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[+] Show/hide bicluster #130 rows and columns.
bicluster 130
Mycobacterium tuberculosis H37Rv
15x37
[+] Show/hide bicluster #130 rows (genes).
bicluster 130 genes
Mycobacterium tuberculosis H37Rv
15
[+] Show/hide bicluster #130 rows (short gene names).
bicluster 130 short names
Mycobacterium tuberculosis H37Rv
15
short_name
[+] Show/hide bicluster #130 rows (long gene names).
bicluster 130 long names
Mycobacterium tuberculosis H37Rv
15
long_name
[+] Show/hide bicluster #130 rows (NCBI RefSeq gene IDs).
bicluster 130 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
26
[+] Show/hide bicluster #130 gene upstream sequences.
bicluster 130 upstream sequences
Mycobacterium tuberculosis H37Rv
14
upstream
[+] Show/hide bicluster #130 columns (arrays; conditions).
bicluster 130 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #130 ratios.
bicluster 130 ratios
Mycobacterium tuberculosis H37Rv
15x37
GENES Amp Antimycin ARP4 BZA CCCP Clotrimazole DCCD DIPED DNP DTT Eta GSNO GSNO_CPZ GSNO_KCN GSNO_menadione H2O2 KCN Levo menadione methoxatin Nigericin Novobiocin Palmitate pH5_2 pH5_6 PZA Rif TLM TRC TRZ UV Valinomycin Verapamil X_109 X_124196 X_241 ZnSO4
ORFD0052 0.581505364621857 0.870941501238648 -1.04337272557393 -1.15662773531808 -2.13636790943721 0 -2.20741368274665 0.166965704949101 -2.15687564495088 0.178008108639031 0.900095006585791 0.422768285630223 -0.412606175329493 -0.477463088048371 -0.909292678438352 -0.748559703771725 -1.85401314987075 -0.728378365649036 -0.825786448870807 0.473671434556372 0.362010493898585 -1.78770255753262 0.138596332433345 1.45124544933796 1.23878290205758 -1.08695447893361 -1.23809563531276 0.278008720723209 -1.0610980761582 -0.317287984432215 0.159578577978857 -1.53594282009006 0.307961232007142 -0.0987357797118315 0.457828769169549 -0.507623308718385 0.673702535071172
Rv0692 0.477772647432053 1.21230098435599 -0.771133256629135 -1.42497835145038 -1.76982246860251 0.149087610041127 -2.31789132651060 -0.28622966255725 -2.09047880983094 0.0180688683951368 0.745936487354275 0.463004474384764 -0.507227096066028 -0.399598654154379 -1.03360337542753 -0.507600267798687 -1.63663595412320 -0.744760165957535 -0.944027516265852 0.490638618518178 0.266278159290045 -1.60464596992020 -0.125015808685333 1.69463473433348 1.33378222362872 -0.943713235627268 -1.43519020068159 0.246775550513364 -1.14966964674576 -0.877753253341139 0.0788946706685812 -1.27762503091427 0.448923295138393 -0.169636768012081 0.597069089181564 -0.437473028756311 0.771730753499376
Rv0693 0.607881419237374 1.30938550733978 -1.33551626760933 -0.468503956513538 -2.25193053350762 0.26860444650091 -1.60049410480687 0.174819109730917 -2.04711420156183 -0.455653592425754 0.892471064067486 0.106474323260828 -0.607842211063878 -0.259638599237034 -1.65328787058861 -0.264726585611925 -1.31954920277212 -0.922388204379366 -1.73401717383354 0.671083228731969 -0.359970871871506 -1.93149914032001 -0.416052687323858 1.44363683522392 0.84067377664608 -0.415946618973844 -0.313048951962750 0.291639113214827 -0.85592735565681 -1.32858428328915 0.421267092438764 -1.87042525418363 0.367567213881183 0.195122041344986 0.390472339330654 -0.214737052211750 0.416244148698476
Rv0694 0.379144944468608 1.77479478872825 -0.54477363758319 -0.321407480042238 -2.89112076918241 0.192603797263783 -1.88082894078101 0.806647694790296 -2.67166539888734 0.30331071798444 -0.0498538456275122 0.30135315033128 0.279017493409215 0.189799302385336 -0.869243070043585 -0.0438790828578039 -1.48622119070762 -0.361624626395601 -0.192909329875561 0.575051980190843 -0.451388753112408 -1.67971912271006 0 1.38579245961410 0.935590535010138 -0.234342673395920 -0.0269072282049521 0.0330627891800191 -0.830455353437411 -0.996202618724935 0.345167311051185 -1.50429509952400 0.405003257250124 0.385625256790617 1.11711989111626 0.0689487365307448 0.609340512763594
