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[+] Show/hide bicluster #153 rows and columns.
bicluster 153
Mycobacterium tuberculosis H37Rv
14x35
[+] Show/hide bicluster #153 rows (genes).
bicluster 153 genes
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #153 rows (short gene names).
bicluster 153 short names
Mycobacterium tuberculosis H37Rv
14
short_name
[+] Show/hide bicluster #153 rows (long gene names).
bicluster 153 long names
Mycobacterium tuberculosis H37Rv
14
long_name
[+] Show/hide bicluster #153 rows (NCBI RefSeq gene IDs).
bicluster 153 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
26
[+] Show/hide bicluster #153 gene upstream sequences.
bicluster 153 upstream sequences
Mycobacterium tuberculosis H37Rv
14
upstream
[+] Show/hide bicluster #153 columns (arrays; conditions).
bicluster 153 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #153 ratios.
bicluster 153 ratios
Mycobacterium tuberculosis H37Rv
14x35
GENES Amikacin Amp Antimycin BZA CCCP Cephalexin Cerulenin Deferoxamine DIPED DNP DTNB DTT EMB Eta GSNO GSNO_KCN GSNO_menadione INH Levo mercaptoethanol methoxatin Mtm NRP_1 Oflox PA_1 pH4_8 SM Succinate TRC TRZ UV Valinomycin X_109 X_121940 X_59
Rv0274 0 -0.477850018975543 -0.486655747465618 1.03497212490793 1.61974226753632 -0.293944566429489 -0.216629222070534 -0.266952234758772 -0.568392468577838 3.73650466466598 -0.151532271053503 1.46460199029895 -0.364243388959414 -0.397248749658541 -0.215619160141601 2.57016563404603 -0.406271686047645 -0.394040865556967 -0.0980555218957183 0.159810105383640 -0.368869890165092 -0.211861829924433 0.163129206756152 -0.256721875993343 0.162456179789599 0.103632841125231 -0.928443293747975 -0.067785155332007 0.763603386639676 2.12415395940444 -0.406483053165211 1.69765038495147 -0.479187894090701 -0.125332215906904 -0.523800206339089
Rv1063c -0.403027506481995 -0.268204922518092 0.195035633238586 1.26394971010524 2.37505065604954 -0.0329308495794886 0.00112328885006267 0.0321061601465782 -0.342879412543652 3.21646537641662 -0.107381425624716 1.10999525322971 -0.489328314165966 0.133970288226093 -0.472615299238923 2.38259553229510 -0.194274701962022 -0.0209723058643534 -0.00115894598954633 -0.194913675835487 -0.186479035447026 -0.0958776886376078 0.99614010261907 -0.210580796212932 0.428518164769807 0.0116515284555011 -0.359030435829031 -0.0419517328261913 1.77266111559046 1.77559984238699 -0.339352140354773 -0.241296783605609 -0.186261355296551 -0.682614955817246 -0.242165543724837
Rv1463 -0.511733840515909 -0.323264374739457 -0.247771676950181 0.732302809750793 2.28559954591753 -0.0602186341130515 -0.0375388192166886 0.265490108574713 -0.115240272860879 1.94154385089214 -0.198477355056397 0.962265852422171 0.0526917301116145 -0.166526336869095 -0.0876187991698833 1.8627201585345 0.607146684294576 -0.35768906086914 -0.518129924914791 0.402778594843374 -0.418987703540527 -0.506325377992512 0.0257119801747411 -0.443661322970341 0.140775133162554 -0.384641093713594 0 -0.915681232737182 1.73502913818355 1.41300265976870 -0.632244854558038 -0.201087337427086 -0.0182588476954165 0.841138051506315 0.248329377397525
Rv1995 -0.0898289891574826 -0.555395332094536 -0.415957907401876 0.174319735045228 2.574281747336 -0.383230564854338 0.138238582466475 -0.161357138951071 0.077851215671307 2.52263621413478 -0.609390985581231 0.746838239378827 -0.322262545686522 0.234402685705772 0.130182254513205 1.53451194013652 -0.501301011250768 -0.415569254422505 -0.180317601089607 -0.33517535164795 -0.586835928631349 -0.352188883043142 1.46109048285424 -0.140306246710563 -0.424572309918106 -0.123304537205650 -0.153540888410594 -0.512797067580716 0.283439909543652 1.63689747139097 -0.253289613347102 0.758731873324264 -0.111239548716112 1.50147849995364 -0.270393470193992
