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[+] Show/hide bicluster #150 rows and columns.
bicluster 150
Mycobacterium tuberculosis H37Rv
21x39
[+] Show/hide bicluster #150 rows (genes).
bicluster 150 genes
Mycobacterium tuberculosis H37Rv
21
[+] Show/hide bicluster #150 rows (short gene names).
bicluster 150 short names
Mycobacterium tuberculosis H37Rv
21
short_name
[+] Show/hide bicluster #150 rows (long gene names).
bicluster 150 long names
Mycobacterium tuberculosis H37Rv
21
long_name
[+] Show/hide bicluster #150 rows (NCBI RefSeq gene IDs).
bicluster 150 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #150 gene upstream sequences.
bicluster 150 upstream sequences
Mycobacterium tuberculosis H37Rv
21
upstream
[+] Show/hide bicluster #150 columns (arrays; conditions).
bicluster 150 arrays
Mycobacterium tuberculosis H37Rv
39
[+] Show/hide bicluster #150 ratios.
bicluster 150 ratios
Mycobacterium tuberculosis H37Rv
21x39
GENES Amikacin Amp ARP4 Ascididemin_Natural_product BZA CCCP CPZ DIPED DNP Eta GSNO_CFZ INH Min_med__succinate_ Mtm Nam Nigericin Novobiocin NRP_1 Oflox PA_1 PA_21 Palmitate pH4_8 pH5_2 pH5_6 Procept_6778 PZA Rox starvation TLM TRZ UV Valinomycin Verapamil X_109 X_111891 X_111895 X_124196 X5CL_PZA
Rv0103c -0.847127508983009 0.217002755334698 -1.40743511088536 -0.100400911500182 1.89605641361455 -1.39746045886442 -0.319150061068624 1.8648649202859 -1.66847958321921 0.131237981629178 -0.949312209484906 0.430015356485954 -1.64926991412907 1.07770042697266 1.37622741597141 -0.922215837669734 -0.18398416060799 -1.36983912771976 0.395625503743593 0.196851783636097 0.0670330170844316 -1.14123261547705 0.530913863231145 0.180579120834077 0.693287652329824 -0.00566394204552369 0.806610917665336 -2.24452755026002 -1.61407667935714 0.352739801910872 -1.36790764996303 1.22112346762647 -2.32190047264283 -1.07984175628412 0.509927023227019 0.190647288795861 0.224453457068316 0.86587611620259 2.100420693746
Rv0200 -0.556860612740173 0.511325452583558 -0.142156782390014 0.272881859017397 -0.152366172690923 -2.79478317033165 -0.794599203054989 0.83400637407747 -2.44030371301811 0.501637524594978 0.308712457194478 1.0735376237282 0.0892280418778807 1.55973282691732 0.489814588088428 -0.529960333884144 -1.15984028418588 -0.344495885258523 0.457438444101616 1.15978699548182 1.44162350093517 -0.331789280576198 0.173915350389943 0.157002783357608 0.497510675097272 0.803742736608596 0.612214781074065 -0.770121524578087 -0.360791006761584 0.226440865808103 -2.54647406755480 1.10047455729733 -2.61106470821782 -1.01589993445112 1.22980530300163 0.717901994252269 -0.257234980080910 0.691935082754337 -0.16495702014112
Rv0444c -0.845463033193495 0.51788452682147 -1.79237762965109 -0.219566651381253 0.532248094197087 -2.50002125413639 -0.604041452848378 0.651237852793283 -2.12771525941403 0.325502552831881 -0.32668411502762 0.735620482666688 -0.0876255271989357 0.936618378376453 0.260377824337862 -0.114826665554151 -1.48698234962112 -0.51816426953359 -0.607916502445334 0.336709896830887 0.63273910181854 -0.296606642672683 -0.205077036112228 -0.459331098539182 0.7389409619579 0.899763722982637 0.76871150562183 -1.86780262984329 -0.565678766876579 0.362117704656956 -2.79269705790573 1.26629342681783 -3.23309485501255 -0.501681006774655 0.334258117899861 0.388897423365105 -0.494944425227412 0.56679234317299 1.66819203372411
