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[+] Show/hide bicluster #129 rows and columns.
bicluster 129
Mycobacterium tuberculosis H37Rv
24x38
[+] Show/hide bicluster #129 rows (genes).
bicluster 129 genes
Mycobacterium tuberculosis H37Rv
24
[+] Show/hide bicluster #129 rows (short gene names).
bicluster 129 short names
Mycobacterium tuberculosis H37Rv
24
short_name
[+] Show/hide bicluster #129 rows (long gene names).
bicluster 129 long names
Mycobacterium tuberculosis H37Rv
24
long_name
[+] Show/hide bicluster #129 rows (NCBI RefSeq gene IDs).
bicluster 129 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
42
[+] Show/hide bicluster #129 gene upstream sequences.
bicluster 129 upstream sequences
Mycobacterium tuberculosis H37Rv
21
upstream
[+] Show/hide bicluster #129 columns (arrays; conditions).
bicluster 129 arrays
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #129 ratios.
bicluster 129 ratios
Mycobacterium tuberculosis H37Rv
24x38
GENES Amikacin Amp Antimycin BZA Cap CCCP Cephalexin Clotrimazole DCCD Deferoxamine DIPED DNP DTNB DTT Econazole EMB GSNO H2O2 mercaptoethanol methoxatin Min_med__succinate_ Nam NaN3 Nigericin PA_1 PA_21 pH5_6 Rox starvation Succinate Tet TLM TRC TRZ UV Valinomycin X_111891 ZnSO4
ORF00122 -0.0457495595603293 0.476153748743072 0.32755823540965 -0.298379465087898 -0.422932925636921 -1.33356712835515 0.119343160344109 0.251270153866045 -1.15202517769361 0.260955150412843 0.700324041162467 -0.773556463948132 -0.121844853709009 0.398074987722618 0.274078091651615 0.0184805466292517 0.886567360849742 -1.87379959755067 0.294167567881441 -0.038969087291074 0.0263737697842746 -0.168861787785606 1.45589196894177 -0.585078801096738 0.83980029922373 0.50999527633064 -0.0301764882900601 -0.668285608926912 -0.485152467153112 -0.366924290561208 0.82213087569819 0.295611469215388 -1.349650788862 -1.73807941905673 0.401964891129569 -2.49438572400450 0.599584192435475 0.738709715060292
ORF03865 -0.174581521189164 0.997618793731408 0.51784011508622 0.0977773993511996 0.249438306032404 -1.48003382067157 0.839694509441627 0.329916634522513 -3.91242375387218 0.481482881299511 -0.0678984027103221 -1.03981141926338 -0.0233984888447385 -0.7194652956968 0.347370168256007 -0.274028535576717 0.598129670782778 -0.233908234548755 0.125544389569772 -0.672329179566462 -1.35709710600294 0.406044143265750 0.979740357526904 -0.347146098041832 1.26649071477765 0.517772065001197 0.152965695123691 0.285500192491328 -1.24636479320773 -0.331732027223768 0.547491753438914 0.467598619531542 -0.78299691588086 -1.09556633864364 0.536137786113232 -2.83335488189471 0.598887345016216 0.463808591759172
ORF04157 -0.482192151506628 1.25619006386063 0.100613695649679 -0.565170915940992 -1.03669548852857 -0.714362246761685 -0.142968573506198 0.398026571064173 -1.42834183903537 0.684882378640479 0.642346467586676 -0.78899442119428 0.121258597952491 -0.768131590134403 0.482138189762542 0.768084158665849 0.607528991015111 -0.39132330452406 -0.159182049386583 -0.126784699774531 -0.114901306801616 -0.337669623120939 -0.0350707492163097 1.14810892580201 -0.0074482226583765 0.267471860284926 -0.0238467119682476 0.528272048503344 -1.71945621013589 -0.16837568117364 -1.01258492162230 0.255813464183974 -0.705260725764498 -0.448796078363524 1.24569539422430 -2.79429047690582 0.551407365750783 0.126848461901685
Rv0009 -0.0320632093703133 0.610166449631425 0.485049821500228 -0.052494253975691 -0.197594948741046 -1.20178503127664 0.186288313031457 0 -3.32937532414850 0.293930542385427 0.559669038463908 -1.86464734680004 0.483135025126081 -0.345062233228413 0.214328058203860 0.514596064565612 0.740233355767129 -0.695107894720279 0.77484404900607 0.68180997284563 0.156185445091994 -0.113827532682310 0.0652336389884752 0.71466254420293 0.182822055070698 0.353729584528009 0.135666968734546 -0.273502732397378 -0.737387317404398 0.377038061102009 -1.59294247227896 0.639863214334954 -1.31276998522047 -2.40077182045867 0.830765295520729 -1.93380617678391 0.630464495726853 0.5395147969217