Rv0696 0.5546312574136 0.56943686746912 -1.18104229408105 0.263034179159147 -1.77805759537694 0.841588758689201 -2.2505810362442 0.398737668520836 -2.26002794483413 -0.972130740902172 0.033796859936926 0.816639159629253 -0.353991192164273 -1.35976559262555 -1.10824439685150 0.104569035318785 -0.951937467521944 0.320088123852323 -0.720723310333088 1.03143034703138 0.850833215910411 -1.05646898771065 2.02388257588463 0.576447649682159 0.67922946412624 0.499236978462334 -0.236553619379127 -0.407764925880896 -0.929405575247995 -0.708721554178356 0.582924829963052 -1.62464946737432 0.761643563914219 -0.0424539404317325 -0.198339250900327 -0.0911059401466328 0.984407908108556
Rv1196 0.526009656348867 0.691752904265874 -0.807945714838464 -0.0889592571528012 -2.70909023456318 0.00820312999304498 -3.76582848187055 0.487662202229265 -3.34845708876032 -1.31380408809948 0.348089709540547 0.165066054811931 -0.413767056738524 -1.83148772618644 -1.27403843538484 -0.33094168820476 -2.49265298084181 -0.309166005347244 -0.958069523040971 0.0451736222317840 -0.120050154210029 -1.25725516862933 0.426764674307134 0.0516619529518548 0.322791082211135 0 -0.547531132687225 -0.978753283452422 -1.22224940777945 -0.560781171097642 0.127782461708427 -2.13326994908593 0.235041726535837 0.170542696440924 0.937305234412223 -0.0236449734777446 0.465775373884382
Rv1215c -0.00141501947697575 0.0971837281810967 -2.25199259504247 -0.861719696447634 -1.80351993954998 0.333619434579133 -1.16221595011636 0.291137693616558 -1.60009908280148 0.0611844418419367 -0.136191519552035 0.359892516454433 -0.129154189473887 0.239310090965120 -0.383194462736292 -1.14626899354673 -0.871088552557467 -0.347215422399315 0.110746493451389 0.391878470893379 1.62081068912323 -1.23780847553160 0.513584476723058 0.0474227952088758 0.259794753802738 -0.433973392128562 -0.272306245113151 0.334500740024332 -1.18828368985001 -1.45877703415489 0.20945818182122 -2.36142392104459 -0.00412220227814649 0.119479361787895 0.422924890931388 -0.361976638431213 0.807301954387634
Rv1368 0.237500283796956 0.305012868071501 -1.071862969207 0.118012602958181 -2.47896493129088 0.4922364929979 -2.52249213133437 0.46269376078183 -2.24397769973388 -0.23259123277456 -0.362774773505201 0.370191065020987 -0.418087040386935 -1.06343711608126 -0.95347629240263 0.0109901295359952 -2.46772686932183 -0.295298219113505 -1.08546267815960 -0.00391505403566517 0.024289891765456 -2.65091737569632 1.36679082835291 0.352611862556735 0.0886137893242678 -0.0385107295540318 0.112008126083907 -0.191069732331429 -1.24590020620183 -1.31633770133191 -0.0256068131264816 -1.74389909326276 0.280860077343354 -0.204075037644696 0.00917201447171509 -0.255137378579542 0.229717076857072
Rv1728c 0.940419629807671 0.322351080041730 -1.94410772858646 -0.257692912743779 -2.21838326678085 0.921128969844348 -2.12045630359902 0.781081881128943 -2.02106406137025 -0.471480816086454 -0.0175225803185097 0.483766233095047 0.382911445484524 0 -0.922137844347612 -0.388417695266735 -1.2712950855944 -0.457900261842316 -0.988859306641343 0.511018361311109 1.02044674962156 -1.63134702538596 0.234082403983194 -0.538555774178851 0.119643093730947 0.257571033332918 -1.70814778512232 -0.193594065204728 -0.408948342522847 -0.813120385334894 0.175785788297614 -1.48898641156123 0.492138909293737 0.185189325863259 0.662065306793844 0.41357450416552 1.56619070557038
Rv2220 0.351990237793715 0.990079512189273 -0.407791960028692 -0.505175458172782 -2.09968295585494 0.135778203402338 -2.37174644968090 0.043790849160969 -2.04138207294411 0.399574672406659 0.278726737859293 0.983512476924013 -1.60461208359425 -1.03970136633764 -0.0398317739850435 -0.187418875951107 -2.32844057858166 0 -0.234565904743128 0.829398861035619 0.628288128381869 -2.17606411131149 0.618701930712478 0.677051479714098 1.03189463177018 -0.49693772965556 -0.753664531367349 0.362674210572472 -1.65235060778567 -1.69456615150673 0.881729417492423 -1.74904565130388 0.161625794393149 -0.235207088448632 0.307284276237263 -0.631795543575328 1.19791139811322