Rv0526 -0.109695641879366 0.54425206085755 -1.57681773090738 -0.404080315540441 0.138754195433798 -1.82886876800118 -1.41211294037502 0.251589997225661 -1.75359462334852 0 -0.691724163952772 -0.268839289093129 -4.31768752214944 0.497353313858602 0.263764427498292 0.0461157079356727 -0.312118101197972 -1.33808498641853 -0.378765211470749 -0.309010237334035 -0.159508886743377 -0.479187248861947 0.771980288022686 0.745861346489845 0.559031341140927 0.754148914092931 0.284855161356923 -0.987292735979119 -1.32746854311552 0.197071480342654 -2.13463030709887 0.338799641221006 -1.28279188935529 -0.228332602179737 0.313057979587643 0.43428525348443 -0.920307292850265 0.457191102364523 0.310066932023533
Rv0527 -0.81564593555592 0.273852714302559 -1.41327279287338 -0.417708844261598 1.16466144015327 -2.06134696085672 -0.867573279779645 1.10997413450867 -1.78386775127656 -0.0115894715226151 -0.894399802701313 0.320602935883549 -2.44296522353973 1.32088016611868 1.40607207988798 -0.70910830422728 -0.178091137609972 -0.727421525564534 0.203572687439972 0.680216561210415 0.600224188475629 -0.480450220059637 0.726838617738334 0.814228940016528 0.963382344243372 1.17877111877652 1.26167090048164 -2.11302984632429 -0.762141818068596 0.0862679266248563 -1.77637897695451 0.813811436742362 -2.25202975473788 -0.565380957015644 0.695437072391383 0.732289763102399 -0.062360264323323 0.96173526052939 1.40430995682908
Rv0533c -0.215362138041856 0.614341406156157 -1.07488831398556 0.307382258151955 0.147694750537675 -3.2178828430184 -1.33609768839838 0.244718783078601 -2.83180260420228 0.903481738211628 -0.479080310712866 1.20214775029386 -0.257625563569358 1.08888690171249 0.243749282311121 -0.703026650724921 -2.00001772428334 -2.69436993421623 -0.135648041365653 0.341773251120319 0.373735396967863 -0.220450011717271 0.670317822673008 0.62876298152981 0.710451279571007 -0.0354285718813096 0.579798389410616 -0.196926289213256 -0.865568683325425 1.02016448850663 -1.53675922614892 1.16076852398388 -1.52736630000705 0.149641283483948 -0.0221116855677378 0.80091683159642 0.140897230881603 0.508342589123489 1.77389627641452
Rv0558 -0.184838941858052 -0.0831041262114829 -2.35561394212800 -0.669837340968928 1.90873608593203 -1.48396625769460 0.140351278934129 0.271133624985202 -2.18216666308199 0.436844667221029 0.177783930541227 1.02105720151840 -1.39547238502188 1.24115042862854 1.64190457067824 -1.00676345611377 -0.12261798657048 0.991315624598608 0.977563820679365 0.192301890913441 0 0.546797986632767 0.268555844304878 -0.219468518096246 -0.0859940074249732 0.797805575094158 1.37470620027181 -1.27459479433592 -1.98415680320931 -0.697193475142308 -1.17443679285445 0.902089110703956 -1.59151431509714 -0.703230620714742 -1.19383150190552 0.866764680819144 -0.832665872549711 0.839215196805845 1.88764528944829
Rv1007c -0.564582984222479 -0.138813726015891 -0.525551654125928 0.668765456820138 0.347330494316202 -0.069219941745847 0.087036137269549 1.52837197250366 -0.595182427137806 0.655998732087651 -0.497256135006499 1.08291405587833 -1.49699904224452 -0.429120759350097 0.420808491080826 -0.394089933802086 0.0441654235381881 0.360294889969178 0.714651947201155 0.263792942177511 0.0373998911185074 -0.0184157711388582 -0.969410554035763 -0.546891074038541 -0.697160670048488 0.96943812684788 0.413927374035043 -2.48454017144696 -1.68349549196595 0.715222674037982 -0.143820252690920 0.100130129812386 -1.81666705763931 -0.393834852190181 1.06580302574355 -0.095028171768054 -0.183412987152938 0.227253753224678 0.93941202500738
