|
[+] Show/hide bicluster #151 rows and columns.
bicluster 151
Mycobacterium tuberculosis H37Rv
23x37
[+] Show/hide bicluster #151 rows (genes).
bicluster 151 genes
Mycobacterium tuberculosis H37Rv
23
[+] Show/hide bicluster #151 rows (short gene names).
bicluster 151 short names
Mycobacterium tuberculosis H37Rv
23
short_name
[+] Show/hide bicluster #151 rows (long gene names).
bicluster 151 long names
Mycobacterium tuberculosis H37Rv
23
long_name
[+] Show/hide bicluster #151 rows (NCBI RefSeq gene IDs).
bicluster 151 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
44
[+] Show/hide bicluster #151 gene upstream sequences.
bicluster 151 upstream sequences
Mycobacterium tuberculosis H37Rv
23
upstream
[+] Show/hide bicluster #151 columns (arrays; conditions).
bicluster 151 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #151 ratios.
bicluster 151 ratios
Mycobacterium tuberculosis H37Rv
23x37
GENES Amikacin Amp Cap Cephalexin Clofazimine Clotrimazole CPZ Deferoxamine Econazole Eta GSNO GSNO_CFZ INH Levo mercaptoethanol Min_med__succinate_ Novobiocin NRP_1 Oflox PA_1 PA_21 PA824 Palmitate Procept_6776 Procept_6778 Rifp Rox SM starvation Succinate Tet TLM Valinomycin X_111891 X_124196 X5CL_PZA ZnSO4
Rv0265c -1.14792034231575 -0.0443609309824270 -0.527172213670087 -0.189624214001028 0.743675905021265 0.702298826506075 -0.713677079659424 0.0671269696389865 1.32389332624064 0.402805932630162 0.869341749253187 -1.19834530783148 0.863011676633314 -0.0143119915884763 -0.498312203808878 0.0723874926761854 0.671029015627126 0.0743772074086915 -0.249007295252676 0.00158817971758159 0.346472770171246 1.19023094068114 -0.0246498942081822 0.0513954356768129 0.192389753790718 -0.865681825112961 -0.967532745601603 0.872176653218216 -0.576342491938796 1.12288316179679 -3.94245889789596 0.44743442122879 -1.58085757063199 -0.245094225501397 -0.107513761831999 1.39216198990635 0.197675148400464
Rv0407 -0.791272567273735 -0.473913972207753 -0.872859441412833 -0.0317001890094616 0 1.56289180713032 1.12935706598650 0.655333549129743 1.97222927909171 0.532844544315969 0 0 0.330353330530081 0.0388212022277982 0 0 0 0 0.496808842507982 2.01400104022171 1.32308297247466 -0.139716705779916 0 -0.771530554104957 -0.260061378572949 0.391970309335243 -1.78300979756288 -0.117395185615484 -1.40915282356938 0 -3.43241616674967 0.470964488251822 2.43413167822789 0.499425537704625 1.00512919652100 0.113358758091174 0
Rv0408 -2.05997250931096 -0.0398917547699907 -3.58040166102057 0.507216951294394 0.957823422225526 1.05009432740552 1.36899218963745 0.457454195570549 1.60693194264890 -0.388518585977646 0.650265148432947 0.824910237192692 -0.222806180707530 -0.20317571101422 0.000617261948667741 -1.10216179804562 -0.0492817240307728 -0.58753201974097 -0.600745063410784 0.914376838947448 1.24576014559023 0.464072613861721 0.175939304158506 -0.370863217799772 0.499327722285042 0 -2.47041278240467 -0.650688606558546 -1.30752194591399 -0.0661762325479264 -1.61428508934597 -0.342416810551365 -2.93982902865749 0.565324460769669 0.553386740035482 0.435170454749953 0.427651833973921
Rv0409 -0.599941512296522 -0.00936578220749337 -1.26333986178176 -0.00691514015985815 1.09505008265799 0.498646808362479 0.776939408730832 0.0932257143192122 0.659703278161325 0 -0.0348158393982632 1.22531476306169 -0.0466806492627786 -0.172298383000483 -0.133066210308324 -1.22227495567645 -0.220326355953307 -0.823230853061952 -0.0263243527966736 0.319926961296286 0.497439504351536 -0.387781302116205 -0.390917629873833 0.0477176563200635 0.460938821091138 -0.0107108910510952 -1.26868528269960 -1.16777830867422 -0.746866653743509 -0.305862774234162 -4.65578333803063 0.0027661016093242 -2.95051873040363 0.0960210620741629 0.677076026191412 1.95699783640916 0.129737529610535
