|
[+] Show/hide bicluster #154 rows and columns.
bicluster 154
Mycobacterium tuberculosis H37Rv
27x37
[+] Show/hide bicluster #154 rows (genes).
bicluster 154 genes
Mycobacterium tuberculosis H37Rv
27
[+] Show/hide bicluster #154 rows (short gene names).
bicluster 154 short names
Mycobacterium tuberculosis H37Rv
27
short_name
[+] Show/hide bicluster #154 rows (long gene names).
bicluster 154 long names
Mycobacterium tuberculosis H37Rv
27
long_name
[+] Show/hide bicluster #154 rows (NCBI RefSeq gene IDs).
bicluster 154 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
50
[+] Show/hide bicluster #154 gene upstream sequences.
bicluster 154 upstream sequences
Mycobacterium tuberculosis H37Rv
26
upstream
[+] Show/hide bicluster #154 columns (arrays; conditions).
bicluster 154 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #154 ratios.
bicluster 154 ratios
Mycobacterium tuberculosis H37Rv
27x37
GENES Amikacin ARP4 Ascididemin_Natural_product CPZ Deferoxamine DIPED Dipyridyl DTT Econazole EMB Eta GSNO GSNO_CPZ GSNO_menadione Levo menadione mercaptoethanol Min_med__succinate_ Nam NaN3 Nigericin Novobiocin Oflox Palmitate pH4_8 pH5_2 pH5_6 Procept_6776 Procept_6778 PZA Succinate TLM X_109 X_121940 X_124196 X_241 X_59
ORF00796 -0.642533941572964 0.876331689766018 -0.572306364993108 0.578721165482722 -0.426882710792527 -0.489312511974549 -0.664332224085509 1.09685074409036 -0.157608833716271 -0.0166208569741452 -0.0158094673950254 0.500051340390156 1.26197356138363 -0.124761145874619 -0.67142425496863 -0.32426177799747 -0.196683453217989 0.177358558303833 1.28221201738882 0.9976200243493 -0.929533349247986 0.102639402022282 -0.77677819177411 -0.241382275876358 1.85576166495494 0.337950240009393 0.333630208605687 1.89171885761463 0.405040567254941 0.78318818094158 -0.575648933561546 -0.0302017357051982 -0.452074787088081 0.377941322116069 -0.248484806185234 0.0382296591353918 -0.511282808938408
Rv0015c 0.0698717416576007 0.36669386208317 0.007378084494728 -0.125826388777476 0.193515216551608 -0.309490281045033 0.00619916911370573 1.17727543790082 -0.137152830662791 -0.133713767219023 -0.484240407026470 -0.149107526058036 -0.137351370806401 -0.303318011909006 -0.140290821499797 -0.316737813746395 0.127399740161529 0.349434597411111 -0.365316250742831 0.0266675315785445 -0.330096114208013 -0.223863490899758 -0.0617249850591268 -0.748467526960242 -0.0136461195677282 0 0.096735985982319 1.69946841380435 1.21027725028725 -0.109130881370047 -0.408192044850108 0.404481170072626 0.573730780506865 -0.741392589941715 0.0408822856716448 0.253488689860871 0.940474454350736
Rv0366c -0.388065991958194 0.623473550940787 0.00394670943004493 -0.56007538995949 0.228997363133302 -0.636796599912854 -0.149748064743026 -0.173962476205796 0.264903194423235 -0.160578696470954 -0.170633125934946 0.377173682732474 -1.27081310160873 -0.391256672048043 0.402421428967012 0.0377469659079434 -0.155041134953582 0.648696091861128 -0.634892611003017 -0.455628676466238 0.285392604693003 0.766073692833485 0.171885870762573 -0.185809831480791 -0.602246814767641 -0.680827524312043 -0.537667008035772 0.499762552878253 0.106547047536766 0.0765632810622088 0.217070346008690 -0.305385278998883 -0.476165816153017 0.955556452672364 -0.0577329793427768 -0.618733632946933 -0.376124959300943