Rv1230c 0.0281218534888323 0.671125862346467 -0.911107874449227 -0.941061192665854 0.690156328084107 -2.32260444938999 -0.581213932025348 0.67657535934505 -1.27729186204711 -0.102522226642160 -0.666057335366754 0 0.472735169716352 0.547518152129464 0.516477787242717 0.609578680006981 -0.961370926516846 -0.347070819015141 0.186443062115438 -1.28839983259203 -0.547454916307336 1.06710246210217 1.08795241887873 0.501879792192899 0.373472821947652 0.127512851444666 1.33503127857328 -1.09325369317738 0.724858803398628 0.175051367770581 -2.08406496455044 0.274340628485190 -2.27157959951811 -0.0573357543400597 -0.0642267948202479 0.238216931298226 -0.380928357497617 -0.273568227174631 0.505313242143877
Rv1233c -0.914238148290365 0.437779103202923 -1.34060213961428 -0.686348492573383 0.541391111041997 -1.73684094227732 -1.27380859612408 0.699031952796115 -0.775241178150948 0.730006729228336 -0.558509034560069 0.642205231531887 0.183185243999041 0.483310910900043 -0.312850809279223 -0.566155412472826 -0.721084584122436 -1.06028904403510 0.715064779171607 0.632226211945275 0.270657995763065 0.197931828577286 -0.324390254085828 -0.152635714745175 -0.123536799032956 1.02189853013595 0.296939223422249 -1.53807259199847 -0.823129815756781 0.90740020992582 -2.63470302877766 0.696394086314716 -2.59691415399901 -0.843533676219931 0.131717909578305 0.477214947892171 -0.79755401902306 0.266065990658812 0.415947340260891
Rv1427c -1.03186949963486 0.42217751603769 -1.91348014942766 -0.67520930310369 0.456746959394533 -1.33459583707303 -0.60159209282367 -0.100747306210301 -1.21770813032866 0.762325765516332 0.0814243190146262 0.460968159324624 -0.834675035219207 0.0678483765047116 0.429656039552746 0 -0.666596501631448 -1.21132000969188 -0.416171601986715 0.830906290680175 0.88706915716288 -0.724603600682158 0.483021331295758 0.657069475325519 0.0468412770166001 0.110497652586854 1.52320458714163 -1.93503455068508 -0.715248266400928 0.636726339302402 -1.62965975985097 0.194232361015093 -1.86538956518264 0.100099855830650 0.497248125419294 0.338484648452504 -0.711810712036396 0.563032226723662 2.11032678888602
Rv1484 -1.49101220985983 0.141167931913748 -0.380606533250227 0.0968951211665349 0.597570472622254 -1.09514244854693 -1.04797714852475 0.117671911325143 -2.10341899719247 0.384220167881275 0.248979125787333 0.90865785731494 -0.554719385540621 0.174233031715298 0.286721435413391 -0.0391252693420181 -0.44604803597883 0.866651763883466 0.481587270759542 0.917062569413436 1.01346170148887 -0.332788196631525 -0.582208062222859 0.654952258595042 0.298750579873111 0.776546248815486 -0.061559047866117 -3.03704531541025 0.225062846432991 0.541444472006763 -1.67742238915112 0.35622270406999 -2.31836605130062 -0.522195146599168 0.356851518266347 -0.195812966333155 -0.793790067859879 -0.180052398848767 0.100956160017660
Rv1547 -0.683518306592402 0.772744794514048 -1.10587130202620 -0.0348696960979999 -0.463774092960821 -1.75056624034167 -0.319662015941134 1.10421641623846 -2.99657010793522 0.451298927542656 -0.113687115968660 0.785458482627221 -0.836190603537336 0.719386682718006 0.101469016541044 -0.0868298003082017 -1.19918432981740 -0.887946129239502 1.51922376982673 0.290532663215561 0.408960192456687 0.470384611144963 0.391394461276383 0.275690237442810 0.476943928587737 -0.240649624785188 0.0431210892589131 -0.969560837688883 -0.0537701178659104 0.403739385822640 -1.32044919106614 1.06118367320429 -3.44916583276104 0 0.59403934072355 0.421337998906208 -0.166359678083863 -0.0798825959693976 0.574378139364803