Rv1007c -0.564582984222479 -0.138813726015891 -2.05746406552910 0.194678180027075 -0.219257867462942 -0.446743891969646 0.087036137269549 -0.127844366492496 0.0699667571122843 0.655998732087651 0.345153763453474 -0.497256135006499 1.08291405587833 0.632960850572911 -0.345257008980057 -1.49699904224452 0.0441654235381881 0.360294889969178 0.714651947201155 0.263792942177511 0.0373998911185074 3.47800542226644 -0.0184157711388582 1.67504344114366 0.96943812684788 0.0655234260879466 -2.48454017144696 0 -1.68349549196595 -0.90179082708966 -2.68483297924346 0.715222674037982 -1.81666705763931 -0.095028171768054 0.227253753224678 0.93941202500738 0.139598173948417
Rv1274 -1.82562045062847 0.587399532933433 -1.69028330702293 0.652790273527291 1.19953395602071 0.511436634619162 0.595121943867175 0.489868470568122 1.28543653386867 0.220213333866066 0.273539717283414 -0.039131594324426 0 1.10253451044377 -0.805783117501852 -0.588613067711869 0.340061028723338 -1.08657782836319 0.818495440330855 -0.213895491808584 -0.0767041933772187 -0.774213459712364 0.754510872920778 -0.44398095206529 0.611448500226592 -1.45922291498328 -3.6174115645263 -0.0925982178119568 -1.63885540332490 0.567506559665222 -3.23765223754095 -0.0660411445578566 -1.62594560911414 0.353802184529114 0.396158491236158 0.00389638875657557 -0.039131594324426
Rv1466 -1.72617781998342 -0.0124173312670758 -2.80503176011155 -0.153508871518096 0.480588739216737 0.115635831634045 -0.123027010876870 0.458840057741263 -0.0606244672149188 0.361005483789909 -0.255543111764330 -0.142957352426771 0.70113413975059 0 0.0117758150964236 -0.895840277063227 0.260884806681188 -0.623301346361284 -1.03484000655719 0.488988376076784 0.337387846418078 0.500230100670088 0.230116687336859 1.12940364693029 0.541876241814087 -0.616932365581843 -2.42114478439681 -0.0398464821969681 0.767957975316157 -0.204462338905710 -2.67001582444632 0.427884364284558 -0.383634583511667 -0.205981231836858 0.0140069536520619 -0.260700905719717 0.269852276402103
Rv1708 -0.429156995416899 0.722979342364557 -2.88741157377573 0.164017108221806 -0.235308427486592 0 -0.104473226731178 -0.00941049574200594 -0.428230054502721 0.307238333362696 0.439459826125405 -0.0265035435965331 0.0506065326862762 -0.044698266019689 0.147636298456632 -0.863051206520368 -0.610327608785369 0.530915492546946 -0.313244599880297 -0.398456027341566 -0.285161509641972 0.150065079214337 -0.974505418489725 0.0796134815133771 0.0127503944967963 -0.586278604456952 -1.51463126244772 -0.190950288965551 -0.0483404982397411 0.211756860888197 -3.6107324079469 0.0771835714706119 -0.801807389079869 0.251520267534066 -0.169623725339786 1.26401921155297 0.767162107968845
Rv1925 -2.43314646386701 0.0771159888113844 -1.58826081414894 -0.18696261818254 0.461853866256431 0.208928084620530 0.927876825628531 -0.246533213479457 0.19389572549592 0.346622564272103 -0.206852522875999 0.0354319018655982 0.393450564288042 -0.490217662056709 -0.429186809633487 -1.00171130484999 0.399822235634092 0.530282214966656 -0.403185911749265 0.217286940051227 0.0707430407262218 1.93644611238758 -0.633006419692802 1.42952834915305 0.277633620167397 -1.13557130078156 -2.61671194287750 0.0398700862756301 -0.276703435266353 -0.377619658840247 -3.44400060654057 0.0846299171417474 -1.87133062536413 -0.216269561067684 0.112227095683203 0.847783970306711 -0.0509794252219544
