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[+] Show/hide bicluster #135 rows and columns.
bicluster 135
Mycobacterium tuberculosis H37Rv
13x36
[+] Show/hide bicluster #135 rows (genes).
bicluster 135 genes
Mycobacterium tuberculosis H37Rv
13
[+] Show/hide bicluster #135 rows (short gene names).
bicluster 135 short names
Mycobacterium tuberculosis H37Rv
13
short_name
[+] Show/hide bicluster #135 rows (long gene names).
bicluster 135 long names
Mycobacterium tuberculosis H37Rv
13
long_name
[+] Show/hide bicluster #135 rows (NCBI RefSeq gene IDs).
bicluster 135 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
24
[+] Show/hide bicluster #135 gene upstream sequences.
bicluster 135 upstream sequences
Mycobacterium tuberculosis H37Rv
13
upstream
[+] Show/hide bicluster #135 columns (arrays; conditions).
bicluster 135 arrays
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #135 ratios.
bicluster 135 ratios
Mycobacterium tuberculosis H37Rv
13x36
GENES Amikacin ARP4 Ascididemin_Natural_product BZA Clofazimine CPZ DCCD DIPED DTNB DTT EMB Eta GSNO_CFZ GSNO_CPZ INH KCN Levo mercaptoethanol methoxatin Min_med__succinate_ Nam NaN3 Novobiocin Oflox pH4_8 Procept_6776 PZA Succinate UV Valinomycin X_111891 X_111895 X_124196 X_241 X5CL_PZA ZnSO4
Rv0566c -0.20442001592429 -0.704576290186251 -0.027095150047683 -0.0908480767103967 -1.64371433190282 -1.01248261892764 -3.49816500168419 0.807155577799148 0.877992546457589 -0.721223014696174 0.422656240010151 0.355434070494796 -0.685787701555348 -1.01928621802785 0.235175825367252 -3.0686458626457 0.361510176579857 0.683679900361403 0.256314778342349 -1.03128540065202 0.082923197117105 0.0812302728759213 -1.69547926282426 0.222369841964025 0.00898375200007604 -2.21179521196737 -0.387354647293452 0.668296300250888 0.55507511544341 -1.80144524558180 0.397988552791743 -0.654936788688648 0.097538205658599 -0.514176493223081 -0.539024110474787 1.41039554525801
Rv1241 -0.406855506013154 -1.57329466817444 0.0743087978738207 -0.713623120386397 -0.816187725113364 -1.26732866926439 -1.53514502677305 0.332657887037722 0.546106841325138 -1.53120489082135 0.378077744249653 0.679083109434048 -0.38337848688229 -1.18329299012708 1.06982963334075 -2.45995310054438 0.134409347947968 0.453699397248182 0.764174553253768 -0.877402262313565 -0.501125531802045 -0.143017760274566 -2.355317357176 0.181831701564021 -0.917594303230364 -1.63283514961907 -0.396476670667644 1.03220133039247 0.172887968703794 -1.23182822791054 0.718511888525312 -0.160637391424809 0.273031870205638 -0.65820526956537 -0.827382051208532 1.06628466870205
Rv1242 -0.056452189298296 -1.07134646911163 -0.119107437913856 -0.38060726282952 -0.251682681694957 -1.13271211074631 -3.26431200584881 -0.150407293079070 0.397884952333327 -2.05237267164118 0.0491640883538561 0.2095419078304 0.135572300666659 -0.960649697034024 0.0968658950642053 -2.44072878076889 0.00148944867977189 0.640781227682181 1.00216912756388 -1.41284621778149 -0.0798988306299578 0.208564433802681 -2.58352373709015 0.217001587080427 -0.421641013474807 -1.56405607039022 0.345541733290158 0.913019726317424 0.0758026941397272 -1.33111527925275 0.47057020811883 -0.111501688722542 0.214984800090104 -0.776512352472277 0.172734674297159 0.831311042684678
Rv1613 -0.751620160816323 -1.03459172449534 -0.473608505500234 0.301767965815225 -0.91623298694143 -0.759208642126222 -3.17832107075124 0.321985722323211 0.514888105384947 -1.42196543008058 0.335739219895824 0.594947279005196 0 -0.919868779748747 0.898778241184372 -2.25317331183775 0.0124749481664730 0.311011351063727 0.41807196085692 -0.537324552783987 0.342958241916562 -0.222590665707976 -2.63593986735232 0.560596718779205 -0.136087261240237 -0.873336860751487 0.667478313303771 0.0159617806121284 1.10018188491143 -2.05214672583133 0.444552673410198 -0.659297981945514 0.567298545340859 -0.174041176525130 0.503120703384022 0.366333842115717