Rv1689 -0.814974573589833 0.868629910489776 -1.52056903179879 -0.528326417867943 0.75609534872253 0.828904353427541 -0.578049129649689 0.973425717484465 -1.90479394269086 0.481985056016074 -0.561328321993818 0.567652509099815 0.00246462456832408 0.784949561687902 0.447744689285885 0.747195007661822 -1.20185921952682 -1.19678492310183 0.490870385640348 -0.0255035961345613 -0.305830009360968 0.188930846190111 -0.291873371036364 -0.313468721313044 -0.0101844718064429 -0.0314504442388504 0.187252596005852 -0.96226841722138 -0.2750068941966 0.304203795480773 -2.06060076046494 0.770966382389292 -2.22473478943665 -0.0748317993454472 0.656167907171205 0.364334929503871 -0.218699669355987 0.334667283133081 0.501605311398766
Rv1708 -0.429156995416899 0.722979342364557 -0.733428705154004 -0.588129704789225 0.598243887312178 -1.42328145856848 -0.104473226731178 1.48778162412097 -2.28635714977512 0.307238333362696 -0.0265035435965331 0.0506065326862762 -0.863051206520368 0.995055952934092 1.78437447513051 -0.516888199804313 -0.610327608785369 0.530915492546946 -0.313244599880297 -0.398456027341566 -0.285161509641972 -0.974505418489725 0.978511106581997 0.341218643015948 0.951239287209708 0.0127503944967963 0.643757126983774 -1.51463126244772 -0.0483404982397411 0.0771835714706119 -1.14742990892036 0.96846741095366 -0.801807389079869 0.214739958444329 0.219261852020718 0.251520267534066 -0.49570513646401 -0.169623725339786 1.26401921155297
Rv2216 -0.78750746474025 0.385103013415141 -0.833805280951123 -0.592845519563925 1.13011122156248 -1.01793958009733 -0.372615784355744 0.639325671107006 -0.918209917095974 0.624004165179457 0.058938273509693 0.594439355363377 -1.27336549565765 1.14322685243105 1.44729936242938 -1.02576141898344 -0.209969525450256 0.304025187169872 0.803320529189731 0.29298576559062 0.0296853341141199 -0.999608434130612 0.5651212408223 0.862181454274981 0.863469025261568 1.13935470676696 1.89029905551749 -2.24239305753759 -0.218424977219968 0.476571781796721 -0.07481728848069 1.23574434362816 -2.38074350275666 -1.10488131127362 0.407066559529623 -0.101211460078456 -0.739800914773011 -0.103342453479049 2.18166801152725
Rv3417c 1.78431510509970 0.338078058826115 0.0793593121270855 -0.0825941308996807 1.06198839478293 -1.64893199903623 -1.52360592136604 0.380526225936212 -1.58656327483062 0.518423571327105 -0.472757854949116 0.86753404854982 -1.80418884349536 1.17659272870153 0.919188750458982 -0.832058799698697 -1.04457616692194 1.48793919870622 1.03891986910088 -0.0990845353210064 -0.391287070740557 -0.316206471662057 -0.483836398980546 0.160954746490867 0.00294726152703662 0.655516706157992 0.976133405667843 -2.44109447417219 -1.11599938700969 0.396131442893231 -0.971706564569219 1.0953110991995 -1.01539603905195 -1.23981760018559 0.197367153797184 0.105806652898014 -0.326520761728044 -0.13636753891511 -0.16385210352857
Rv3418c 0.226679375530508 0.644496415740338 -0.122676978742225 0.288678260766885 1.41434491570540 -1.80856939380678 -1.01099589058402 0.287948268777636 -1.47135888929483 0.103942398402610 -0.202520755642824 0.56430830541665 -2.2487569460163 0.699916338650093 1.25156250070138 -0.289650121389071 -1.05892372161274 0.481479478270252 0.508760562354837 0.421582311452828 0.266664392956821 -0.0430649263038925 -0.101755183297025 0.105814103125901 0.199496792209768 0.0623307098041643 1.28273328278542 -2.02326265340430 -1.23993722708923 -0.082066524178386 -1.18831763038083 0.846304139618902 0 -0.485431247834384 -0.649068502522727 0.379191699563694 -0.0312171416080483 -0.126482428239365 0.673569757447442