Rv1390 0.150725112802559 -0.775800559430849 -0.0126788778035556 -0.0427001783618201 -0.069384617305397 -0.523207749277153 -0.499751842344917 0.78439728155217 0.0151007317777421 -0.213464825542196 0.0857931672676646 -0.291077738310534 -0.106345884734414 0.206285331752238 0.810001861728002 0.653460326627073 -0.621897504525787 0.223450201875318 0.653596969882129 -0.231542365919594 0.320564076572742 2.09672785095627 -0.269684127112631 -0.154239583919585 -0.467103861125709 -0.870544934192351 -0.733567333957755 1.45679585945542 0.385428268618503 0.0130200929645875 0.351683747314875 0.00213334886206442 -0.263731914619857 -0.169595070317858 0.0877365736452077 -0.43864993326043 0.229783122825016
Rv1433 -0.276926234941341 -0.186666646881512 -0.821478709139138 -0.0703949835702575 -0.271456677547005 -0.118508373345262 -0.793961068276845 0.297267851428563 0.403945298456213 -0.181890701268148 0.606571683547234 -0.222134929153022 -0.523580936242423 -0.506392943535419 0.0916009613294267 -0.47270330347107 0.203833595097241 -1.67842674647551 -0.406745075402664 0.872309080465325 0.0322044763567871 1.80564869523150 -0.363897588157395 0.978915758126222 0.353881392718786 0.356225840512313 0.137136353814326 0 -0.166103442349843 -1.02085129553793 0.933347866781339 0.0982640914677162 0.250626453895732 -1.20028910514731 -0.662913249215607 0.0199066426579161 0.80296972495189
Rv1479 -0.752059326796074 0.423835477171795 0.241271855521099 0.455281335203600 -0.571485818760499 -0.217409788465438 -0.340807067656406 0.470108871468671 0.974445808134844 0.249723943390135 0.562108117500395 1.5503249565073 -0.675993989733805 -0.148658410868344 0.181700206733199 -0.0798818481620272 -1.06770857738062 -0.165243455293839 -0.746281407539939 1.63091273115541 -1.52762314874844 1.11067913145380 0.631713689720659 0.373214751370302 -0.776011018650838 -0.622582997332886 -0.330064480571788 0.54445280134614 0.319809051420315 -0.581047172540428 0.979696279246404 0.264549785077021 0.113385926943704 -0.473437950322335 -0.262397587294688 0.577656119831769 0.672243803728512
Rv1557 -0.196977246927699 0.985006792749733 0.261873075239373 0.294394537852926 -0.791963181403245 -0.504752782171741 -0.399783409804347 0.513076625660034 -0.321330521428514 -0.0360402651256899 -0.75597509234816 -0.515626340187385 0.0452171267516696 0.056630031744582 -0.0322002854940908 0.236025721958684 0.0655708618668778 0.754395298785371 -0.949960970644783 -0.438034539226566 -0.483054905643126 0.230383196946409 -0.204287381452882 -0.0355788263240135 -0.375955613131836 -0.142592293352631 -0.283506984862953 1.15487407302165 0.432258979688561 -1.16388312864380 -0.372830870612899 0.197553931737768 0.0969013542218027 -1.02849287783591 0.238710880825682 0.405599528258809 0.283279576813813
Rv1576c -0.0499316913184684 0.501114194421378 0.0139395882039203 0.119990511839776 -0.405190736055687 -0.95457350875454 -0.25384669464899 0.742572983889599 0.689777406281308 -0.578722567848402 -0.522712567830234 -0.0720177393313699 0.136602159600433 -0.237698329762817 -0.250773790372137 -0.280273569543353 0.08481592637074 -0.77181394274894 0.0622066444980982 0.238211362334782 0.0318668231705997 0.845880873656297 -0.436410472133723 -0.141641824164229 -0.0318669136896617 0.100013707432653 0.134526555404199 1.55452290610154 0.590399904707932 0.0271051100171722 -0.476335980041961 -0.123416577289481 -0.575406352543143 0.219722562895803 0.0260700919064844 -0.149112330772800 -0.1450153643494
