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[+] Show/hide bicluster #138 rows and columns.
bicluster 138
Mycobacterium tuberculosis H37Rv
14x35
[+] Show/hide bicluster #138 rows (genes).
bicluster 138 genes
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #138 rows (short gene names).
bicluster 138 short names
Mycobacterium tuberculosis H37Rv
14
short_name
[+] Show/hide bicluster #138 rows (long gene names).
bicluster 138 long names
Mycobacterium tuberculosis H37Rv
14
long_name
[+] Show/hide bicluster #138 rows (NCBI RefSeq gene IDs).
bicluster 138 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
24
[+] Show/hide bicluster #138 gene upstream sequences.
bicluster 138 upstream sequences
Mycobacterium tuberculosis H37Rv
14
upstream
[+] Show/hide bicluster #138 columns (arrays; conditions).
bicluster 138 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #138 ratios.
bicluster 138 ratios
Mycobacterium tuberculosis H37Rv
14x35
GENES Amikacin Amp ARP4 CCCP Cerulenin Clofazimine DCCD Deferoxamine DIPED DNP DTNB DTT EMB Eta INH KCN mercaptoethanol methoxatin Nigericin PA824 Procept_6776 Procept_6778 SM starvation Succinate Tet TLM TRC TRZ UV Valinomycin X_111895 X_121940 X_241 X5CL_PZA
Rv0013 -0.0583008935831818 0.328860461385123 -0.401990625780717 -1.90164095839138 1.40728978874501 -1.00853894139386 -1.97041256854256 0.976412668836922 0.488918098663792 -2.00737771818022 0.960556764468443 -1.89464133562087 0.658584889835028 0.84899781487635 1.31120855466809 -0.900016056167915 0.426584567112092 1.04249143074485 2.09016430018393 -1.53088542226930 -0.55593253089021 -0.0730356200083016 1.12996223570832 -0.135745297756256 0.388189469365952 0.989540390499429 0.165623428970593 -1.26581425127400 -1.71228176517665 0.680781451513542 -0.157352966041441 -0.59336862658485 0.458387661254449 -0.654439453563294 -1.18466571179420
Rv0057 1.13083536056794 0.215665945958666 -0.113080602840370 -1.16266326835989 0.717172887629922 -1.85410748954118 -2.71405185339921 1.05826290310190 -0.052634882836385 -2.16441774235045 0.555214582450046 -0.607298309349292 -0.122275701144477 0.266060735802378 0.600868060574598 -2.58889116237157 0.470036052617721 0.699314251072702 0.141125708053232 -1.40406492188962 -1.40091074569796 -0.113095417144735 -0.0340138555374615 -0.964456705931553 1.08524101180502 0.462805227203666 -0.155920039753194 -0.196114709785519 -1.10519088774965 1.30820248388548 -1.16711594836959 -0.745039613592343 0.96900949931974 -0.775796304500662 0.896566304098683
Rv1202 1.29043517261283 1.04772992257730 -0.820272890693727 -0.76755516941409 0.126703992114488 -0.583616585901927 -3.30700712956685 -0.0917059601641046 0 -1.74446222795990 0.152061109826842 -0.793237920885166 0.48872392777272 0.428883158894617 0.617316115809844 -3.37198984226468 -0.0821484078106361 -0.210256081905520 0.0689419786241104 -1.42629855709537 -1.38941764272999 -0.673933686880406 1.46225192447387 -0.646998713043963 -0.176982697602971 1.97921466914645 0.513791384230383 -0.872258334959208 -1.79538749733652 0.965684866215988 -0.606094869249993 -0.45907622085251 0.298871639536692 -0.449468633255378 1.17014701914555
Rv1980c -0.0436939349979541 0.690792264707512 -1.58076290091360 -2.52392183282923 0.785329269799459 -1.28351145517244 -3.62402511037142 0.362249204010427 0.542496722892893 -2.5494423717932 0.493911376669588 -0.580097188273158 0.473290378744758 0.720049485644244 0.380111080089513 -2.64973685809498 0.734425960550713 0.687378196635217 0.99513525686967 -2.50530468495820 -1.49515613173548 -0.170433289324608 0.0224241058648070 0.0440127802849945 0.0849381527493053 0.328202502785593 0.763589383955419 -1.49564390619693 -2.21796983667019 -0.250786881936762 -0.695719847678344 -0.519022797210275 0 -0.47567238305845 -0.250786881936762
