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[+] Show/hide bicluster #136 rows and columns.
bicluster 136
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #136 rows (genes).
bicluster 136 genes
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #136 rows (short gene names).
bicluster 136 short names
Mycobacterium tuberculosis H37Rv
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short_name
[+] Show/hide bicluster #136 rows (long gene names).
bicluster 136 long names
Mycobacterium tuberculosis H37Rv
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long_name
[+] Show/hide bicluster #136 rows (NCBI RefSeq gene IDs).
bicluster 136 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #136 gene upstream sequences.
bicluster 136 upstream sequences
Mycobacterium tuberculosis H37Rv
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upstream
[+] Show/hide bicluster #136 columns (arrays; conditions).
bicluster 136 arrays
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #136 ratios.
bicluster 136 ratios
Mycobacterium tuberculosis H37Rv
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GENES ARP4 Ascididemin_Natural_product BZA Cap CCCP Cerulenin Clofazimine DCCD DIPED DNP Econazole Eta GSNO GSNO_CFZ GSNO_KCN GSNO_menadione H2O2 menadione methoxatin Nam NaN3 Novobiocin Procept_6776 PZA Rox SM starvation Tet TLM TRC TRZ Valinomycin X_111895 X_59 X5CL_PZA ZnSO4
ORF00915 1.24393351039542 0.387566751551482 0.187358692916323 -1.05154235342142 1.79049801700749 -0.75227300211571 -0.615897507677334 2.6321102322139 -1.60305335089628 2.06176501715364 -1.09113302829126 -1.23758627232406 -1.00479123388683 -0.75265060622167 0.961607890189727 0.572795153113823 0.513714281704928 0.353286324552339 -1.01816751074174 0.169951239240134 -0.832106991959807 0.552375750735095 1.21635076157036 -0.354417798350517 0.452374859451311 -0.751078574433161 1.04207154056115 -0.668110032200272 0.0348858563465412 1.26387648543584 1.30340249043409 0.964209251078205 -0.306219594985646 -0.604042451012416 0.144588909590024 -1.03327813662811
ORF05088 2.13406061534089 0.322290998043766 0.0856672396012766 -0.465526108045876 2.49709190538566 -0.696951490474759 0.5885539413092 3.11234794177558 -0.418853018554556 1.32347323121244 -0.271362151174643 0.0367714921544547 -0.257030306835343 0.640908487959524 1.09092166597694 0.84962857671488 -1.07575596426716 1.04011614641928 -0.732763436311463 -0.0906550253153545 0.578474272513213 -0.256618147466931 1.57982579219512 0.134761025174591 0.622095637806274 -0.145758783825728 -0.0243171385820555 0.464619937847657 -0.0553955701786259 1.04877520827926 2.81424641705671 1.07182182557609 0.410901113334388 -0.262136066496614 0.0242944261646996 -0.251814556016334
Rv0015c 0.36669386208317 0.007378084494728 0.0158398993052925 -1.34658739065736 1.3778506136862 0.275456076180827 -0.0483735049717639 3.18996264219937 -0.309490281045033 1.75479587291876 -0.137152830662791 -0.484240407026470 -0.149107526058036 -0.226023164183235 1.29536873213700 -0.303318011909006 -0.668484912151808 -0.316737813746395 -0.116759511791713 -0.365316250742831 0.0266675315785445 -0.223863490899758 1.69946841380435 -0.109130881370047 -0.979993057002185 -0.562895178718526 0.431191056026348 -1.94296394928037 0.404481170072626 0.710117686463434 0.455211843589683 -0.551882152106165 -0.231936064327965 0.940474454350736 0.100841564857502 -0.47847078056923
Rv0571c 1.90153485392816 -0.034258251133951 0.111839229507060 0.161047545173517 2.91162753423254 -0.85048764745918 0.324587448056282 2.44929479932801 -0.177420877681725 2.47424967664116 -0.497168392089722 -0.543806838139872 -0.460928118633577 0.572537165689275 1.08251871969743 1.07964029335201 -0.576765929679636 0.305966046299198 -0.824780461213332 -0.0277026538798469 0.221099610597062 -0.0585499542482935 0.378088148894508 -1.03074758061424 -0.351086534339312 0 0.926087025415988 0.271048728671892 0.235169988972644 1.12140781732289 1.08871400684545 -0.75800230896307 -0.186431141972993 -0.243917443011166 0.373279889119622 -1.96749141559671