Rv1577c -0.0278450183982884 0.0509612830220064 -0.175044595361212 0.204976484438013 -0.386854789600422 0.0740194650143751 -0.436586887234439 1.03195773786643 0.0194586143896437 0.368980683725939 -0.00791888202968411 -0.266863105938098 0.532496496686693 -0.18830586257012 -0.303269851135343 -0.374633286807097 -0.164879508944629 -1.12178512655273 0.0291107917694724 1.50656126559089 0.572962932814816 1.06365816119437 -0.270644033883625 -0.541172164674372 0.208858221049005 -0.123609678526306 -0.460977489443476 1.43664357413307 0.248292124279093 0.0291182778102208 -0.472916857092136 0.168389086756480 0.00205470790341261 0.785084453715826 -0.0838596345410896 0.393234147086641 -0.0459199780340996
Rv1583c 0.475655670824733 1.69713909833420 -0.202102862612220 0.346161053712275 -1.04264222986491 -0.65166187427217 -0.501833906991371 0.885810236350867 0.364678410792977 -0.300005461378051 -0.210735259751301 -0.346278874136999 0.870395107180103 -0.372355852809064 0.554408378989224 -0.391784489836418 -0.412172835683672 -0.464505382482269 -0.523147502044014 0.778108743466561 -0.932140798954142 0.632890202611047 0.235933887438328 -0.20506577649596 -0.325212501795945 -0.0114564669750385 -0.171475849425810 0.431342794715026 0 -0.510864501255451 -0.296051467322064 0.152947763710619 0.0204029714349528 0.308836777761183 -1.37342493109657 0.149145688712941 0.413364240347157
Rv1655 0.0223251075927752 0.796903010967716 0.652672924657407 -0.329136967313917 -0.13556615600461 0.00125342604485939 0.623978970714765 0.704812862896061 0.385275786393139 -0.217813935942751 -0.255711273723765 -0.126775704089792 -0.893321753127007 -1.57787711990060 -0.257015594419497 -0.776028430071263 -1.10433150896414 -0.676103879310937 0.0736720715749601 0.912384684136525 -0.44403132973064 -0.982589560566417 -0.197496244353358 0.532332878006874 -0.625428422093376 -0.369332435164143 -1.03371529188247 1.08624483124712 0.392189299148046 1.18776640864934 0.807548534768423 -0.315361327603549 0.227195368580946 0.389044827064781 -0.428382069834061 0.0985503108481125 0.317237089743266
Rv2153c 0 0.392446957000067 -0.454083913968921 0.172306462420641 -0.556980820255888 0.965051760472965 -0.584104255986523 1.07412130550772 -0.436615593449918 0.358468436986867 -0.172607150661248 -0.590435165589765 0.482075683392908 -0.636317770995943 0.0701599072406103 -0.163378834038519 0.318979824627463 0.0589254569541966 0.213188460131819 0.635563699638128 -0.647391786876745 0.32018330631178 0.699033904772117 -0.439676029376219 0.131382568226601 -0.0230994435193797 0.630081571366147 1.32597163799194 0.713176635111145 -0.763207712247544 -0.219466034831401 0.624662118202156 0.568604421850797 -0.913235778330163 -0.253778685137758 0.624764068907047 0.567839106816826
Rv2471 -0.39199363656392 1.12746987289314 0.220809511901860 -0.176610286317952 -0.353655969919955 -0.812965819007606 -0.322384001845247 0.326699666422604 0.485483631549057 -0.574958728588386 -0.0659866774677302 -0.157738651764013 -0.201861507203291 0.0579791598506503 -0.251443154106291 0.510583794780157 -0.0753529362943139 0.259575584895884 -0.818522091204844 0.482475641784629 0.0792277551663732 1.18532548693118 -0.270635546070125 -0.172055555618841 -0.943199788229687 -0.75874327788131 -1.13396968764222 1.56910637228032 1.05986481464067 -0.375967143998153 0.194801448555727 -0.316775956801616 -0.417310563120839 -0.0746286617540109 -0.297270526997725 -0.176357055001567 0.668491960637808
