226246174366 -0.53607784550859 0.515382298765078 -0.377425037972542 -0.446693683344003 0.0405566412253247 0.0405566412253247 -0.680177406652325 0.0405566412253247 -0.0559728733409193 -0.475570122897856
Rv3160c -0.616167801805954 0.272252736424938 0.272252736424938 -0.460686132188461 -0.0311096462647966 0.323698161325586 -0.157736647708041 0 0.0424375153659267 -0.0667733975843478 0.09606698111164 0.272252736424938 -0.861368577956608 0.548535624423426 -0.522880425910199 0.272252736424938 -0.139654257488499 0.267102431129667 0.272252736424938 0.290054958364422 -0.478069152309396 -0.6121365673652 1.08132600556271 0.272252736424938 -0.418303577054951 -0.255736941836801 -0.355223187895019 0.46000780559933 -0.0565340225046296 -0.00185815605219721 -0.680713656558818 0.272252736424938 0.272252736424938 -0.467880694023363 0.508101917044398 -0.407122009923632 1.67518685628586
Rv3450c -0.152887529770936 0.086491446489336 -0.788498959922504 0 -0.272948379652580 0.125444979298880 -0.232007953365382 0.701662128152094 0.393849359475894 -0.314810576555222 0.197396149126002 1.40641155093944 0.105525359043870 -0.558466185179159 0.356225787632841 1.86674468529067 -0.336892601286709 0.6075973641937 -0.250208591636251 -0.458142939193431 -0.431869959480057 0.189901180005399 1.90615254360950 1.37858719013922 -0.358343324413484 -0.511783073708937 -0.534809779237695 -0.254663563416247 -0.227057286623846 -1.23825539149441 -1.88129371466247 0.97683820848872 0.139029266227536 -0.694134903237498 0.575011911631391 -0.108811944686909 -0.153876227371912
[+] Show/hide bicluster #159 motif PSSM #1. bicluster 159 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0.333333 0 0 0.666667
2 1 0 0 0
3 1 0 0 0
4 0 0.333333 0.333333 0.333333
5 0 0 0 1
6 0 0.666667 0 0.333333
7 0 0 0 1
8 0 0 0 1
9 0 0.333333 0 0.666667
10 0.666667 0 0.333333 0
11 0.333333 0.333333 0 0.333333
12 0 0.333333 0 0.666667
13 0.333333 0 0 0.666667
14 1 0 0 0
15 0 0.333333 0.666667 0
16 1 0 0 0
17 0.333333 0 0 0.666667
18 0 0.333333 0.333333 0.333333
19 0.666667 0.333333 0 0
20 0 0 1 0
21 0.333333 0.333333 0.333333 0
22 0.666667 0 0 0.333333
23 0 0 0 1
24 0 0 0 1 [+] Show/hide bicluster #159 motif PSSM #2. bicluster 159 motif PSSM #2 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 1 0 0 0
2 0 1 0 0
3 0 1 0 0
4 0 0 1 0
5 0.2 0 0 0.8
6 0 0.6 0.4 0
7 0.8 0 0 0.2
8 0.4 0.6 0 0
9 0 0.2 0.6 0.2
10 0 0.8 0 0.2
11 0.4 0.2 0 0.4
12 0.4 0 0.6 0
13 0 1 0 0
14 0.2 0.4 0.2 0.2
15 0 0 1 0
16 0.2 0.4 0 0.4
17 0 0 0 1
18 0.6 0.4 0 0
19 0 1 0 0 |