Rv2068c 0.473396148473542 0.479267667436325 -1.11425569504937 -1.97896208999831 1.02820197427862 -1.52140320431949 -3.25035916246918 0.341464100405296 0.0565110311137369 -2.27336875550461 0.32879570573887 -1.54336298870892 0.365259885707895 0.774880713862163 0.92460466937242 -3.07158362001589 0.193613796428917 0.277275164319398 1.03872775245566 -1.73893977613206 -0.928895694754379 0.145798547340219 0.590928865080238 -0.0630458434967092 0.331613740386314 1.03386736930897 0.397508794491444 -1.07126578326079 -2.12258336583165 1.04569259542645 -0.557308921120643 -0.516606121882323 0.179349159803118 -0.77630286518901 -0.0384599034631482
Rv2114 -0.062603296070968 0.0924072026067146 -1.09929055954489 -2.84105352041762 0.470469724834256 -2.25025800227594 -2.88371663671670 0.254633215065388 -0.116864387290142 -3.30126955020639 0.236704146589538 -1.95424965494687 0.223823332496259 0.397522302791789 0.289146398093924 -3.23368100539249 0.0790060117830207 0.700293092811222 0.662656494618996 -2.24447020616975 -1.75432576111120 -0.697303800011767 0.0590977905041337 0.137096012766555 0.198643376498916 0.314230837627494 0.264705306703149 -0.953589338206812 -2.57330672255453 0.0501728865363532 -1.10843989406267 -0.561007341792006 -0.00832739624044209 -0.47913523466854 0.421466023066636
Rv2144c 0.72075469212657 0.506421181583259 -0.335060002156775 -2.05222754671163 1.29345824021994 -0.460040791871206 -3.8851751040719 0.450507684704436 0.56641985083197 -2.60953886435792 0.777326400473685 -1.00532210154147 0.875385738372534 1.18915837962165 1.55190720210368 -2.14094187571831 0.508311263232488 0.157090706468067 0.288516913412673 -1.79040991118123 -0.78914448914 -0.081739882386135 0.427083202135493 -0.738951722819396 0.365199868011532 1.48253663377716 0.751511015593608 -1.29204391095602 -1.48954900207236 0.596203164190751 0.512904726942736 -0.285938915302598 0.0623147998591379 0.415915559475833 -0.272637270149541
Rv2445c 0.438336314243955 0.6534362496022 -0.333616987167972 -2.15063054454824 1.09738621202672 -0.562773242664621 -2.91279213780314 0.342609932679682 -0.110602065058694 -2.62428031057501 0.43471163710187 -1.43192399764498 0.271426844472470 0.474670874472418 1.31270439929931 -2.58621942714165 0 0.39285352182279 1.31616088163997 -2.30350859030546 -1.10413750333459 0.120983075149404 0.87001593761513 -0.806996466895392 0.95690360664807 1.07830080686764 -0.0970079175869063 -1.12796792158651 -2.19113222008579 0.441148443112249 -0.61315726303743 -0.708268747531547 0.0658499374334868 -0.290970652007658 -0.128739928500406
Rv2950c 0.96789787326728 0.572500872422755 -0.619096309619113 -2.22645791561733 0.86496386837388 -1.41104372356091 -1.85894023375139 0.541253144753169 0.334612540523381 -2.06603780347508 0.250332060800284 -1.94676857068001 0.413897670744786 0.278331191443655 0.713135505168043 -2.29462990258190 -0.0410573214342054 0.471641277440452 0.384870795500907 -1.32964493389710 -0.768711479353934 0.342013868327379 0.166964436134364 -0.373737319244464 -0.110985867511811 2.07824700770407 0.214269327359592 -0.53183806341042 -1.53050288527045 0.704325361117718 0.0230267402476737 -0.0129413206994817 -0.0547417184722462 -0.151420304504037 -0.177475373709056
Rv2954c 0.283312307075874 0.805980075416771 -0.564628250189928 -2.35497252882219 1.10131288672684 -1.15734478924373 -2.54977500615218 0.747426602309921 0.390213178901394 -2.12433451575743 1.10751652488516 -1.31326940112908 0.682279523506573 1.02260923777649 0.935396807695682 -2.42257392122137 0.473622230591392 0.566524447774188 0.355776786795414 -2.91357958232305 -1.45896745286986 -0.209679231231371 1.14665376988087 0.0873420033610185 0.0521726727858648 1.45905576176586 0.580614321518425 -1.10312461431694 -1.88956117361035 0.608959468408502 -0.997468278322421 -0.0558558748226631 -0.0407325221044015 -0.00892768632377672 -0.424791893448271