Rv2197c -0.9946542092853 0.954975607723275 -1.11504714253183 0.40248781793958 0.354018534571709 0.406798261077820 -0.556607198676346 -0.172801936883066 -0.121208137074486 0.452570758709527 0.175867742747354 0.298704274213758 0.969481667586585 -0.465566365009938 0.102835278416837 -1.25215196982091 -1.8862641007326 -1.87321132620334 -0.390665333772345 0.225320117426934 0.229707549628343 1.23949787930581 0.431686034346539 0.0746887865050994 0.716711678388178 -0.59242548135685 -1.84296330746143 -0.108209517935404 -0.0672110441037469 0.874572948296896 -3.11064135497836 0.669441309772795 -1.92479132315604 0 0.372540736614091 -0.679662552307539 0.533155090511415
Rv2199c -2.53915366646149 0.95009448817295 -1.42821536839709 0.228946271955056 0.265344422863651 0.788445078542462 -0.502267370042361 0.529516166169564 0.829814010648424 1.34484687063945 0.181281564882164 -0.0130187069386586 1.63580098933924 -0.623278494389093 -0.241390564720111 -0.132658361879613 -0.942384912558482 -0.269525715655421 -0.574741927968591 0.527288642328964 0.522503786823340 0.181628452902457 0.600536084629393 -0.58228428718692 0.424728007174046 -0.707681118866253 -1.05160862845671 0 -0.0456075167421327 0.695566946959672 -3.77489180279747 0.710449768354681 -2.15574305210077 0.624844637906502 0.666280309092202 -0.0962849153095565 0.942806084440439
Rv2228c -2.15088023846152 0.347999433545617 -1.97812656541877 0.0878161223528487 0.613194293703503 0.9660705607513 0.0498269402177358 0.416315404047178 1.07915181086811 0.776321075165753 0.363321348448594 0.337874701743425 0.471290245625876 -0.136847526895768 0.579705894028792 0.0616062968323782 0.625953635867114 -0.432572029358347 -0.305900207806759 0.318289872907558 0.423177425644431 0.448645295321895 0.68860160044091 0.714146499699923 0.299137434411786 -0.625650504927976 -2.72531801944065 -1.20756272274145 -1.16602463005812 0.826523293683198 -2.66755836518913 -0.0376480016507959 -3.21800608854413 0.417613574145224 0.275986755286966 0.223519611472681 1.25954396497041
Rv2242 -1.73209317122706 0.0499764457486164 -1.54231040835787 0.114574582142614 0.389877905709661 0.0526405126073914 0.0164216167112426 -0.348654412444182 0.678549993813565 0.154014042686458 0.210401947577363 0.0774195433853537 0.70901877538067 -0.165533358820888 -0.274083404295778 -1.36445985997845 1.08289763936010 -1.32458690472584 -0.590591098617985 -0.568702868548323 -0.328283286404042 0.585897065361371 -0.319423905535406 -0.99881893454452 -0.436286788571346 0.276642235132292 -1.25114449797929 -1.34312207648448 -0.915943135776833 -0.352633157021656 -2.96466887691184 0.414705876535353 -2.45636018003987 -0.143941293899984 -0.505692005612702 1.63564937695188 0.0774195433853537
Rv2448c -1.87146816354822 0 -1.54250217396813 -0.104087873849731 0.103625416201914 0.621483184893616 -0.495737129156564 0.0218260558442717 0.612784302393416 0.093558614376609 0.351604837762811 -0.366671323759831 -0.369179328231078 0.899993276627759 -0.199564752476682 -1.45995553230565 0.244006497761547 0.915727915363166 0.174712234901383 0.871987887755245 0.759026124454968 0.444294999309802 -0.484435596551125 1.11172626623434 -0.0457063232773176 -0.455696782207712 -2.40957843553515 0.639770012331432 -1.72449226870751 0.260390740702891 -3.55062636507855 0.378295537817617 -0.771950746449857 0.469842798141088 0.529667778552834 1.09692107738947 0.722460555777114
