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[+] Show/hide bicluster #132 rows and columns.
bicluster 132
Mycobacterium tuberculosis H37Rv
28x38
[+] Show/hide bicluster #132 rows (genes).
bicluster 132 genes
Mycobacterium tuberculosis H37Rv
28
[+] Show/hide bicluster #132 rows (short gene names).
bicluster 132 short names
Mycobacterium tuberculosis H37Rv
28
short_name
[+] Show/hide bicluster #132 rows (long gene names).
bicluster 132 long names
Mycobacterium tuberculosis H37Rv
28
long_name
[+] Show/hide bicluster #132 rows (NCBI RefSeq gene IDs).
bicluster 132 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
46
[+] Show/hide bicluster #132 gene upstream sequences.
bicluster 132 upstream sequences
Mycobacterium tuberculosis H37Rv
26
upstream
[+] Show/hide bicluster #132 columns (arrays; conditions).
bicluster 132 arrays
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #132 ratios.
bicluster 132 ratios
Mycobacterium tuberculosis H37Rv
28x38
GENES Amikacin Amp ARP4 BZA Cap CCCP Clofazimine CPZ Deferoxamine DNP DTT GSNO_CFZ H2O2 Min_med__succinate_ Mtm Nam NaN3 Nigericin Novobiocin NRP_1 PA_1 PA_21 Palmitate Procept_6778 PZA Rif Rifp Rox SM Tet TRC TRZ Verapamil X_111891 X_121940 X_124196 X5CL_PZA ZnSO4
ORF03288 1.22897344812360 -0.0289030522588743 0.197791083780593 0.141984305371338 0.815005616761428 1.14032427647938 -0.381401825458302 -0.152805524446387 -0.271162604296885 -0.0314831977881206 0.330644011474539 0.0905798416214869 -0.750814205804387 2.53610737610255 -0.778350543579714 -0.234060060795312 0.815209761823379 -0.166404208597677 0.208615582583039 0.79377770160433 -0.490026103049027 -0.507835921871624 0.928115919608522 -1.09122688596165 -0.882670052236415 0.768652651943822 -1.02494353347989 3.04402287392057 -0.941336402392215 1.52295995530746 -0.368464081403970 0.697736115195364 -0.286664373913125 -0.416707756736632 0.431493043990483 -0.79735376201801 0.232813765645365 0.52432977308845
ORF03593 1.24762988801344 -0.34549885889886 1.43021134977126 -0.0752848008375878 1.69496565364362 1.52239868612389 -0.318048270624628 0.568375507703145 0.194925014857816 0.258028210892708 1.64959551972937 0.244872505702381 -0.174074085928786 0.143027794502066 -0.526044290539519 0.245802586905969 -0.18999818345355 2.44839432564384 0.472716320544559 0.723384659917856 -0.901131402794937 -0.967592415335964 0.164857171316112 0 0.39019856295331 -0.0842542111254847 -1.26227913233152 1.24862225531113 -0.218762027621891 2.31191709035862 0.326078930687837 0.144708048438535 -0.233713050100513 -0.328552683910066 0.405503406166429 -0.547891935500469 -0.101544162460082 0.160470221165982
Rv0164 0.389414728729009 0.53268882793202 0 -1.22711445016200 1.15118506767361 1.85399797382619 0 -0.0148793404635413 0.384308508313223 -1.21146124961552 0 0 -0.495414441417906 0 0.717977104610974 -0.839312388904866 0 1.60393420047035 0 1.24930482723502 -0.0687958729509386 -0.0709427691631234 0 -0.556984218194293 -0.98235777372546 -0.714794969653433 -1.00293713190694 0.80501645582917 0.668656817256653 0.505512037137634 -1.17026304970082 0 1.29429258316744 0.266102676221415 -0.264307402867253 -0.0400872077941959 -0.979764260098125 0