Rv2340c -0.269678008459139 -0.459044324881739 0.0568807833740098 0.661864501211308 1.93662606920377 -0.337442129037709 -0.655509537617301 -0.415736512065769 0.368150884761844 2.13176377134834 -0.827393917243393 1.18493092243125 -0.164608408032857 -0.975800988198979 -0.76610214156698 1.80705693089364 -0.855537250848732 -1.01292252832206 -0.435400571269783 -0.484149949709862 -0.484481324260343 0.232694460236189 1.09160566487741 -0.173459588962766 -0.677475070354057 0.538353655013132 -0.957428613537692 -0.523153826100191 1.19495778730864 0.364040600225568 -0.178169304256488 1.21457764183821 0 -0.0360610283430852 -0.222918981758541
Rv2495c -1.57020485401301 -0.407789891031386 -0.522430524745463 0.435069971811487 1.84187592407810 0 -0.640411134227669 -0.365649843345943 -0.168889542100470 2.43904907950334 -0.0401428036204057 1.07189691362861 -0.0879221104139712 -0.517705319602762 -0.441679278369934 2.13382539178129 -0.151087016848462 -0.800419015999806 -0.9617504163036 0.331457785991873 -0.332165196123340 -0.182585707210153 0.406744003132187 -0.372511893752306 0.255456928602046 -0.0571480575397304 -0.858220344766824 -0.426447273212242 1.35027771839246 0.77631549322898 -0.200997978521242 0.307724363472148 0.0304360501965792 -0.662718654779681 0.201689546891318
Rv2497c 0.0617291232419624 -0.050593735867594 -0.554261931587222 1.13197611919290 2.21821093028099 -0.288847688146300 -0.190741356989666 -0.420672605518973 -0.027168919026096 1.77987132214924 -0.634957777940987 0.774142423290851 0.0706039102251253 0.106458355108983 -1.03802565797353 1.97945605635833 0.459161019707685 -0.0204478172761868 -0.617160607487298 -0.507681892320334 -0.940821394630601 -0.514534534238618 1.10374935475413 -0.465580429534209 -0.0433293725377127 0.237082300580955 -0.352314643482624 -1.15049836197244 1.58524999518298 0.903964852636177 -0.570727387248808 1.30856187830548 0.199983297917634 -0.261435331076102 0
Rv2498c -0.223638052098326 -0.214860530231736 -0.188688645217323 0.386044760354637 2.11113248615733 -0.160596184448843 -0.0700138588866125 -0.106594259645152 0.0852963527119483 2.91170804444830 -0.280666583552138 1.40748839938904 -0.061024134762699 -0.0743847977075187 -0.406808412857059 3.01491270823737 -0.0319139587141594 0 -0.236554742853393 0.00565987462921079 -0.462122424012898 0.0741331429023958 0.962535478618955 -0.288630100284609 -0.0684003655319123 0.256315252620870 -0.219269711369651 -0.944876800090346 1.08738188176496 1.99855126749180 -0.0257786576065362 0.671194513089704 0.000386396435854665 0.94433287357316 0.00814138357105712
Rv2499c -0.537243909056498 -0.0867001797672685 -0.0756493862911962 0.426753481107894 1.93864815014581 -0.203097275920656 -0.177823929350903 -0.0968015157180762 -0.278635921802534 2.94756898000829 -0.0422607121762284 0.543701088255677 -0.00624035112201472 -0.316995471336409 0.00728049074109062 3.60421974588014 -0.161404661853034 -0.32781312871872 -0.0310106050829292 0.0874701171851035 0.0377478177538031 -0.467826199349383 0.917225096122557 -0.26523939522627 -0.517470601927154 0.165046556762394 -0.435042874910097 -0.107105635483675 0.806459041757567 1.53646876601862 -0.246571741795690 0.0639603412690394 -0.219011914554181 0.171699795432103 -0.24488346104546