Rv2457c -1.71540956486243 0.675238989660103 -1.35233853255021 0.608765282025106 0.248968071874809 0.461987148778710 0.6121204517848 0.367461670872885 0.604050098410248 1.48494892715527 0.241591177310835 0.356116438665275 1.88430213088779 -0.756575247745497 -0.301528811170942 0.0379207685808667 -0.286644100489113 -1.41194678364001 -0.69511441784711 0.241604730266723 0.351333267451193 -0.837830830138132 -0.185515114812965 -0.816310465912302 0.256219731383599 -0.564120679545296 -1.93055897692029 -0.341544369407565 0.710352170395716 0.244597794907529 -2.89571027049751 0.599440079990305 -3.0571657863602 -0.00728678578420694 0.0947802505054126 -0.616775276506621 0.694840844541172
Rv2496c -2.03745599736513 0.599603829181023 -1.41273642609683 -0.0419599896124242 -0.173352426927275 0.664993130179058 0.644648676716876 -0.0592358096183865 0.0170329123033727 0.527361543948845 -0.209922806986990 -0.229732941668071 0.463730266283643 -0.958324872240292 0.165841359364113 -0.428937771865722 0.344943063979951 0.163132650263046 -1.31988339408038 0.139492497551419 0.159075140194265 0.220824281662155 -0.0622922260189167 1.70941645730414 0.322097160395472 -1.61305287730070 -1.91938981033703 -0.452553806902709 -0.0454367237363721 -0.431533598064295 -2.9266842843439 -0.153697002654030 -0.432280088858737 -0.202388862700721 -0.0127259579880482 1.76477884864882 0.571351060795758
Rv2509 -1.36799236073266 0.0807717148616461 -1.48042586625241 0.47191479865996 -1.04726762047317 0.17225938706929 -0.871954244144455 0.025982327574944 0.3232071636323 1.12890209589643 0.430610665362857 -0.0258185274325098 1.75508157347789 -0.219124065666083 0.548522406111907 0.870873936860608 -1.36902200833789 0.0673173208729469 0.931454560601274 1.58115402783909 0.718107777257015 1.72983393482189 1.23316024227137 0.157914577849171 0.81437801199189 -1.60636512700793 -2.17261639702844 0.449849777011687 -0.278348132786848 1.35343730882589 -2.47145750391008 0.74851082023563 -1.15336442972244 0.0452640430943693 0 -1.13346040753904 0.558866868159033
Rv2674 -1.79178585595892 0.225014763298968 -0.908883064210774 0.707643020129876 -1.13399087161579 0.172391054363512 0.332179873155531 -0.0328871507720446 0.439945533399434 -0.426898982847066 0.98259035024342 -0.238755495834209 -0.461834232324542 0.0439850036310174 0.0805891169305339 -0.547764019863209 -0.439519087174736 0.47860741751717 0.0626149376679915 1.06576832234805 0.989100914773868 -0.354365748543271 0.662162346782691 0.156059139999598 -0.064164658869141 -1.68375878742703 -4.18184410206189 -0.264933088719045 -0.615988358582198 0.468332113705314 -2.74321591881380 0 -1.47034982603179 0.478528258522565 1.09627109494672 0.667913087499628 1.16735635288686
Rv2846c -1.75373785811881 0.574386777402704 -0.534630481119125 0.147356436813326 -0.156155101293832 0.239760877443022 -0.76940189686813 0.342859418054359 0 3.27377968230597 0.494381712366482 0.607217006281996 2.86499015838725 0.431186864555505 0.302997650423723 0.703095091105111 -0.0238310316053466 -0.389440916464058 -0.153287498533630 0.0600224664205751 0.438583560285879 1.92628001024456 -0.053694919747163 -0.156683010664895 -0.36738089753657 -0.172497415219188 -0.536886681416631 -0.724491572512033 -0.855088855414545 0.0968986713003386 -2.25027585007248 2.95585661480981 -0.755544146678884 0.281169337340753 -0.111063932082834 1.10606742402069 0.12050226206823