Rv3102c 0.198675903175081 0 -0.3458690585941 -1.43111304612594 0.76291670357497 -0.94836527517649 -2.21018074920303 0.529423252763105 0.0784408424687138 -2.54385515328628 0.609327585042895 -1.36732763772397 0.151906992437652 0.144310735642103 -0.37300258437153 -2.79967028515680 -0.08942380415974 0.0429972096545477 2.0265697125492 -3.04780891933582 -1.51073172381105 -0.175352555176594 0.552477657836714 -1.55510281863907 -0.283830588721977 0.869621298130377 0.438136839239605 -0.553773043777088 -1.52948252834215 0.432893697977231 -0.409788261721126 0.300743464357833 0.250598918420737 -0.134181210637455 -0.281730579882878
Rv3218 0.103548195386422 0.382034108550593 0.414256593882121 -1.90597783469509 0.799858191787434 -1.67159924207898 -1.65104796706279 0.415429097742948 0 -1.87682992918722 0.64485915849576 -2.09325755012398 0.235686119746993 -0.087988233414222 0.420278313934344 -2.61492039070806 0.0931251485034288 0.799084443650242 1.06745486406395 -2.93705624192368 -1.88539622497905 -0.306617585913447 0.349057860096745 -0.111635511007317 -0.480097874842242 0.985506553778912 0.384973003789684 -0.457333552562867 -1.72084420335657 0.440881403958316 -1.4005359354251 -0.222571781226917 0.41535592092216 -0.0640077571305787 -0.485938946565615
Rv3623 0.340246185406298 1.08001854516518 -1.29924032901925 -1.06544909528063 0.684397939522384 -2.09063243725675 -3.31797749766845 0.84410079271632 1.03065768602299 -2.37278906351824 1.48461853490317 -0.981633202874638 0.435874855431831 0.84160572186358 0.862636357951014 -2.96981245905761 0.719277772030594 1.03957727237757 0.44388716763191 -1.34993463011982 -0.252086654865734 -0.491133334679391 0.548846371495981 -0.984785483449028 1.80250368055800 1.20737299469001 -0.0410807673954343 -0.85548962269085 -1.45198392229167 0.00065871329078255 0.419791820313393 -0.486697089148689 -0.130551855636053 -0.3200054516128 0.0326260008414083
Rv3747 0.350561996593759 0.621921922573435 -1.38770475773498 -1.29350186046875 0.626698994303628 -1.77727488235749 -3.33865947665992 0.846654873196979 0.738698368293176 -1.94245326048902 0.835459466603171 -0.0881952590007822 0.593003463441777 0.903166511943858 1.08036823203829 -2.54075020550103 0.400940903270345 0.804410785245798 1.11156690928125 -2.23765376224807 -1.05193394953520 0.0816601345904677 0.65249683822082 -1.12511411528953 0.633893370349094 0.432349805737207 0.157707964220220 -0.713352829002746 -2.53474088475891 0.765998783895466 -0.76414823539623 -0.986070994882464 -0.256471126609722 -0.874415503205182 0.0339769345926035
[+] Show/hide bicluster #138 motif PSSM #1. bicluster 138 motif PSSM #1 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0 0.75 0 0.25
2 0 0.375 0.625 0
3 0.5 0.5 0 0
4 0.125 0.25 0.625 0
5 0 0 0.875 0.125
6 0.875 0.125 0 0
7 0.625 0 0 0.375
8 0.5 0.25 0 0.25
9 0 0 0.25 0.75
10 0.25 0.125 0.25 0.375
11 0.125 0.25 0.625 0
12 0.75 0.125 0.125 0
13 0.125 0 0 0.875
14 0.125 0 0.875 0
15 0.25 0.625 0 0.125
16 0.023106 0.914394 0.039394 0.023106
17 0.148106 0.164394 0.664394 0.023106
18 0.898106 0.039394 0.039394 0.023106
19 0.273106 0.164394 0.539394 0.023106
20 0.125 0.25 0.5 0.125
21 0 0 0 1 [+] Show/hide bicluster #138 motif PSSM #2. bicluster 138 motif PSSM #2 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 1 0 0 0
2 1 0 0 0
3 0.333333 0 0 0.666667
4 0.666667 0 0 0.333333
5 1 0 0 0
6 0 0.666667 0 0.333333
7 0 0 0 1
8 0.333333 0 0 0.666667
9 0 0 1 0
10 0 0.333333 0 0.666667
11 0 0.666667 0 0.333333
12 1 0 0 0
13 0 1 0 0
14 0 1 0 0
15 1 0 0 0 |