Rv0207c 0.098023646790331 1.20999400026534 -0.0441855644438538 -1.12433899532063 0.0340735529331273 2.02247202204408 -0.0441855644438538 0.241476792563373 -0.438372849873304 -0.0441855644438538 0.259134038477558 -1.66912986192507 -1.40751629651953 -0.0441855644438538 -1.06236531440009 -1.04061661467445 -0.0441855644438538 0.0931473731803903 -0.0441855644438538 1.70204678109277 0.210285951243952 0 0.0771942731439593 -0.229668010152961 -1.11949245812114 1.03553843868547 -0.152860100908753 -0.292190891618098 0.0112370415890272 -0.752198376144619 -0.167163440235956 -0.0441855644438538 3.015319591845 -0.471661472406808 0.303110217316386 -0.164213160739254 -1.09986098070126 -0.0441855644438538
Rv0259c 0.723685319644691 -0.0781208707922391 -0.0936521817122628 -0.232143959830061 0.794284971569727 1.04436582650121 0.0882122715283643 -0.0726110150693913 0.00816788719380849 1.24818139794881 2.26471927832012 -0.63904033793 -0.462295302169564 -0.00259364915829991 -1.09581170923966 -0.297976471677801 -0.451953255771398 0.724850602349179 1.64774278562050 1.82506921468533 -0.149687815908499 -0.217048413358095 0.25645769745422 0.223601951278947 0.293196139198588 -0.369774800626670 0.0274988604733472 1.47769839160289 0.426159890715024 0.407686669179989 0.180886932540383 -0.568337455865164 0.225309882945173 -0.314467537629897 2.6277227635332 -0.267352202644793 -0.199787220839345 -2.38141462010972
Rv0315 0.864896940773171 0.625990975885725 0 -0.362415785130972 1.71614492029366 -0.0115772087868007 0 -0.95114105245789 0.561736393795507 0 0 0 0.179545694761212 0 1.08690675965677 -0.497470391065972 0 0.87566919818632 0 1.60923525592075 -1.38615664415610 -1.28791109844312 0 -0.198864122794012 -0.467717008952878 0.208954145012246 0.434603449269145 1.13748880688671 0.524812865018846 1.73734822767374 -0.934325728493203 0 -0.0242608570862835 0.117933967258631 -0.629734245195715 -0.702868201427084 -0.642265375835721 0
Rv0504c 1.07469683546810 0.478023497547024 0 -0.503234355072978 2.78870489212692 1.67794837117997 0 0.267981219752834 0.555607877383598 0 1.5501530972902 1.86566157466712 0.0217603870183119 0 0.502189620064227 -0.166727433249865 0 0.97004128753046 0 0 -0.723415195894387 0.056035464205389 0 -0.221507220153486 -0.337070933007374 -1.04199082241579 -0.299621011974711 2.77975124058709 -0.0608785668749492 1.72646926858814 -1.18486490305354 0 0 0.0206874876817920 -1.19519230144162 -0.168282780672115 -0.635427529262379 0
Rv0516c 2.19519244759196 0.0803230504372449 -0.423688223263692 0.0474267190562302 1.39369518391247 1.87647188028950 1.11887656133014 0.840323721032514 -0.177507364058651 -0.791822686666742 2.14212966346525 -0.269193586788453 -0.473898920014523 1.08025313320009 -0.527037444015223 -0.236495550815559 0.514137238811505 0 0.109912835415995 -0.522539547225944 -0.258861639057146 -0.239841067406038 0.624573847334962 0.749412441714891 -0.375539372853628 -0.386727573201958 -0.149734044380676 1.28089665894811 0.870891464682362 1.59564404048781 0.472136148834939 0.734523404726216 0.518594667767605 -0.178743646121955 0.984775287686015 0.528232149266598 -0.419482569721386 0.319789914899209
Rv0605 0.137741821436787 -0.655819812816449 0 -0.574265106121732 -0.689993208261627 1.02934018282533 0 -0.0849892033227559 -0.401475274956528 0 0.897676431706884 0 2.15776807851921 0 0.196111153843763 -0.509065613353438 0 -0.199056995577788 0 -0.371909840930641 0.488112908995765 -0.336603953470861 0 0.605879669709584 -0.132868774461092 -1.12687555257712 -1.15129911272902 0.383456499277807 0.109497122513514 -0.325064072462232 -0.465496814829384 0 0.528962629257955 -0.269309501271334 0.735475004717674 0.0901179341802274 -0.414274077975119 0