Rv0615 1.92934896114365 0.113156022897330 -1.2416487214095 -0.669452269681865 0.861295814795012 0.0174850636229859 1.55552591481088 4.0326206884569 0.165400173725610 1.68771827384468 0.230406669428134 0.336779189278652 -0.321894899570983 -0.334820107020128 1.53706616149495 -0.456337826538919 -0.496105171246629 -0.275573234237173 0.0879427390211518 -0.855054227143802 -0.0378916582126679 1.3570547716117 1.39836117744046 -0.250966634280955 0.202551298455303 -0.1286969483929 -0.419577289951236 0.357212002680535 -0.0298842080648047 -0.762725733921631 2.42351177207952 1.14139483645687 -0.0424359226384471 0.485684628625291 -0.532849261322925 -0.0999315390202928
Rv0981 0.78020889271526 0.152149519724983 -0.92713830957736 0 2.07660247367487 -0.47441761566704 1.88602504639892 2.52647150450870 -0.132579583124635 2.61418419090425 0.848505474423702 -0.618992851373354 0.0143389461721114 2.01888114846598 1.30731422295859 0.82693472376467 -0.505144156938641 0.792836762771858 -0.540490944159275 -0.749267788017615 0.856959558891751 1.39206882338929 0.652825436733277 -0.968801787915983 -0.643013253088241 -0.596847079534879 0.263259101126493 -0.0127405093129781 -0.331232963407598 0.311527860651199 2.68034040192448 0.396572346524046 -0.0602387377689441 -0.567623222119475 -1.21328097002847 0.453543729855575
Rv1027c 1.10595976481162 0.471583607241934 -1.07643317613909 0.0682909109282813 2.09913715326194 -0.265074304641334 1.65855332047426 1.41772484536143 -1.32796517155111 2.04864720979721 0.546130009801847 -0.0742458423468252 -0.239964974522331 1.20175735207090 1.03187240730106 0.79085751540326 -1.35088034445510 0.87952132046066 -0.158673153760249 -0.663012134311849 0.805253313523572 0.15409805571681 -0.0838615396638127 -1.17924886149262 -0.232702512975256 -0.446147139509161 1.13214832325805 0.315648471918711 -0.507658627237745 0.311715401108375 2.44773502764498 1.09646047303154 0.173337823549865 0.0394418489726676 -1.09026320386841 -0.278255888356887
Rv1065 2.45221628250351 0.049927521914222 0.0686709040852829 -0.533405884217351 2.06197419882443 -0.439539446714822 0.380021825429916 2.47606787730162 -0.530508412771741 2.80034895665222 -0.412149357616953 -0.678091027666846 -0.973060511528972 -0.165949668176368 0.256866489806011 0.519127295442726 0.255002139106485 0.111725548311661 -0.386431626607598 -1.08580110454408 0.0124704062417800 -0.069831612259809 2.08168479233479 -1.22813863085956 -0.953692779730556 -0.076954424164645 0.232620829310626 -0.573399995954715 -0.111839996112235 1.02044543577286 1.18204646056536 -0.479911169433568 0.285348505641608 -0.601915447579857 -1.68512849211382 -1.9354503631381
Rv1095 0.91399714449197 -0.393974367433236 0.581109762110019 -1.14947443671104 2.30673463660452 -0.542560788622444 -0.0102985035889024 1.63508785999475 0.116889751093821 2.07754696107562 0 0.307740220701073 -1.02472216774886 -0.520282178345785 0.410382258266359 -0.866659285919656 -0.180650129793011 0.255273673043405 -1.23991675177499 -0.212332863712642 -0.275462267322611 0.697297808801038 1.52682621313044 0.236460562671441 -1.37964311942433 0.0178134790819618 0.379624251350664 0.41477319705972 0.231133874546431 0.427618427608132 1.27949696473502 0.0906966906199687 -0.930739936429197 0.291904409945273 0.281910695612186 -1.76280896602773
Rv1127c 0.732551409457206 0.259280914813397 0 -1.24274719171381 1.83422438534833 -1.11333595436280 0.658264234911901 2.34694646333063 -2.07079656886217 0.72926070026781 0.172610199423257 -0.608364242189485 -0.299281785586704 0.0264732687221760 1.71165548499419 0.92433933242733 -1.86463048937189 0.374152324215808 0.263607505416275 -0.506656254985559 0.736742143584176 0.989063295630022 0.767465953993441 -1.14172682550511 -1.84039171753022 -0.930635252216682 1.00952447656869 -0.98096110832673 -0.459721611602176 -0.450195969611938 1.31841844114262 0.426698640868981 0.0192021624996135 -0.064329283445854 -0.110218494609775 -0.152591212967005