Rv1614 -0.607624564218457 -1.30390132828753 -0.482253533779022 0.755455759930257 -1.02673032609732 -0.619322577548176 -2.43618607514247 0.423132115528764 0.414145152683785 -1.31779741086187 0.0313414904462396 0.487877104548229 -0.879312748718387 -1.10337251389582 0.873373683007156 -2.45353846398898 0.372904366929968 0.363281056402766 0.455199058299 -0.985490534490962 0.234268961475636 -0.627522634089526 -2.59024287336292 0.277459219707378 -0.354937419855651 -1.16370261386038 0.270563386713289 0.0463711142361924 0.65987636248204 -2.2245657925669 0.779889650040252 -0.364532682292125 0.754128042017528 0 -0.215022487872998 0.823709310745617
Rv2068c 0.473396148473542 -1.11425569504937 -0.332192343630771 -0.161222188720507 -1.52140320431949 -1.59957237997500 -3.25035916246918 0.0565110311137369 0.32879570573887 -1.54336298870892 0.365259885707895 0.774880713862163 -0.92889035530628 -2.23321306049452 0.92460466937242 -3.07158362001589 0.650643483724909 0.193613796428917 0.277275164319398 -0.659184931188346 0.188106164186308 -0.352341674451556 -1.58569833634638 0.192671088458471 -0.407605270649318 -0.928895694754379 0.138148621663471 0.331613740386314 1.04569259542645 -0.557308921120643 0.623657065858639 -0.516606121882323 0.3024546528561 -0.77630286518901 -0.0384599034631482 0.89558823671408
Rv2069 0.339225860486397 -1.90280790322576 0.104598170770221 0.0357650089924093 -1.03141408106072 -1.17832105581585 -2.8618275139609 0.365160361824651 -0.159148955903631 -1.06351801310274 0.488508099504697 0.696540742481214 -0.673028897503971 -1.99933307122853 0.453871429856661 -2.33097857124757 0.338526771745073 0.370611343113442 0.325238037621819 -1.61247237823029 -0.132880282028202 -0.806141331715238 -1.54793033318268 0.846921704205955 -0.256324591350925 -1.05446042512511 0 0.623124924732736 0.157528931707207 -2.14272645921607 0.544703055695068 -0.0566028585461187 0.228137316953538 -0.70828794418764 -0.111616680927963 0.562162994871706
Rv2213 0.239345480422661 -0.421121668469504 0 0.326534928228675 -0.955678454167723 -0.658209326949666 -3.12612681788178 0.175875811419322 0.483135065219247 -1.919749473726 0.234326631401702 0.559811422651431 -0.743200425460354 -1.455220665924 1.05659117734433 -2.35524252170501 0.208412609189604 0.0951974818533905 0.256649039984503 -0.961436285572781 -0.32814201154677 -0.651291762818741 -0.429490837558111 0.711221142341811 -0.678004515014964 -1.57958015122484 0.160040021511955 0.555943350256095 0.46045459324424 -2.41527570685907 0.387377764402134 -0.283469740511390 0.236211518338910 -0.339872571294247 0.162528994822171 1.0835721431723
Rv2564 -0.353385355137808 -1.37257261013966 -0.219895828125261 -0.0777596080323337 -1.24298779948990 -0.645473830642321 -2.91863960102792 0.560996391475093 0.359114181068374 -1.60080370434217 0.603694086763613 0.587615265706358 -0.311266477784279 -0.876355037904514 0.973094668518574 -3.09769984356276 0.0333980342412887 0.454049257352809 0.696463413378516 0.595749286791785 -0.0269175072101831 -0.839352962522863 -1.99272616522632 0.543549898621286 -0.47187495423134 -1.34281104352441 -0.15196726935243 0.61056763348719 0.354098025072467 -1.75444314744170 0.560180843393353 -0.268986816279619 0.0852590632571913 -0.00937400726804313 -0.119295776022135 0.808361690860935