Rv0788 -0.228358506938618 -0.46921500981889 0 -0.772405831675133 0.602756693871231 2.43547581453585 0 0.822792839268984 0.069918749878782 0 2.20917424554428 0 0.247845216082728 0 0.0465757257225372 -0.695993956874452 0 1.08008772739544 0 1.10660568741579 0.0863565719716759 0.114282520389140 0 0.678635469028005 -1.19202591617298 -0.435094921158224 0.0556743964635072 1.45539084238526 -0.479669410435153 0.270457896394387 -0.159550025721891 0 0 -0.0189295048183931 -0.305535499582433 -0.230102606062374 -0.96781007096223 0
Rv0806c -0.547295113053727 -0.131599756612523 0 -0.500879153882415 0.871649743290739 0.996138133614447 0 -0.112958110949857 -1.60938416157964 0 0 0 -0.28205746253489 0 -0.519090056181618 -0.164307462623100 0 0.946181250412269 0 0 -0.811296191292142 -1.01060742674057 0 -0.191612991045347 0.0487394431592031 -1.75396279521893 0.0893152196649218 1.95102559109525 -0.00214881196293199 0.9821527109121 -0.489655562277258 0 1.79825836845125 -0.385985026632757 -0.250617482462317 -0.484598007834464 0.366891920237512 0
Rv0886 1.12752489342623 -0.313800417682199 0.0695655248433929 -0.877004780121192 1.53965890284085 0.834460878387837 0.584326233163897 -0.028973055406374 -0.60621228776152 0.47450107016911 -0.911203268030937 2.02822612263290 -0.344124936714517 2.24614408722815 -0.226287353010783 -0.262793127670005 0.489333196817406 0.112668783761161 0.601299813068955 2.55787704445165 -0.815936933935203 -0.801665282069177 0.343005230735541 -0.471080148744857 -0.686524183952716 0.559640974983537 0.467782107693734 1.47885902056244 0.249167775367847 1.87408202143268 -0.0262667188836656 0.483137518856252 0.124566183152662 -0.531632116538866 -0.108314649662538 -0.589202577622922 -0.124727283417523 0.0984578090957974
Rv1790 -0.394308859883475 -0.285822627276147 0 -1.84187874629501 0.825519337437383 1.10778345006625 0 -0.251219830331985 -0.101262989360562 0 1.21193378821424 1.15192124553151 0.492044403234218 0 -0.126142869377967 -1.56552154779935 0 1.58147459557738 0 1.21365530184477 -0.747731038880446 -0.524119229724777 0 0.587852709947391 -1.63025614611880 -0.68360292755622 -0.35183187631267 2.81751227421592 0.0449494334567409 -0.0591493918737036 -0.194012530228323 0 1.85849075785261 -0.125911886031461 0.5898448177530 -0.0845208043152887 -2.9581233224024 0
Rv1886c 0.556273754515614 -0.0931439128654754 -0.166401079449331 -0.969057563489165 0.805004173314313 1.67482787404054 -0.166401079449331 0.519693971898641 0.64070196367455 -0.166401079449331 1.36620577754834 -0.166401079449331 -0.450758217208228 -0.166401079449331 0.338524125018574 -0.970223257495332 -0.166401079449331 1.13225140910722 -0.166401079449331 1.48602391828753 1.02217137368112 0.787063188953066 -0.166401079449331 -0.549571081213669 -1.09809625502065 -0.9059682334934 -0.329062524905034 -0.0530128164139618 1.21471260090853 0.442518690771292 -1.8951792980972 -0.166401079449331 1.88726176651048 0.745826984631931 0.0133668130588666 0.926167443747476 -1.05611680262955 -0.166401079449331