Rv3631 0.428393940960987 0.842785973637097 -1.07546383424186 0.202993935245903 -0.205979798611939 -1.99441618965763 -0.534886954103582 0.977983445125436 -1.46762265552592 0.850612794348984 -0.114087479856462 1.06283104201485 -0.725006082767559 0.78966924624726 -0.581554027503055 0.0183197065421726 0.331872173055712 -0.437517328362598 1.15824949431884 1.21168544090626 0.91500449542726 -0.221680498016245 -0.198774193127084 0.0487129451438772 0.547681328765013 0.0851113184793836 -0.0799822688979951 -0.965869904772564 -0.217596703005797 0.507621279118762 -2.01388423596444 0.625825389529948 -1.98417253158569 -0.0271028113884250 0.69276246169768 0.424196345583917 0.595912621831462 0.474992751281248 -0.212110991553747
Rv3725 -0.373030454547728 0 -0.671532731848545 -0.263852486526078 -0.0614094053353774 -2.14281483961109 -0.772680400730307 0.512823076837461 -1.55638445087558 0.579459083846577 -0.449704648032541 0.514438668143711 -0.210310304751696 0.0681406711823332 0.0268796329563303 -0.236301615906144 -2.45370958482264 -0.715386750324578 0.00169445651879239 0.634663735614061 0.730010069378593 0.757799132430522 0.431799281882376 0.553618821112304 0.858038778961404 0.0900498613654924 -0.0616329981830522 -1.45014376077761 0.191526644308194 0.206988345673375 -1.24251712271812 -0.258750362794251 -2.45245722991396 0.0830013150654828 0.631457775375767 0.496793919315038 -0.538660287770233 0.189143679089868 -0.049152383622168
Rv3795 -0.448766914806429 0.473160461265957 -0.507927070418357 0.0823888320234839 0.344528901594945 -3.42565744671520 0.0674142334890617 -0.207099254108682 -2.98188524743852 0.202579276233354 -0.237409444816563 0.380154140761587 -0.973769723531716 0.427858085604239 0.389693713567397 -0.0327659668096336 -1.93532004898078 -0.658846251184496 0.286919134777158 0.355663033198801 0.487507911767609 0.141822925975185 0.113524774930305 0.159371340305231 0.314973938684569 -0.125336834196543 0.600247027498185 -1.78707466734633 -0.69072088047783 0.373022941255939 -1.37841816680639 0.305882292864366 -1.70008363925465 -0.254026009155886 -0.00894134227976171 0.499988994046993 -0.108309541596994 0.256003321738177 0.917535979439677
[+] Show/hide bicluster #150 motif PSSM #1. bicluster 150 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0 0 0.166667 0.833333
2 0.166667 0 0.666667 0.166667
3 0.666667 0 0.333333 0
4 0.666667 0 0.166667 0.166667
5 0 0.666667 0.166667 0.166667
6 0.5 0.333333 0 0.166667
7 0 0.166667 0.333333 0.5
8 0.5 0.166667 0.166667 0.166667
9 0 1 0 0
10 0 1 0 0
11 0 0 1 0
12 1 0 0 0
13 0.166667 0 0 0.833333
14 0 0 0 1
15 0 0 0 1 [+] Show/hide bicluster #150 motif PSSM #2. bicluster 150 motif PSSM #2 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0.412336 0.554331 0.020998 0.012336
2 0.133333 0.333333 0.533333 0
3 0.066667 0.466667 0.4 0.066667
4 0.466667 0.266667 0 0.266667
5 0.066667 0.066667 0.866667 0
6 0.733333 0 0.266667 0
7 0 0.266667 0 0.733333
8 0.066667 0.733333 0.2 0
9 0.866667 0.133333 0 0
10 0.8 0.2 0 0
11 0.066667 0.933333 0 0
12 0.2 0.533333 0.2 0.066667
13 0 0 0.466667 0.533333
14 0.133333 0.8 0.066667 0
15 0.533333 0.266667 0 0.2 |