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[+] Show/hide bicluster #145 rows and columns.
bicluster 145
Mycobacterium tuberculosis H37Rv
11x37
[+] Show/hide bicluster #145 rows (genes).
bicluster 145 genes
Mycobacterium tuberculosis H37Rv
11
[+] Show/hide bicluster #145 rows (short gene names).
bicluster 145 short names
Mycobacterium tuberculosis H37Rv
11
short_name
[+] Show/hide bicluster #145 rows (long gene names).
bicluster 145 long names
Mycobacterium tuberculosis H37Rv
11
long_name
[+] Show/hide bicluster #145 rows (NCBI RefSeq gene IDs).
bicluster 145 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #145 gene upstream sequences.
bicluster 145 upstream sequences
Mycobacterium tuberculosis H37Rv
11
upstream
[+] Show/hide bicluster #145 columns (arrays; conditions).
bicluster 145 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #145 ratios.
bicluster 145 ratios
Mycobacterium tuberculosis H37Rv
11x37
GENES Amp ARP4 Ascididemin_Natural_product CCCP DCCD DIPED DNP DTT Econazole EMB Eta GSNO_CFZ GSNO_CPZ GSNO_KCN GSNO_menadione INH KCN Levo menadione mercaptoethanol Mtm NaN3 Oflox PA824 Palmitate Procept_6776 PZA SM starvation TLM UV X_111895 X_121940 X_124196 X_241 X_59 ZnSO4
Rv0682 0.235339744568893 -1.10691680794329 -0.0889208897196136 -2.38021873091000 -2.03693426221714 0.0336382935560566 -2.52624823470771 -0.0455825156214448 0.0414233510827695 0.180034263852826 -0.0588083428870143 -0.163738457557705 -1.25596266890160 -1.664745372906 -0.196848767851985 0.19283248246487 -1.81399582853878 0.650748702118613 0.487204819715848 0.161827582367448 0.831494043218197 -1.12761875504058 0.587971042381094 -1.98884259216819 -0.359073727174642 -1.24850517538931 0.0858745881722432 1.27472265344887 -0.877047318303413 -0.415071284936634 1.11027659900344 -0.0497810506238142 0.715925013002556 -0.183987244093778 -0.353739523670497 0.406012378366736 0.828144206436538
Rv0683 0.50620793834687 -1.82427202363703 -0.134999340985423 -2.68834697069476 -2.3304278777823 0.373344232196016 -3.32392081353843 -0.94149212088031 -0.370266906908086 0.256103539074749 0.586635694571778 -0.579397729578751 -1.56346749798658 -1.77745376418938 -0.505930769509319 0.995176728153534 -2.29689043803912 0.251967090935811 -0.159042604385495 0.0131946043182530 0.87046422439571 -1.51566078612097 1.13885593166681 -1.54676155878812 -0.368484143550392 -1.02702287283217 -0.0854141919573714 1.50681141392688 -1.16268099952710 0.398663213618178 0.639155691008811 -0.411430014539309 0.229751060344314 0.076087381826397 -0.451266235103533 0.102391282144868 0.429613622112953
Rv0714 0.626547037153312 -1.16230750738633 -0.302745978415407 -1.80578083467571 -2.52915377392861 0.0705777888280509 -2.12070142149908 -0.841782080323305 -0.220878331995223 0.163100831996532 0.144443561201993 -0.748930533339584 -1.61544329366246 -1.28865718671330 -0.241113720362839 0.366969152684197 -2.13501930402703 0.432607071541078 0.130246611972345 -0.0200968883551667 0.641245665836184 -1.19590599342367 0.345981363500283 -2.00067419608646 -0.161033323257524 -1.02948370154247 -0.273865607771972 1.18054279456064 -1.20989855816978 0.0810293821501817 0.631051486797177 -0.360463166811403 -0.0992446932765022 0.172623362520175 -0.163754839453701 0.197059361329997 0.216001228936500