Rv2499c -0.537243909056498 0.397622696385095 -0.167347827358810 0.372180138967013 -0.0968015157180762 -0.278635921802534 0 0.543701088255677 0.0362687966085298 -0.00624035112201472 -0.316995471336409 0.00728049074109062 0.277546858133668 -0.161404661853034 -0.0310106050829292 -0.131409124928763 0.0874701171851035 0.656655343091108 -0.000547081903855088 0.069997747016101 0.81896176493848 1.07027414936235 -0.26523939522627 0.391025144348528 0.165046556762394 0.095964181901269 -0.0126834525996153 0.489742036090097 0.190120838269015 -0.0692530321030955 -0.107105635483675 -0.249146686702865 -0.219011914554181 0.171699795432103 -0.24484851529561 -0.0368028466299624 -0.24488346104546
Rv2537c -1.54852517380377 -0.874341074042938 0.181423641139317 0.642801221299337 0.103874884287271 0.44601680649898 -0.377469158323591 -0.0646186248489604 1.03153694789164 -0.479617400333405 0.96503542244367 -0.531075943335874 0.859313700170792 0.302701882579311 0.00355723926114276 -0.203468997938235 0.381287376619450 -0.677303841491602 -0.481707444337942 0.434766126963566 0.0577329755303098 1.5179581683803 -0.608637719941551 -0.470816347133931 -0.548918636199182 -0.80984638627858 -1.20627670924821 1.79468757639472 0.56175049471412 -0.379492403686559 0.526123121009431 0.142652916613646 0 -0.346724946416765 0.224899354013949 0.517469104495586 0.814045001489277
Rv2594c -0.0915592315033095 -0.314090467860711 0.0377971857926853 -0.413608725926847 -0.138805848292875 -0.485485251327462 -0.0281889637038224 -0.469105783759182 0.0345115784215996 0.397799570870468 0.859480658587385 -0.155392230023322 -0.789987085899737 -1.43717088075525 2.48372243063384 -1.05179137500864 -1.67199775855136 -1.17710989047698 -0.239891892769468 -0.203861627961727 -1.23303606733306 2.19726420804565 1.40138298260680 0.280280131206045 -0.218259447235721 -0.548807085320718 -1.0302963021526 1.42559679576331 0.924440813587964 0.633999439620718 0.285485761698503 0.345192680201223 0.31177849223274 0.517801596411143 -0.385743958113022 0.126997242105372 0.569102058273485
Rv2596 0.621655726251644 -1.50556625595786 -0.220777540256183 0.0550422653359987 -0.468535157027497 -0.553867887093509 -0.484168010985604 0.82454951522049 0.754941168340573 -0.260247961624755 0.0278294712207043 0.261858533712252 0.57993242792064 -0.326472637609038 -0.105475470708419 -0.245965445381945 0.54597051784572 -1.11213327363752 -0.193377793154719 0.176866753710453 0.962417657984338 0.722874774535462 0.0799706883242828 -0.661014295107486 -0.870413249409203 -0.834019003248973 -0.68846267075273 0.937596594816036 0 -0.148396765628845 -0.375216723864875 -0.0962527687525486 -0.472452528748192 -0.189658553068374 -0.225347354541787 -0.217379349029375 -0.492859918772099
Rv2651c -0.229204055930774 -0.617050392509674 -0.128822525528062 0.560395367630405 -0.296304210846734 0.0408947369376493 -0.0333322856649438 0.77271700076157 0.517103115607297 -0.498888290887393 0.221129603059931 -0.295243311530779 -0.192404834142698 -0.471288820368275 -0.298563940516146 -0.752766356824236 -0.382633448507600 0.0308294667744248 0.337707383376796 -1.09466872856431 0.443776940581408 1.41871586311672 0.288620133553055 -0.57136650873724 0.0756419127710647 -0.351508858640756 -0.105303805060215 1.12776620479186 0.243007443766294 0.0842268605739605 0 -0.232411840900906 0.0088133693888804 -0.0395616160830809 0.116191627761914 -0.084095630416669 -0.06699267596207