Rv2500c -0.94997450267 0.0567437116844773 -0.627753686000222 1.14372950606403 1.95128554759098 -0.405922020863091 -0.716988266982311 -0.583583764636755 0.087256696190812 2.09695171547976 -0.503189758279826 1.44127179095233 -0.0589025100731424 -0.201831496133623 -0.398192951292328 2.62046903694539 -0.301789401741252 0.0312579038366981 -0.721919689820058 0.180819849097909 -1.27278133642888 0.0862979641393247 0 -0.437684156146445 -0.314111537453053 1.32011313098744 -0.768410789119231 -0.902439272563526 1.63851653652390 2.02450144416 -0.410868284627152 0.330406218668582 -0.363454545457581 0.240097276532373 -0.401538487925162
Rv2501c -0.276376270251030 -0.557349314780724 0.0511441383784855 0.400064699724059 2.02765868582613 -0.161873249781993 -0.251453476032935 -0.232125303199939 -0.242134323396706 3.09399679030781 0 1.26486164185862 -0.210635696227882 -0.688865415771358 -0.28158171425122 2.49936212747649 -0.445331338510051 -0.95239675019962 -0.276738182372153 -0.234090298305395 0.0380913449694848 -0.211616610765062 -0.217654158050046 -0.320880490573828 0.212492593429450 0.109514514360812 -0.65266542232953 -0.0101042212228349 1.22658410192845 2.02427834627109 -0.0542547644164943 0.725946241719114 -0.46407829386715 -0.238437627119667 -0.0506823165999982
Rv2503c -0.139959538103814 0.191323120019169 0.248791899575361 0 2.01150182967962 -0.279729949609951 -0.48794598698967 -0.552643570781526 0.275246043214266 2.10201068864784 -0.27327856714027 0.757803585071086 0.319115842903367 0.098201425679702 -0.0909716397798547 3.80880660435551 -0.69483055415161 0.338162950473253 -0.215228651430416 -0.404816969882556 -0.370542313622453 -0.534253095068224 -0.174672177353593 0.129977377840763 -0.52680321342693 -0.228667435157184 0.064445837669876 0.141262086907205 0.326243582952509 1.57871175511475 0.0837492831788535 0.648790962122733 0.61183470777894 0.00296715485026904 -0.0124249667757504
Rv2504c 0.478036545487993 -0.488005072821666 0.11453544002585 0.667035570686344 2.31907753208979 -0.33335589538498 -0.348069374768952 -0.206198489755780 -0.253672470103451 3.09234954647436 -0.328863051225309 0.954048221792679 -0.473027319550625 -0.442707837967042 -0.176824611671976 3.33998739071447 -0.618086139414278 -0.358267326337566 -0.177616330215214 -0.229794231696581 -0.455061665600556 0.133430396900128 -1.18802071989192 -0.317413198124423 -0.534237636540893 0.644070334628116 -0.00677740675457622 0 1.03686304290232 1.88004351228634 0.103817118971482 1.6369232573397 -0.288249244235234 0.434824650545901 -0.223250822256032
Rv3010c -0.396754605813694 -0.065616536864094 -0.33331384740041 0.528529069048085 2.71322423865028 -0.273695552234465 -0.364823407592843 -0.629312686222274 -0.357446679957207 2.88477479957010 -0.527513683362023 1.12764738471143 0.0179860501729413 -0.432993662155486 -1.22809713942121 1.87307382828442 0.0417706717154847 -0.241125226898964 0 -0.322689368870901 -0.912047609538628 -0.317780669561632 1.86262066270767 0.0152943339954176 -0.364194549948839 0.196088961607704 0.166419256330272 -0.609422548197206 1.35569004167853 1.95466897484688 0.00570934121313335 -0.382789770526661 -0.0754584637872999 -0.533128706933696 0.0900341920229213
[+] Show/hide bicluster #153 motif PSSM #1. bicluster 153 motif PSSM #1 Mycobacterium tuberculosis H37Rv 23x4
POSITION A C G T
1 0.2 0 0 0.8
2 1 0 0 0
3 0.4 0.6 0 0
4 0.4 0.2 0.2 0.2
5 0.4 0.2 0.2 0.2
6 0.4 0.2 0.2 0.2
7 0.2 0 0 0.8
8 0 1 0 0
9 0.6 0 0.2 0.2
10 0 0 0.8 0.2
11 0.4 0.4 0 0.2
12 0.8 0 0 0.2
13 0.4 0.4 0.2 0
14 0.2 0.4 0 0.4
15 0 0 0 1
16 0 0 1 0
17 0.6 0.4 0 0
18 0 0.2 0.4 0.4
19 0.2 0 0.8 0
20 0 0 0 1
21 0 0.2 0.4 0.4
22 0.8 0.2 0 0
23 0 0 0.8 0.2 [+] Show/hide bicluster #153 motif PSSM #2. bicluster 153 motif PSSM #2 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 0 1 0 0
2 1 0 0 0
3 1 0 0 0
4 0 1 0 0
5 0 0 1 0
6 0 1 0 0
7 0 0 1 0
8 0 0 1 0 |