Rv1845c 1.25968024421546 0.404225599300899 -0.184564514551287 -0.758083146041797 2.33466146908611 -0.898039092740559 1.43193999792065 1.79698138325993 -0.786614174898256 2.14639828029559 0.504961478315194 -0.0902329622306546 -0.243809394227469 0.227277436407798 1.36770304653401 -0.720438970002444 -1.14321535602046 -0.0969414164326022 -0.646050461162477 -0.382363314352145 1.22980306499866 0.56608349270019 2.07837188408561 -0.373953564146993 0 0.20379322111469 -0.0914929471542296 0.542457530843683 0.371671065334037 1.2972354521292 1.19216986466696 -0.793156862956844 0.270839707116158 -0.420883315327708 0.0719505093383431 0.775945955679576
Rv1846c 0.97695880592667 0.455132384115056 -1.05125522584090 -0.574857374551122 2.17407289477079 -0.826770864576614 0.76662844630284 0.722643194794588 -0.513236966479211 1.39934045358121 0.250271501674243 0.492284758896113 -0.357810377018139 1.07310183269396 1.79943699833254 0.77158996778125 -1.27886523682441 0.559165961870426 -0.937743356229251 -0.507953757356838 0.885928764778447 -0.197451183096704 0.686714622994605 0.0550735166938752 -0.762460038123056 0.0341635859810248 -0.319321318924208 -0.618579091976569 0.138083550580811 0.590479318315774 1.2386943967744 -0.450807300989182 0.239449557154116 -0.256864668616592 0.56536517872388 -0.339795168548052
Rv2005c 3.96725635404835 -0.0176023469003987 -0.465044787510834 -0.735287231998578 2.16729372775385 -0.427754022055857 0.756349632927235 3.54458496111001 -0.223700015754701 2.4776336584336 0.324868837247901 -0.204877870561904 0.877831433956542 0.33296750931094 0.633237198612389 0.618442224334355 -0.317749714285118 0.0193696984114947 -0.152004174077599 -0.683739360620845 0.240370040718044 0.383312412613429 2.26657123087492 -0.689878655249003 -1.03316653698097 -0.508965143550822 0.230102675104021 -1.44223871845432 -0.150275437126270 1.16391521702313 1.50870089974213 1.40500062777129 0.182610297129561 0.230960915654466 -0.488605921787303 -0.194876308654360
Rv2133c 1.42774212031506 0.694368764443477 -0.859866668769647 -0.717475063180135 2.15354990935138 -0.124841479433439 1.35971024587539 2.50431709803417 -0.377637125492342 2.20797306390755 0.414161776795996 0.0543748099599004 0.335415868826259 1.13935272469176 -0.250913696817621 0.159707302852072 -0.443641332508705 -0.342007188144681 -0.538287612521432 -0.815023491133785 -0.808033599774595 0.516320337807039 1.23499344771055 -0.728154176951883 -0.574451907884069 0.175360718857220 0.125848946848515 -0.575157094639151 0 1.03615844116272 2.07449639475514 0.338545128018257 0.475505179483407 0.425895482972008 -0.827504885801075 0.0730445458780032
Rv2164c -0.0292692523655161 0.654677427896432 -0.217478925280055 -0.812343188594866 2.42887771334621 -0.141925502419693 1.03722483042465 3.22108017937818 -0.753035653502448 1.64739847110397 -0.000315484370886604 0.101421420963666 -0.0451452600322286 0.464117705961301 1.6893345686582 -0.784413586426233 -0.00944238893383676 -0.139916750333384 -0.39955840695367 -0.292353546874996 0.351483680720007 1.45543342389725 1.26272422743555 0.230423065102876 -1.31917287088767 -0.0401501787282984 0.968206539264614 1.41864367264117 0.0159802278578985 0.278527169014799 0.919604170372192 0.522753503242859 0.162236906837320 1.42580251156678 -0.228828905317103 1.07407029593768
Rv2237 2.12686511813573 -0.00810268868739754 -0.234978476037115 -0.299931666319279 3.21272519642587 -0.677279179160297 0.848409519436923 2.55535140245023 -1.78357253233536 2.13795906694780 -0.619381177777974 -0.432066287904627 -0.908184424097545 0.117441584608738 0.690240314280434 1.44014929209036 0.0669802496427844 1.07461744339274 -0.587884523006872 -0.494145450322056 -0.205622476578230 1.18932286312746 0.156184805930550 -0.812944495366027 -0.950693088646205 -0.366068823124354 1.32897085450829 0.436882213223781 -0.519338637112869 0.793571336130989 1.94679030434119 -0.401026560421542 -0.203572309493546 0.416239570149172 0 -1.95147813924830