Rv0715 0.590826391346502 -1.140474293899 -0.138186996686073 -2.10380864997925 -2.64867231241603 0.472813959046365 -2.56452878713721 -1.09430711927500 -0.20692175964925 0.248804652791687 0.268402799747988 -0.725480918233742 -1.84159450333267 -1.46103325585455 -0.153293149843713 0.704536593095596 -2.10877898906639 0.52677777302501 0.214145193395542 0.142033584838250 0.640033604524288 -0.963730624422187 0.579593016988566 -1.77585707671441 0 -1.32328543768622 -0.185282287228119 1.32824811851724 -1.1989842988779 0.24575126783209 0.679283300291708 -0.274141118172874 -0.132969096785314 0.20339861792897 -0.316915370850306 0.166245080902496 0.33995866786282
Rv0718 0.822390554156722 -1.31320187493096 -0.200438720449532 -2.70328776638320 -2.91832005546829 0.216712975219608 -2.87609358736137 -1.40144521821770 -0.349376116335861 0.124814584988037 0.282214755515011 -0.683312090828214 -1.72247186527655 -1.78624653192234 -0.325374785231052 0.753230677365966 -2.53332164386362 0.362923578389961 -0.268422570595543 0.293585346208165 0.968991042525507 -1.33473048879803 0.425845805198779 -2.36362127086571 0.052491607154051 -1.38974197101798 -0.138545658274831 1.54442252585456 -1.86031190295896 0.135713734470406 0.884195939286707 -0.341092748693214 -0.243054930104714 0.418582328530146 -0.262664384302492 0.335791275630713 0.543379180946642
Rv0723 1.03694145412968 -1.02922135741860 -0.0756763488294974 -2.32359319223482 -2.50048448397197 0.705198988513529 -2.47687565662976 -0.437359550898313 -0.228854013562302 0.257640830794735 0.61678700622798 -0.479765782199405 -1.77437062760884 -1.43903388063744 -0.474697137658354 1.34836336492403 -1.53444721884407 0.630666313945653 -0.183902686663385 0.450684788648644 0.91249818289293 -0.927713039940004 0.821337903727516 -2.10861183826161 -0.0297093330319638 -1.20644128099720 0.328786449963228 0.964776001249237 -2.24598154779976 0.597522360072883 0.565068362542574 -0.291072852259168 -0.359900647922246 0.904396703285141 -0.107250545062222 0.780190208647688 1.08957464272544
Rv1111c 0.704822885124672 -1.69764431039267 -0.331891584928967 -2.06547725629209 -3.03300016771521 0.61320467136785 -3.01388291591522 -1.03802426555879 -0.203651567586917 0.449591330611604 0.761796319675422 -1.09743051492885 -1.05773875103413 -1.34759186257358 -0.424100166511654 0.917516118004964 -2.05647360285926 0.672709251501781 -0.728133641474543 0.538110666661738 0.788596822873416 -0.671486531041078 0.656139666525642 -1.59491078685511 0.0353367922637479 -0.857670424072892 -0.447829790779224 0.501831159120046 -1.03668794966479 0.496709533867737 0.383914565476002 -0.518362751978441 -0.79718607026164 0.497598995842534 -0.082400845661286 0.665638234824085 1.03836019048422