Rv2869c -2.39545503333973 0.709471263783361 -1.75594619543323 0.413507464221379 0.812027632371793 0.352659500358945 2.02579728972091 -0.323826994249355 0.240046035189204 1.11149725076752 -0.82395153175351 0.318893835345933 0.0847835479283724 -0.7232014307611 0.00821172463486856 -0.275121420810241 1.98934368672394 -0.0472015171425788 0.0222102943547320 0.0425021723541129 0.47301760070526 -0.3272086606964 -0.594795511085708 0.75508532610244 0.250404685564353 -0.448799687544577 -0.857096505052089 -0.446782414257649 -1.48970314359512 -0.335588244607914 -1.31843728933756 0.407681413925876 0.503570317773698 0.214239860324305 0.444487374837497 -2.86171244824104 0.599665334959728
Rv3042c -1.40032930276783 0.567652946943389 -2.35068693869889 -0.246388592834720 1.12648084845195 0.5920230532637 0.735050924102954 -0.176750317879885 0.611210046685078 0.817943373616736 -0.216660168005319 1.13276552853992 1.23366145117477 -0.848238068688226 -0.387276129317846 -0.516877892856919 -0.675572497182822 0.836582202330575 -0.373936329879307 0.59342003090367 -0.0132291078156698 1.21578918991368 0.107674544337249 0.0650610393384972 0.216601574774034 0.0269225368942695 -3.31284874515400 0 0.294022675208663 0.303435314839876 -2.97789072878222 0.167880484447131 -2.51394745557998 0.0670995016545194 0.627418489100931 0.150873422952965 -0.167053671348980
Rv3699 -1.50565248004374 0 -1.03776283613045 0.0479810959760747 0.992748068850924 0.378053011809103 0.85222058746691 -0.0851015233190941 0.491649387183641 0.365438315342259 0.354395356019446 0.855186706087592 0.0281645388610275 -0.413258862893623 0.412561008479875 -2.62663703489779 -1.17399689499237 -0.884082428660925 0.110025142031693 0.599681251966239 0.735429518022734 0.242597496443780 -0.05096524239193 -0.234591061669667 -0.438078694740888 -1.32741372884356 -1.75275452173141 -0.170745846287093 -1.01174642507554 -0.382941782286134 -2.48600230098351 0.241345522930282 -2.17259474689512 0.114414035231598 0.477241600508517 0.613007624430306 0.402638309798708
Rv3708c -1.28773629286141 0.703856294725964 -1.91037247643524 -0.098352220396107 -0.00904958426039206 0.218015270950097 0.334061885999449 0.0692547832247051 0.0142369280175323 0.808062070553664 -0.258937956668461 -0.282121603456781 0.759206349897762 -0.594367027483767 -0.505310175279861 -1.65871864879030 -1.51508002175775 -0.318796373721636 0.515759290575869 0.514265616947012 -0.129238299920993 1.56278206222793 -0.144938140314870 2.10255382593193 0.729745590895097 0.0921084371059977 -2.16496876913012 0.122194964475016 -1.13014894657010 0 -2.05087862079649 1.03665197777898 -2.54957771428579 -0.0110435337785423 0.244000630509368 1.38134214729138 0.236534797816992
[+] Show/hide bicluster #151 motif PSSM #1. bicluster 151 motif PSSM #1 Mycobacterium tuberculosis H37Rv 20x4
POSITION A C G T
1 0 0.75 0 0.25
2 0 0.375 0.625 0
3 0.125 0.75 0 0.125
4 0 0.875 0 0.125
5 0.125 0.25 0.625 0
6 0.125 0.75 0 0.125
7 0.125 0 0.875 0
8 0 1 0 0
9 0 0 0 1
10 0 0.375 0.25 0.375
11 0 0.125 0.875 0
12 0 0.875 0 0.125
13 0 0 1 0
14 1 0 0 0
15 0 0 0 1
16 0 1 0 0
17 0.375 0 0.625 0
18 0.125 0.875 0 0
19 0.375 0.375 0 0.25
20 0.625 0.125 0.25 0 [+] Show/hide bicluster #151 motif PSSM #2. bicluster 151 motif PSSM #2 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0.375 0.125 0 0.5
2 0 0 0.25 0.75
3 0.125 0.25 0.625 0
4 0 0.125 0.875 0
5 0 0.5 0 0.5
6 0.125 0.125 0.75 0
7 0 0 0.75 0.25
8 0.25 0.625 0 0.125
9 0 0 1 0
10 0.875 0.125 0 0
11 0 1 0 0
12 0 1 0 0
13 0.25 0.625 0.125 0
14 0.125 0 0.875 0
15 0 0.875 0 0.125
16 0 0 0.5 0.5
17 0 0 0.875 0.125
18 0 1 0 0
19 0.125 0 0.875 0
20 0 1 0 0
21 0.25 0.75 0 0
22 0.125 0.75 0.125 0
23 0 0 0.875 0.125
24 0 0.25 0.75 0 |