Rv0642c -1.17399682359086 0.987125830147324 0.657030195901777 -1.19237019099441 -0.718674424237115 -1.78899347227055 0.801336436393477 0.487744414861804 -3.11571438575275 1.01582853241241 0.667955593816912 -2.00686223259011 0.968921459239603 -0.13586114537176 0.561760272466425 0.596558612862695 1.15170048714616 -0.657281199101413 0.585023424787508 0.961011745460797 -0.428820259262754 -0.630703649196664 0.0917703084015033 0.103480327309536 0.855329670679481 0.578699853565595 0.531535265543183 -1.30949952181058 -1.01858789275628 1.1942446776597 -0.821882126167347 0.822387134399245 -1.48471678473943 -1.95436425075996 0.805792762900109 -1.56976271966888 1.10459332213150 1.00540449007711
Rv0831c 0.0919400270775998 -0.0854183297960172 0.539264851651679 -0.127042943667875 -0.0534781585610341 -1.28245217029517 0.169748209719643 0.352315526952998 -3.90144564511601 0.486741284718287 -0.761146446901303 -2.20038816877786 0.863347986572671 0.153092788574355 0.59424326996036 -0.307923680445252 0.995236772911082 -0.439149924345973 0.84780960791027 0.821873455245812 -2.08993038238189 -0.130050139093622 0.384421841108120 0.414754946279452 0.961380670706164 1.13149147312610 0.219702657690731 -1.92038552443950 -0.279263161025423 0.795485462837123 -1.81536014332765 0.330258176665743 -0.848706749679649 -1.29990189002443 -0.155086441474467 -2.99929824572611 0.720264542345683 0.861489226895452
Rv1175c -0.422463527806723 -0.0104172738770624 0.740019711056688 -0.116802621591288 -0.433456491371863 -2.69992953679508 0.509315842384548 0.292676600323034 -2.22379926305522 0.45016891694998 0.95221299543448 -1.53073337606226 0.591200314092004 -1.18338154498153 0.343151824400434 0.653213959098246 0.525044753624239 0.262904994348586 0.0819663234518171 0.778222214783506 -0.662088881374565 0 0.46781697223114 0.463694786874927 0.667362169544526 0.989660060596457 -0.007074486688532 -1.52842701484615 0.0122583474498674 0.25803675209201 -1.19505172048045 0.254792338867622 -0.712606113136155 -1.80685760414893 0.0128252229032368 -1.94904551733703 -0.148449288512868 1.14045285671003
Rv1281c -1.87291026246567 0.0616945421919837 1.02779116912425 -0.347171833329048 -0.942085403653985 -1.97049243555412 0.231658317790238 1.43597312801508 -2.00083886835878 0.766796798221866 -0.331736669178296 -1.50870343126053 0.64918995162239 -0.951194760808656 1.18869546890824 0.250825701843718 0.695458392543046 -0.612602895550824 0.462708571756723 0.97235110369441 0.364957419399731 -0.123817201884642 0.277768196191459 0.513433156405895 1.11668709063727 0.996085403816043 0.113987227470533 -1.10908726149624 -0.199282378702946 1.00313212393469 -0.189611270955570 0.340733541537529 -0.458326113332668 -1.07866009592734 -1.02379559434805 -1.81658015671315 1.06400792053436 -0.170416944421944
Rv1303 -0.510880113360462 0.70407573246278 0.0185509195844130 0.972898203043293 -0.062928059644569 -2.12813335412126 0 0.216574394824738 -0.0214572511666655 -0.0489079406349591 0.294577563936099 -1.50769853909677 -0.131383396740545 0.686154717747753 0.522515815440441 -0.0427821840194418 0.357035629973713 -0.912506368669393 -0.0846361485481234 0.0559649230144882 -1.57419927658968 0.0524152308317689 1.26859250566084 0.0800898550329541 0.221757971145175 0.35339051398975 -0.186686053949063 0.0511494895032093 -1.52534740512582 0.471659514911045 -0.226030698627691 0.682775853900949 -1.54036518394672 -1.99716758890915 0.869564219013608 -3.16273909524349 0.65568625675772 0.94180571439975