Rv2749 0.67147323687974 0.515021006021528 -0.331581432105238 -0.113757426597101 -0.404567512609385 -0.66654550615044 -0.893617399436227 0.152583408062541 0.00634561013456642 -0.0932315887840204 0.100330408119875 -0.0396429114086066 -0.194693990450112 0.458210871733306 0.301776428151117 0.384581382763185 -0.72078783837246 -0.343660726238179 0.945085561320243 0.570985449933133 0.177194596579397 2.53026583808176 0.854720389605427 0.323447119943077 -0.608055095555125 -0.812001217221611 -1.10431569369476 1.38238456071087 0.255890881502460 0.265116912054020 0.102759727556095 -0.131913397660482 -0.459650689247888 -0.252070033008784 0 -0.150546866941273 -0.35212942019957
Rv2751 -0.363360898365959 -0.0513630693837782 0.252723966128414 0.729537288739589 0.221862326913705 -0.617595551010856 -0.136402976604705 -1.38078053347620 1.18100540630261 -0.613222999946081 -0.393532732341757 -0.383616980715502 0.615838450355023 -0.284064102519055 0.343275209211059 0.311652095104565 0.133458699084042 0.708501450888262 -0.857830220883975 0.039322777429851 0.221173258083513 4.41439460459178 -0.127321446447218 -0.092613430211406 -0.7792401441114 -0.0179586037987004 -0.279761353574648 0.785697965478024 0.830948909668666 -0.664975294917191 -0.283247744558386 -0.0590123423205544 -0.814164334598993 0.525682570384523 0.276136104184922 -0.432923901522002 1.12140133895826
Rv2752c -1.29892239238214 -0.780734988789203 0.0834275625514021 1.54939748152723 -0.389294422711025 0.249929136876295 -0.320370217246624 0.0470719938578451 0.550632958991705 0.384007473440113 -0.0530919240340727 -0.214840314002862 1.80266482430936 -1.11846438362379 -0.447061737985001 0.480626426844643 -0.666873288217157 0.885319222417094 0.211035047744637 1.20522559696662 0.0684417219307367 1.46605720756724 -0.162022071176748 -0.293447816818951 -0.366097494082554 0.267087926985553 0.135430834835700 0.848454898325203 0.360734047964701 -0.622180068388708 -0.517981845574787 0.136552434842573 0.366017374950483 -0.325845816096365 -0.224974956562215 0.638707761933644 0
Rv3245c -0.834472141416432 0.786164882469062 0.0577851090072661 0.372220614945125 -0.0667422131209805 -0.0177978943285895 -0.0706206979578385 -0.656200632070704 0.042105226613101 -0.0826161743710897 0 -0.494179362123084 0.238558427146740 -0.543679261673062 -0.252938306263147 -0.976692816128156 -0.464545559917535 -0.555328025998626 0.481735674411195 -0.266654557913684 0.653850634538305 2.74411210670891 0.13742307546763 -0.468281845006573 -0.122440090554279 -0.588054672153951 -0.00890741504225689 1.66045210416959 0.277170427691137 0.375729528550611 -0.214251074510829 -0.441421901183076 -0.0464610523844626 0.254065191495367 -0.284844501593917 -0.0254360423588478 0.28602581890421
Rv3370c -0.0551968598685849 -0.570402221327758 -0.0618506109542939 -0.215160934990921 -0.171640357564654 0.0197129936122572 0.000314636606224659 0.691499303287016 0.351538661265492 0.367827378433038 -0.138825246159555 0.0193704717339363 -0.430649660725215 -0.774005231591661 1.07009656849868 -0.688826105820677 -0.575413029085178 -0.515361311668442 -0.149466657005184 0.257445570762756 -0.13589699172234 2.34692260840961 1.29246316974454 0.0165417509490214 -0.431473616529881 -0.463858070158790 -0.394479372400275 0.66397765463937 1.08029165263607 0.0102816566616260 -0.0592984120217441 -0.260924291665678 0 -0.151705477296636 0.09461841356077 -0.373732418875442 -0.299874774884297