Rv1939 -0.227657891415544 -0.271531490459402 1.18926233868264 -0.513116373462441 -0.476855696725093 1.16058658931759 0.00849853518961835 0.496210822311992 -0.125560519667719 1.08028195084322 1.07731751914839 0.783457773201248 -0.419384926286121 0.0503990005249767 -1.20509528976637 -0.845744508464409 1.07227378373355 -0.683150615965572 -0.423501260209061 1.83991863125225 0.120445992886999 0.178415726077445 -0.951748703617478 1.28088845173854 -0.288281304798714 -0.725909138288397 0.0419833099482772 -0.653803745684708 0.690543691344755 0.213260734075287 0.094134533077347 -0.68781155037203 0.668794494971 -0.186595215212325 1.01209214013667 -0.0957114259548726 -0.189280149709209 0.673458700542468
Rv2302 1.86521845104588 0.229241497987770 0 -1.43650254701621 2.27456929715720 0 0 0.477622462265123 0.137652291021928 0 0.140388883098606 0 -1.52478632902824 0 0.212605092537196 -0.808781438612384 0 0 0 0 0.245136911039421 -0.00836093737949918 0 -1.15283177874514 -1.21396187769191 -2.97982036149044 -0.898782404782788 0.79461290987591 1.3383689675966 -0.244207624986695 -0.288036083309783 0 0 -0.190183450663006 0.230864973592814 0.540833212794676 -2.15153428526377 0
Rv2471 -0.39199363656392 -0.731532350018593 1.12746987289314 -0.870469143452427 -0.387639000477961 0.980991882945374 1.33034189759416 -0.176610286317952 -0.353655969919955 1.54221073589096 0.326699666422604 -0.195646119660446 -0.0981212149328146 0.259575584895884 -0.891489666406801 -0.818522091204844 0.482475641784629 0.0792277551663732 1.18532548693118 0.243230695980608 0.142959937575708 0.497448366943843 -0.172055555618841 1.05986481464067 -0.375967143998153 -0.464292319388314 -0.339509047233024 -0.0525485738338266 -0.255161691098509 0 0.112931781250307 0.471900838818455 0.907495535308601 -0.312503515276315 -0.0746286617540109 -0.297270526997725 -0.700651438700712 0.512316824780539
Rv2493 1.08990321806689 -0.143314436670956 -0.292995193355621 -0.638887665520858 1.42082846602609 2.35389076642727 1.08857205618779 0.730757373574073 -0.189663120791035 1.74801362994856 0.523064926732031 0.532018515764173 -1.44200401244804 0.639974921069943 -2.06615621053987 -1.18743076453681 0.546296791538555 0.593398602809608 1.16398550326574 0.346288600940515 -0.230637973410002 -0.581834515211166 1.25722079257316 -0.908077840344991 -0.899828978996085 -1.04582537719285 -0.734590167905269 2.78391403833363 -0.0695180307682293 1.26292638061604 0.131974834684612 1.20212967739702 0 -0.695406933718227 0.446013201604118 -0.885345048632253 -1.51009644902793 0.845251377256336
Rv3115 0.0170262060752557 0.211511308420835 0 -0.394797270900687 0.018588285150044 1.55811758462558 0 -0.0230522265867129 0.104952275196469 0 1.54387327498784 0 -0.553256852949474 0 -0.6871534073985 -0.330590604014402 0 1.47792627971208 0 1.92910704323167 -0.621763866451691 0.0282697864036680 0 0.133043344914111 -0.381042231791449 0.308341638506813 -0.364138416729987 0.111451863432928 -0.227487815060287 0.0248069141962743 -0.221840505110423 0 2.33410842565260 -0.350787942990262 -0.116638773299355 -0.334064373399589 -0.20929932372411 0