Rv2365c 1.45504141643208 0.325416994815665 -0.640666069125827 -0.717018394494351 2.36850581753461 -0.145728032491176 1.52002635969593 2.35050929847337 0.157895848564512 1.23085102055114 0.262027823574325 -0.146442157137170 -0.206856305447814 0.200278140304326 1.50667653432273 -0.114714664525702 -0.184334798250095 0 -0.134603314257654 -0.300819179809176 0.346693212873023 1.02140154037592 2.29117875856799 -0.484446223882473 -0.317597797105939 -0.493858159783815 -0.198579391886663 -2.18259929569687 0.0850370525805063 0.535341311550243 0.155441505853379 -0.517873681898038 0.327921139559162 0.394680561877099 -0.131602477858791 0.164930283452555
Rv2471 1.12746987289314 0.220809511901860 -0.870469143452427 -0.387639000477961 0.980991882945374 -0.137968951343593 1.33034189759416 3.75555590388021 -0.812965819007606 1.54221073589096 0.485483631549057 -0.0659866774677302 -0.157738651764013 -0.195646119660446 1.53249131637767 0.0579791598506503 -0.0981212149328146 0.510583794780157 0.707898809306605 -0.818522091204844 0.482475641784629 1.18532548693118 1.56910637228032 -0.375967143998153 -0.0525485738338266 -0.255161691098509 0.371804804720568 0 -0.316775956801616 0.112931781250307 0.471900838818455 0.200555761407056 0.0792468748512223 0.668491960637808 -0.700651438700712 0.512316824780539
Rv2551c 2.63798190966490 0.835904589435851 -1.14001404769991 -1.14428206903011 0.909212560360777 -0.115722142670486 1.02937868729493 2.81090074209883 -1.34544369828809 1.76128219917582 -0.301035623103445 -0.717613826189338 -1.10496073211928 -0.50176951601233 0.777693132848845 1.30822949416577 0.0826580467266275 0.0914613649312976 -0.224899188653947 -0.8741142914739 -0.323565858721401 0.158207547924947 1.36467876868352 -0.859919917012496 -1.46676029581283 -0.863050752441917 1.05100911016302 -1.07494284496477 -0.156646469734309 1.02005362903959 0.946840211501746 0.3853499271269 0.727593553659287 1.05065827120258 -1.10561697809619 -2.18342525262472
Rv2558 1.86759998180264 0.537575292118296 -0.5451257531978 -0.364235790341239 2.23742144711111 -0.370313424813953 0.989677773885642 1.93564141007581 -1.44338440903698 3.39124564389897 0.270554428488880 -0.376119036697787 -0.302657969711593 0.198815759346464 1.18708600335563 -0.236242879857956 -0.0282482258222022 0.20861433431932 -0.964164908546376 -0.997710214549364 0.557552210442497 0.204341057493984 1.8427412500049 -0.585668908803607 -0.579216701014491 -0.960304313518871 0.797554877647262 0.207468417975106 -0.844033728683752 1.22641540641536 2.35571931783605 -1.10180889260902 0.239758619192191 0.517868547314473 -1.60762635746858 -0.334029543599376
Rv2675c 0.898871500821373 0.300004648089836 -0.124372972035661 -0.601538671857414 2.35393328154525 -0.0865969119699864 1.81800631398504 2.55663945405009 -1.94061986941421 2.46722345295048 0.982834566547985 -0.792787090843022 -0.50570293866232 0.233760110695644 1.55198937792810 1.19338980592409 0 0.836568235980687 -0.0481112878257312 -0.197366581230626 0.0860663629089182 1.24220840990653 1.14816099670949 -0.488760312043116 0.0935817594139257 -0.640057782616248 0.356249910724421 -0.753728824762081 -0.269478070214695 1.22774280645751 2.21364000256484 1.61419150064845 0.727976534887385 0.557365275126575 -0.135926104233376 -1.85609668092813