Rv3232c 1.0441072258244 0.667157468642137 0.518623996121721 -0.50156198911483 -1.49451178335762 0.400008121322467 -2.25334085772386 0.773732301014919 -2.36071031864668 -1.24503748683181 -0.262642586759523 0.816623654184746 0.340769603933479 -0.991323311732227 0.119942434665679 -0.0786639866088139 -1.5983850284209 -0.561304961466906 -0.573410050173328 1.05860230303901 0.563810499520123 -2.39263025758218 1.10575020745808 0.00534116225029313 1.36185030549201 -0.765092845293568 -0.338329345549179 -0.235333821449970 -0.713709248177767 -0.77830922532937 0.45505931127743 -2.2168836776677 1.54903981176277 0.467208577120845 0.453871328339285 -0.0323613977419663 1.57895687880062
Rv3291c 0.373500746031440 0.349200401183864 -1.51108005420305 -0.183730166385873 -2.07579925628816 0.179654803337507 -1.97291421058423 0.213747957867916 -1.83360110831408 -0.992255758801349 0.449990591275318 0.627480719476262 -0.152101981831054 -1.46273548144605 -0.831343015097892 0.133483902390953 -2.33713929973298 0.00577007932948066 -1.47627051995584 0.572818316237032 -0.134193494959012 -2.36035415654867 0.77884056129983 0.58522709761568 0.481813497583858 -0.376221342523017 0.0461339775131929 0.317238119415928 -0.317088327473724 -1.46563397411543 0.332237200412689 -3.18533020023314 -0.208235952964638 -0.0329179213423381 0.488145472597487 -0.449637245779774 -0.391816226593471
Rv3318 0.391969926408093 0.224130655164001 -1.59885521618960 -0.995520611848545 -1.37624704311253 0.462931414878289 -1.77193092295415 0.515753822037327 -1.96962823256714 -0.324053667777466 0.996884521870926 0.479456852813192 0.583690082765450 -0.124971709771082 0.463676320010999 -0.872567557882464 -2.15501685026812 -0.719837382261174 -0.179750202136038 0.241545522905704 0.207667968733875 -1.33835047537245 -0.156571866186460 -0.0699736839176244 0.424224979149992 -0.882081192289721 0.260944637683211 0.524717732110679 -1.23622275999516 -0.695172130537294 -0.296714313614531 -2.94973288972182 0.167306450839523 0.0897823135250539 0.251639746941577 0.267905046282464 0.917208778246614
Rv3319 0.149628773921432 0.566285295592362 -0.447323992518557 -0.192149325698240 -1.87107279352719 0.662578219310293 -1.67563908031099 0.07224267626528 -1.98322724259837 -0.934231114601396 0.395522532857257 0.330860540549377 0.350839164086334 -0.205610719118595 0.383108274540059 0 -1.61209902930521 -0.308188942164081 0.279674464933867 0.410591462381585 0.457832178684722 -1.00287687547848 -0.666584216597862 0.123314445438079 0.262087090381600 0.0241252424114323 -0.146573491412769 0.396628468897877 -0.702092508834879 -1.10407012824910 -0.209981691422806 -1.82394881507328 0.258420204641809 0.408273164580975 0.172111351797856 0.467948480321267 1.06881861119157
Rv3487c 0.466810086589956 0.339941041003084 -1.6925085980961 -1.09913003375040 -2.88215109225043 0.181516340096673 -3.09665128047436 0 -2.62818530212696 -0.746784796052587 0.895009950910926 0.234614236593865 0.205425369581778 -1.03580431944564 -0.795057790180527 -0.585607948574289 -1.54878518003739 -0.162652200603690 -1.28347220505088 0.1656012722478 0.54407709619618 -0.604466651110814 0.363207685593815 0.431920293292892 0.512882704479692 -0.80716673488027 -0.99603124585689 0.269484580245470 -1.78405651609134 -1.25692086027635 -0.0923689626039282 -3.04149250004131 0.484369321335485 0.391745595084637 -0.0304119482563999 0.330681638103246 0.742768385258124
[+] Show/hide bicluster #130 motif PSSM #1. bicluster 130 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 1 0 0 0
2 0 1 0 0
3 0.142857 0.428571 0.285714 0.142857
4 0.714286 0.285714 0 0
5 0 0.857143 0.142857 0
6 0 0 0.714286 0.285714
7 0.857143 0 0 0.142857
8 0.714286 0 0.142857 0.142857
9 0.857143 0.142857 0 0
10 0.857143 0.142857 0 0
11 0.857143 0.142857 0 0 [+] Show/hide bicluster #130 motif PSSM #2. bicluster 130 motif PSSM #2 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0.125 0 0.875 0
2 0 1 0 0
3 0 0.375 0 0.625
4 0 0.5 0.375 0.125
5 0 0.125 0.75 0.125
6 0 0.5 0 0.5
7 0.125 0.375 0.25 0.25
8 0.875 0 0 0.125
9 0.125 0.625 0.25 0
10 0 0.75 0.125 0.125
11 0 0.625 0.375 0
12 0.625 0 0.25 0.125
13 0.625 0.25 0.125 0
14 0.625 0.125 0.125 0.125
15 0.125 0.625 0.25 0
16 0.25 0.375 0.375 0
17 0 1 0 0
18 0 0 0.375 0.625
19 0.125 0 0.5 0.375
20 0 0 0.75 0.25
21 0.125 0 0 0.875
22 0 0.5 0 0.5
23 0 0.125 0.75 0.125
24 0.75 0.25 0 0 |