Rv3419c -0.0805771136798346 0.342738673083714 -0.238145685115930 -0.148890755716250 0.230298216689495 -0.615683168888663 0.422394681067214 1.10887045528261 0.145176674934591 -0.241030978839864 -0.0259554962075292 -0.192885284618353 -0.412204041675247 -0.0640445634540042 -0.137278365355269 0.036434129197094 0.167616126513673 -0.295469362683807 -0.0112283831261816 0.229669237807172 0.0246250454994644 1.36403360061037 0.252231539077255 -0.536577307893738 -0.327366896526933 -0.806955122493614 -0.517540447588462 2.11089455474252 1.19382252164629 0.164235798732910 -0.635330625458266 0.333182758972795 0.406393930134206 -0.369426725292642 0.0632766289676079 0.16935686964012 0.386030231883208
Rv3421c -0.462702581534693 0.693865664832563 0.385360661941941 0.155887489202936 -0.191405738478492 -0.305715893968036 0 0.0313818294823475 0.613766929202128 0.0257673957766171 -0.278632734440603 -0.129455416865710 -0.322062924389028 -1.19715638949191 0.0894343818427944 -1.11578786258869 -0.741277056075114 0.520516394273596 -0.136217505393414 0.335615458791024 -1.05322627969751 1.51770481686585 -0.00330792959093169 0.896597496563425 -0.673761798773456 -0.537828260856584 -0.850559329529963 1.89823914978319 1.46574546798187 0.160478204423858 0.921054436883506 -0.543247796335086 0.528791311266918 0.156315886138962 -0.232018530681334 -0.00186090661506060 0.501607023479998
Rv3422c -1.67019873338477 -0.525698506189816 -0.0987530347000084 0.319019938576565 0.175179341410141 -0.365937495794994 -0.0520237736314878 0.95526529748282 0.50883353780497 0 0.173682578142651 -0.274904552367248 0.126900591978449 0.0393954177456008 -0.173471737883719 0.160930036567269 -1.14878398021443 0.514786326095419 0.146621572226894 0.0851064882013551 0.00206805027600747 1.4456798183815 -0.107232103267883 -0.481501027881787 0.0206270665849476 -0.324475195562396 -0.258468024958028 1.79487726915381 0.831269210673773 0.642517916733266 -0.480954171944337 -0.138631323951361 -0.0602019422832378 -0.0501587417404996 0.0855342631903778 -0.0880219162447928 0.076350684856272
Rv3871 -0.897725183967201 0.268189321832856 0.175013810213934 0.357755552049174 -0.159722578697579 -1.24371050963548 0.149284770429248 0.399116955704333 0.472061114468002 -0.702869701223249 0.0052996064804755 -0.149166306709193 0.64761683882802 0.222049364981448 -0.163217516866950 -0.0156095935147202 0.290305900670162 0.595441293157494 -0.40006246772455 0.556566226149954 0.204997534815252 1.98095255652967 -0.738747485695194 0.0917539293079873 -0.57739744722969 -0.246292007893245 -0.653245892090093 1.06878571563138 0.699774562923672 -0.547864155561518 0 -0.329405263081286 -0.175218023352071 -0.392010884066851 -0.552889809857651 -0.0225071426761975 0.428541899883834
[+] Show/hide bicluster #154 motif PSSM #1. bicluster 154 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 1 0 0 0
2 0 0 1 0
3 0 0.8 0 0.2
4 0.6 0 0.4 0
5 0 0 0.4 0.6
6 1 0 0 0
7 0 0.4 0 0.6
8 0 0.6 0.4 0
9 0 0.4 0.6 0
10 1 0 0 0
11 1 0 0 0
12 0 0.6 0.4 0
13 0.6 0 0.4 0
14 1 0 0 0
15 0.4 0 0 0.6
16 0 0.4 0 0.6
17 0 0 1 0
18 0 0.4 0 0.6
19 0 0 0.4 0.6
20 0 1 0 0
21 0 0 1 0
22 0.2 0 0.8 0
23 0.8 0 0 0.2
24 1 0 0 0 [+] Show/hide bicluster #154 motif PSSM #2. bicluster 154 motif PSSM #2 Mycobacterium tuberculosis H37Rv 20x4
POSITION A C G T
1 1 0 0 0
2 0.5 0 0.5 0
3 0 0 0 1
4 0 0 0 1
5 0 0 0 1
6 0.5 0 0.5 0
7 0 0.5 0.5 0
8 0 1 0 0
9 1 0 0 0
10 0 0 0 1
11 0 1 0 0
12 0 0 0.5 0.5
13 0 1 0 0
14 0.5 0 0.5 0
15 0 0.5 0.5 0
16 0 0.5 0.5 0
17 0.5 0 0 0.5
18 0 0 0 1
19 0 1 0 0
20 0 1 0 0 |