Rv2853 2.53242473230428 -0.199848049651657 -0.369014044521286 -0.44852264675601 2.57192478322548 -1.00339745509140 0.810630921540555 2.89440369135207 -0.700355067356665 3.05989566346878 -0.0969652361584557 -0.705092618656751 -0.388735109900419 0.133489454182052 0.987704407923819 0.322724138539617 -0.395907971466997 -0.0399993030827851 -0.355168478945750 -0.477735803802338 0.793245148347432 0.860039432380283 0.083344573356003 -1.10434200874841 -0.85706651473799 -0.482227147341355 1.05429324740350 0.201737420500443 -0.0869244385190504 0.379799734861726 2.05128399184854 -1.83670379963429 0.0195650446565859 0.226085823500402 -0.101647427587702 -0.715161290501983
Rv2925c 0.387146841047158 0 -0.170661397087446 0.272374776794882 2.52755695123099 -0.525497073537237 1.00489279114123 3.08490963765273 -0.168067581059526 3.5920612057094 0.284591955352092 -0.00626863084078092 -0.553225296617006 0.297708651369894 1.71200320121871 0.608566940002737 -1.14770014794038 0.269585337466357 -0.213278576492988 -0.231207878543427 0.82289782536011 1.9390757134791 1.41894782249538 -0.355688823968032 0.377218416211212 0.321125259067315 -0.196581024585154 1.01001308239698 -0.173777064626469 0.990797394616091 1.85793847377158 0.584215674794992 0.0223902331604334 -0.0838515250520509 0.276610199459355 -0.633427106567722
Rv3289c 0.834116372322447 0.0599990810268282 -0.770248570615264 -0.0319692528455011 3.14398155537949 0.155577852500724 0.538511325044231 3.66376372134368 -0.814491731600144 4.2061349977343 0.770839169009746 0.0953040194402082 -0.053711517144537 -0.0385865936433733 0.769738245799558 -0.647183857010219 -0.130281763283088 -0.583910555548078 -0.00628651267240398 -0.630416717001788 -0.0384278632633046 0.456220188852255 2.00761640024557 -0.362305681538541 -0.0298557728166513 -0.392503319606253 0.422336512804590 -0.183930331574173 0.0632082918209891 0.683519836883445 1.72880836514585 0.601015699432638 -0.071793424671501 0.642922747086768 -0.782589556122173 -0.679763220972344
Rv3757c 1.96518619220533 -0.288852817483922 -0.840160118201659 -1.88454823871161 1.74043345209514 -0.701332008918694 1.88138938480808 2.31485541972564 0.158457192925028 2.57275507331310 -0.181825008428401 -0.591134274907801 -1.31254260568709 0.0891284796920944 1.30424836661686 0.421569868674888 0.221362927790051 0.862614876945873 -0.263684529398277 -0.600082043673318 -0.303158360726457 1.37435621957272 0.837891161465227 -0.465414271545872 -1.15177075031033 -0.493278606256433 -0.677515287614596 -0.627759070104254 -0.56264236389506 0.427881254090724 2.46770901572828 -0.0222715021056023 0.357805672341081 0.267580569083218 -0.522412917541522 -1.15817786890719
Rv3905c 1.67241967146621 0.293593275013333 -1.56805292905866 -0.275953171657893 2.92966538521277 -0.623312161274872 0.228138111644118 2.79016183952372 0.206336186282396 1.86371652308327 -0.752304149166921 0.0374628939466408 -0.180963994457863 0.393248457404809 0.442236210131794 -0.698380574531111 -0.190169300903154 -0.0330962668524783 -0.978392775975103 -1.24767414249871 0.385028955975644 1.54473315428733 0.452874278957369 -0.906104706567716 0.0258035312735421 0 0.9639367956473 0.705314081342875 0.336996529923952 0.272931570630668 2.26087100640535 -1.05288178309864 -0.063082017047177 1.45557780468195 -1.54673027203772 -1.06903252585017
[+] Show/hide bicluster #136 motif PSSM #1. bicluster 136 motif PSSM #1 Mycobacterium tuberculosis H37Rv 14x4
POSITION A C G T
1 0.136364 0.818182 0.045455 0
2 0.181818 0 0.727273 0.090909
3 0.318182 0.272727 0.090909 0.318182
4 0.136364 0 0.045455 0.818182
5 0.181818 0.227273 0.590909 0
6 0.545455 0.136364 0.181818 0.136364
7 0 1 0 0
8 0 0.5 0.5 0
9 0.636364 0 0.363636 0
10 0.090909 0.909091 0 0
11 0.136364 0 0.818182 0.045455
12 0.454545 0.136364 0.409091 0
13 0 0.181818 0 0.818182
14 0 0.272727 0.727273 0 [+] Show/hide bicluster #136 motif PSSM #2. bicluster 136 motif PSSM #2 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0 0.9 0.1 0
2 0 1 0 0
3 0.1 0.1 0.8 0
4 0.5 0 0.5 0
5 0 0.3 0.5 0.2
6 0.7 0 0.3 0
7 0 0.7 0 0.3
8 0.1 0.8 0 0.1
9 0 0 1 0
10 0.6 0.1 0.1 0.2
11 0 1 0 0
12 0.2 0 0.8 0
13 0 0.6 0.4 0
14 0 1 0 0
15 0 0 1 0 |