Rv3137 0.126917946705958 0.46436877271518 0 -0.694966554511154 -0.306680740709179 1.9528285544881 0 0.668804695396937 0.152984717417021 0 2.28550026366273 0 -0.0831038309310383 0 -0.56805832934799 -1.00619809773420 0 1.72697486158660 0 1.71078441770299 0.102723738448389 0.155397868017598 0 0.251252163020044 -0.364184101136331 -0.385095629461666 -0.38058067851031 -0.00496876888150105 0.0120309239715606 0.89112648063401 0.0739384441464526 0 2.38513015760020 -0.015438422675946 0.517177477583295 -0.498426774546542 -0.796458188863888 0
Rv3337 0.409367191698483 -0.305233703509304 -0.309504202661592 -0.42249425547864 0.603962456027877 1.36996176226703 0 0.843606788268268 -0.0532072022858944 0.686485982383822 -0.0294475115759209 1.97719820839387 -0.985154637228098 1.15579340310991 -0.705613776262832 -0.456010287043759 -0.557973044059886 0.0386571480255904 -1.72546495416477 2.05830253879736 0.0127483973164838 -0.0996863120975796 -0.481609065364662 0.719368862005766 -0.513465754345631 0.228186416260505 -0.456819200680641 0.315511197875643 0.122557079436020 0.94668328521155 0.312249693108229 1.21226986615019 0.174015946181158 -0.429619536915311 0.924205914610385 -0.254500640343863 -0.440403189731204 0.187436022100147
Rv3416 -0.370508854911097 -0.0542321210598846 1.08528702963987 -1.88276842718952 1.33010176968542 0.0256514835319117 1.04585578896631 0.477643942512152 -0.421145840263203 0.887443929417446 2.00459307297213 0.303771139400236 0.240693874629936 1.38739856575629 0 -1.78439338820220 -0.115883924909878 -0.144290753300260 1.29288908513990 2.87671141732169 -0.494142581217902 -0.588318614771355 -0.777169400032181 0.0833393469631538 -1.69442554180990 -0.474230297880478 -0.551477367245243 1.70778817724031 -0.139455147681954 0.642181073732494 -0.0240766426271465 0.289891796028850 0.0508458450137542 -0.478767156326698 0.577708824978032 -0.415772336429088 -2.52559690547208 0.299941592595471
Rv3614c -0.594930682153701 0.105917084186326 0.113975626983521 -0.24524098995016 -0.462192233275796 2.21743814748747 1.03957794633643 0.13395206644046 0.00391078697356955 2.51089093535894 -0.309243856260991 1.44976669657408 -0.767396940889235 2.83802426770339 0.089302130853114 -0.305148055352796 2.15480552076519 0.788648720074091 0.60941675198325 2.20363954833584 -0.60944627483661 -0.254795595740973 0.86392175573235 -0.638572104688445 -0.344634368159383 -1.42337525117960 -0.403253887811861 -0.473526931698328 0.568413875460606 -0.835168884477505 0.535631758786832 0.813151386063492 0.728325496860163 -0.418777776865879 -0.215340862050891 -0.640503976072592 -0.709234311852096 1.31014741303173
Rv3615c 0.177135798491523 0.190752306340133 -0.0710261559181413 -0.173069320128272 -0.328892297084374 2.29360779211208 0.130551170319020 0.270621213014364 0.0698170278299063 2.12599060285397 0.113154804802047 1.29143418996288 -1.64940235555889 1.62099033978367 -0.231231563101404 -0.473245054903832 2.2701268657113 0.723703434028237 0.437365598004059 2.16328449861266 -0.350379857867077 0.0514384659535606 0.972902409943382 -0.657283057369204 -0.623432234650108 -1.38780208429107 -0.582132590947121 -0.155777759614790 0.626515014392108 -0.235008957356784 0.828388433233553 0.776692433142408 0.384387647185928 -0.324659071358789 -0.135337150585087 -0.445119205191612 -0.883750145033923 1.11744237479539