Rv2911 0.553350250282505 -1.19029215659919 -0.239976161135016 0.157484543155697 -1.30875209423696 -1.04977261923785 -2.80654092938486 0.592287574127778 0.478989994444087 -1.47547280410060 0.481852697058292 1.05844863615710 -0.150169178674494 -0.939162495381244 1.13000221512824 -2.81419074633576 -0.27872244980827 0.0929483930854522 0.327966473947615 -0.290987815225269 0.165978745873491 -0.467057595944811 -1.85351760553954 -0.297896922993976 -0.650075963636163 -1.16443832416950 0.903171254051323 0.848718989058842 0.194747827923501 -1.39097916749327 0.14911965707838 -0.398425116504307 0.117390730280375 -0.0903786375855925 0.196026874991792 0.363026962023825
Rv2945c -0.346487139532692 -1.07409807934586 0.514624206462871 -0.291424711974082 -0.73560713601539 -0.709935580660411 -2.11053140778348 1.02537761837414 1.20263188303921 -1.48454708678163 0.914350106216207 0.623871121183454 -0.413265930503115 -1.25539162348437 0.672551398194554 -1.63048191349392 0.125715404610879 0.681491984112471 1.12139030844272 -0.497192851333409 -0.333570058757212 -0.519522371418473 -1.90536651910425 0.170567347839385 -0.989946734824064 -1.11166272668903 -0.243001297941803 0.578520893979273 0.722932420225534 -1.52701913959589 0.882615188735438 0.152895817513879 0.52440283520779 0 0.012926787227086 0.856337449395707
Rv2952 0.0707720127804718 -1.23665678765100 -0.507003498200603 -0.737955583359927 -1.14688520557839 -1.13631285372513 -3.11294196230704 0.681749856032235 0.588982458175432 -1.68136232392592 0.846699487462376 0.835357655732868 -1.12557855782114 -1.81432318441845 0.894300518303547 -1.83608707884881 0.111025471962316 0.775373778353565 0.491172374660107 -0.520979195097233 -0.307910315409908 -0.94075099873542 -1.4613807940829 0.499042258699722 -0.925441302036579 -1.13668512832499 -0.138758403687988 0.565150683971266 0.432883296186959 -1.32284402746791 0.463873103406027 -0.476574776185809 0.0678679248218424 -0.0386764744630769 -0.0897440917826356 0.941308462514335
Rv2954c 0.283312307075874 -0.564628250189928 0.368094269172911 -0.93932543706372 -1.15734478924373 -0.777551773732028 -2.54977500615218 0.390213178901394 1.10751652488516 -1.31326940112908 0.682279523506573 1.02260923777649 -0.531960178646948 -1.83952733311854 0.935396807695682 -2.42257392122137 0.224082422948416 0.473622230591392 0.566524447774188 0.101082577321052 -0.401915929630704 -0.967599587133285 -1.56915640400392 0.650327236224762 -0.160749599792475 -1.45896745286986 -0.33662975759317 0.0521726727858648 0.608959468408502 -0.997468278322421 0.53509773402634 -0.0558558748226631 0.336949940079908 -0.00892768632377672 -0.424791893448271 -0.0665220556413838
[+] Show/hide bicluster #135 motif PSSM #1. bicluster 135 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0.222222 0.777778 0
2 0.222222 0.444444 0.111111 0.222222
3 0 0.111111 0.111111 0.777778
4 0 0 0.777778 0.222222
5 0.333333 0.444444 0.222222 0
6 0.111111 0 0.222222 0.666667
7 0.111111 0.666667 0.222222 0
8 0 0.222222 0.777778 0
9 0 0.333333 0.333333 0.333333
10 0.111111 0.777778 0.111111 0
11 0 0 0.888889 0.111111
12 0.111111 0.222222 0.444444 0.222222
13 0 1 0 0
14 0.333333 0 0.666667 0
15 0.555556 0 0.444444 0
16 0.444444 0 0.444444 0.111111
17 0.555556 0.111111 0.111111 0.222222
18 0 0 0 1
19 0 0.222222 0.555556 0.222222
20 0 0.444444 0.111111 0.444444
21 0.555556 0.333333 0.111111 0
22 0 1 0 0
23 0 0 0.888889 0.111111
24 0.888889 0.111111 0 0 [+] Show/hide bicluster #135 motif PSSM #2. bicluster 135 motif PSSM #2 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0.166667 0 0.833333 0
2 0 0 0.833333 0.166667
3 0.166667 0 0 0.833333
4 0 0.5 0.5 0
5 0 0.333333 0.666667 0
6 0 0.333333 0.333333 0.333333
7 0.5 0.166667 0.333333 0
8 0 0 1 0
9 0.5 0 0.5 0
10 0 1 0 0
11 0.166667 0 0 0.833333
12 0 0 1 0
13 0.5 0 0.166667 0.333333
14 0 1 0 0
15 0.166667 0.833333 0 0
16 0 0 0.5 0.5
17 0 0 1 0
18 0.333333 0.666667 0 0
19 0 0.833333 0.166667 0
20 0 0.833333 0.166667 0
21 0.333333 0 0 0.666667 |