Rv2462c 0.535776921528766 -1.49360471172566 -0.233930833191901 -3.95446559096783 -2.738537143957 0.121772307990931 -3.47766373986759 -0.911439870562316 -0.402758672885734 0.136607022254833 0.864966201712402 -1.05969944919373 -1.71269249497006 -1.12624046273025 -1.17614997270418 0.46585895603438 -1.46896141835382 0.146203876347928 -0.555791730507713 0 0.744365936007966 -0.843581215585449 0.840380071487563 -1.62786029022822 -0.275354491411416 -0.290442660798806 0.0237300281011856 1.03776530917552 -1.48798119190523 0.690853407145762 0.350098012006473 -0.79779523613721 -0.670996919969585 0.335144732813023 -0.473208096080331 0.222150958181911 1.19823612489138
Rv3442c 0.368436486683966 -1.3468246358684 -0.222340661826043 -2.86308862809095 -2.16872914235294 0.301473491593264 -2.80261765512388 -0.713996714642345 -0.223450947184083 0.126420624985037 0.148762659906950 -0.89357580113496 -2.27612740070838 -1.20150928388933 0.281874252147778 0.746935442980397 -2.35907353060426 0.512200945845496 0.438824281239986 1.01240730568286 0.803568216330465 -1.47035490938657 0.687677954308935 -2.6072008518766 -0.189390215265965 -1.37689521611235 -0.457239830027145 1.35551878695395 -1.49711955153503 0.0975513219776044 0.83208348573293 -0.321076974560573 -0.00378087971439025 0.189278850553555 -0.713968669493218 0.156824735412333 0.554274248981327
Rv3443c 0.498358055329863 -1.43878377319091 -0.083922798192226 -2.6067850598131 -2.54560824041646 0.138711621710701 -3.21246782726026 -0.116210023712645 -0.167629559820454 0.0862347193164631 0.308768344039405 -0.347360257134681 -1.57155724460407 -1.19619524812372 -0.0376208859373564 0.702528753743651 -2.23045117944698 1.02621315193298 0.227976940833400 0.133282121567694 0.570396470361749 -0.674292601404632 0.807246723129841 -2.09839083932095 -0.152917951789985 -1.29225860642058 -0.103642826270491 1.32553229551840 -1.21210020911194 0.328672326795102 0.673623721259628 -0.153268808649978 0.686311805955128 0.124737650885083 -0.713855925708241 0.262771594304405 0.58174605183211
Rv3804c 0.661564542354155 -1.75616518914747 0.313579716545664 -3.21222968921244 -2.98295443523877 0.44300611273233 -3.26734790590993 -0.374317272015067 0.0220280686147849 0.455644810982568 0.642113903343486 -0.230834032653268 -1.93020066630765 -0.297374146051766 -0.0998542488837395 0.838263649843063 -1.81995345427065 -0.0113780457995459 -0.0596383411506713 0.161865617283063 0.761513131879323 -0.341521492730215 0.455317906193792 -1.58438614641065 -0.0221233551249639 -0.669869979093134 -0.405603047011319 1.26224226901914 -1.27162664249758 0.297413655901032 0.698382432580936 -0.00468803450562427 -0.166387255836541 0.654699589142488 -0.556490697300176 0 0.628215246358561
[+] Show/hide bicluster #145 motif PSSM #1. bicluster 145 motif PSSM #1 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 0 0 1 0
2 0.8 0 0.2 0
3 0.6 0 0.4 0
4 0.2 0.4 0 0.4
5 0 0.6 0 0.4
6 0.2 0 0.8 0
7 1 0 0 0
8 0 0.2 0.8 0
9 0.2 0 0.2 0.6
10 0.2 0 0 0.8
11 0 0 0 1
12 0.2 0.2 0.6 0
13 0.8 0 0 0.2
14 0 0.2 0.8 0
15 0.2 0.2 0.6 0
16 0 0.6 0.2 0.2
17 0.4 0 0.6 0
18 1 0 0 0
19 0.2 0 0.8 0 [+] Show/hide bicluster #145 motif PSSM #2. bicluster 145 motif PSSM #2 Mycobacterium tuberculosis H37Rv 13x4
POSITION A C G T
1 0 0.4 0 0.6
2 0 0 0.4 0.6
3 0.4 0 0.6 0
4 0 0.4 0 0.6
5 0 1 0 0
6 0.2 0 0.8 0
7 1 0 0 0
8 0.2 0.8 0 0
9 0.4 0 0.2 0.4
10 1 0 0 0
11 0.2 0.4 0.4 0
12 0 1 0 0
13 0.8 0 0 0.2 |