Rv3633 1.11140886841756 0.243579938041485 -1.15616247302349 0.149524302038062 -0.15359464122395 0.604965825386482 0.122564460831131 0.0371572989721230 -0.0500734173075469 -0.0289412582568568 -0.00807712868317113 0.788351067340716 -0.76315993762039 2.5865238535105 0.0457397878289876 -0.188297033501001 -0.241581651910463 0.508021097264974 1.11781403517709 -0.481887775536651 -0.323228591824372 -0.173954551671347 0.658404086084852 -0.449810992693165 -0.344551238249858 0.30117626349228 -0.143201067599005 0.428188658097834 -0.181952651308920 0.8608117702603 0.0796428226724715 -1.52398441420674 0.127010531065353 -0.452434405994236 -0.440012052130133 -0.443095376100551 -0.333605182775161 0.361158325651472
Rv3653 0.843672297073494 -0.182087953628793 0 -0.60129429447652 -0.357152277899157 2.17464011698088 0 0.126538739760691 -0.828744708817696 0 1.91737475999149 0 0.34250173697233 0 -0.493854707811349 -0.327894615245775 0 1.95723682111206 0 0 -0.709506751852949 0.0285505740382758 0 0.171302527743109 0.512015621069383 -1.56133569491960 -1.51364492146386 0.644125103104888 0.0216528570317418 0.586733707588381 -0.748309871545895 0 1.93862908477339 -0.727276862140413 0.920873277760058 -0.567689220158563 -0.342631436983150 0
Rv3750c 0.565854609032368 0.159186303214883 -1.19759866349034 -0.791072894907857 1.04019750066045 1.46748152398665 0.646775049024358 0.345752733124371 -0.0744782999822295 0.362268779735326 0.310273481191724 0.628193136120167 -1.11639794501166 2.47868120009494 -0.228966811878735 -0.527183385936847 0.668726673360723 1.40110239856453 -0.00887719367737882 1.03012270861081 0.382911462319721 0.561467309486407 0.773485834995729 -1.68961195757129 -0.684478637859808 -2.26880720839276 -1.55252583909097 0.424242736933176 -0.309757330514477 -0.70253995170653 0.212500034484308 0.25039484730123 0.945733677022165 0.249453784714676 0.165524538081551 0 -0.852631103530843 0.446619926108996
Rv3864 0.704199511263417 0.153297514608751 -1.56063535094236 0.807777955239699 0.614022631531577 1.43100873513056 -0.0168651365502556 0.462937440700153 -0.652769776629512 0.652139380962201 1.36512448300014 1.08914034474507 -0.861791576756933 0.256078711343737 -0.499857885347129 -0.0728528044439511 0.168105305700691 0.507310266147285 1.90219672841468 -1.36317490865071 -0.0166229631110426 0.411195343766293 -0.432940285125817 -0.997904374372552 -0.501288444209593 -0.845090800491512 -0.40533314947404 0.835112551032788 1.21998470338698 1.03255249833447 0.141711639618084 0.38868946226237 0.46123697559447 -0.575650001364362 -0.401310114392739 -0.230647105222957 -0.991327721628933 0.0951917788319131
[+] Show/hide bicluster #132 motif PSSM #1. bicluster 132 motif PSSM #1 Mycobacterium tuberculosis H37Rv 10x4
POSITION A C G T
1 0.8125 0.1875 0 0
2 0.0625 0.5 0.3125 0.125
3 0.3125 0.3125 0.375 0
4 0.875 0.125 0 0
5 0 1 0 0
6 0.1875 0 0 0.8125
7 0.1875 0.1875 0.4375 0.1875
8 0 0.25 0 0.75
9 0.0625 0 0 0.9375
10 0 0 1 0 [+] Show/hide bicluster #132 motif PSSM #2. bicluster 132 motif PSSM #2 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 0 0 0 1
2 0.142857 0.142857 0.571429 0.142857
3 0 0.857143 0 0.142857
4 0.285714 0.285714 0 0.428571
5 0.285714 0 0.571429 0.142857
6 0.285714 0 0.285714 0.428571
7 0.142857 0 0.714286 0.142857
8 0 1 0 0
9 1 0 0 0
10 0.571429 0 0.428571 0
11 1 0 0 0
12 0 0 0.857143 0.142857
13 0.571429 0.142857 0.285714 0
14 0.142857 0 0.571429 0.285714
15 0 0 0.714286 0.285714
16 0 0.714286 0.142857 0.142857
17 1 0 0 0
18 0.142857 0.285714 0.571429 0
19 0.428571 0 0 0.571429 |