Rv1681 -0.323196008920086 0.154944909834165 0.0647651049469789 -1.58636373886165 -0.659530378427549 -1.91441453929202 -0.344987145777119 0.279258409043693 -1.72948294250904 0.094139329456341 0.145578718845775 -0.210673306876881 -0.202268702327835 -0.62690810157576 0.304317854820141 0.304294348022036 0.103051832482257 -0.370356780490556 0.533776071772655 0.075725855590193 -0.217857257972314 -0.763822962249684 -0.151045598109088 0.525732011078153 0.264575416135710 0.191641917781688 1.50656661839255 -0.98495875734629 -0.0782656330300984 -0.414573294007172 0.479144780108477 0.141342903441412 -0.852053895177119 -1.85221409978009 -0.238395668217274 -1.37529442075352 0.0726351142436359 -1.13064487454730
Rv2258c -0.811090187378956 0.534667858524767 0.475044512857053 -0.0617886918059116 -0.202273966703792 -2.36105620112941 0.370773798814857 0.00637269086119898 -1.17782956638536 0.359685678004627 0.270812461735059 -1.86146458274345 0.128271479242276 -1.48601998344227 -0.120026978051219 0.523886567785951 0.229783851690037 0.424295756306263 -0.162547710382316 0.206081048129738 -1.16035641962322 -0.100059789750546 -0.645145868799188 0.87080368183362 0.393989575342328 0.306729839020849 0.290620136765491 -0.131860516643538 -0.355380706751175 0.183085749331183 -0.298478830437817 2.21646904910534 -0.898724275928741 -1.78330315522568 0.807669028617141 -2.36606977270278 0.336747224142426 1.31986201872135
Rv2259 -0.483608449828955 -0.82921872685684 1.07397267959771 -0.790697600802318 -0.689575152939583 -1.94193210203364 -0.538987093367298 1.17813349592925 -3.37529212219704 0.0860985886938003 -0.331233758362748 -1.97354826977017 0.587933313291826 -0.0418769103314338 1.67479750895857 -0.0423570140935408 0.437186353636733 0.130019813112492 0.178288988938528 0.70015178282515 -0.498049044791779 -0.677253834035087 1.07779227867648 -0.140950955434173 0.568564028334374 0.767004332749586 -0.426601700148698 -2.4579164384429 -0.100620619545210 0.254805126905250 -1.12792665018739 0.133955939364290 -0.683073383430794 -1.25887267356598 -0.370641652917452 -2.43761658828154 0.170782660390080 1.02227780319094
Rv2405 -0.418883958223403 0.386339836402332 -0.0461317534809578 0 -0.843650863070601 -1.77576167136141 -0.0777973105404144 0.084298786436592 -3.21580897787868 0.154417080729348 -0.157173151358931 -1.32688631470473 -0.137073045838501 -1.30736363724402 0.689022554542052 -0.703898137961374 0.188577549425767 -0.625767629070376 -0.515776749235672 0.0541085622613972 -0.717575565142873 -0.0188165504271610 2.16749913299095 0.200449268446685 0.451806628534904 0.0295800942645384 0.1909697263553 -0.92672072576831 -1.08207722139388 0.407348919153784 -0.302332254943483 -0.275190811251713 -0.505872582417019 0.243209702060035 -0.0592243771064792 -2.34142478382653 0.366399452750517 0.702828473404695
Rv2427c -0.486813077216542 0.418821852303966 0.493109375047682 -0.596296140508108 -0.482957928708752 -2.01998999823447 -0.179727112165412 0.840493342299137 -4.27241668843336 -0.0614278869049361 0.353632379639542 -2.05919271484842 0.121246582950214 -0.490420289204401 1.06628367434188 0.361429076602563 0.600111565012858 -0.733106509285528 0.289978795794408 0.761566914851417 -0.299211300379936 -0.800552517894692 1.34333914188447 0.71978704132598 0.492824094989313 0.382999513163163 0.480314092029606 -1.19783954427533 0.128708752923066 -0.0498624948992059 -1.15114077781171 0.339481985036391 -1.13184118781263 -0.785883337209536 -0.353517767333301 -2.39161966000213 0.278896731223506 1.25781953285266
Rv2733c 0.493958355859155 0.280276981666735 1.52973447793890 -0.716277287553118 -0.0251780352378913 -1.78679356153120 0.202209264850789 1.05138190581039 -2.69119401677161 1.86233991574770 -0.032245225517027 -1.76785758165198 0.155564430797752 0.302846733278482 0.94840207308709 -0.0504174328529039 0.258774936701144 -0.702244902937284 -0.396220917659317 0.353370537074219 -0.393565102992917 -0.564057894514878 0.344533024503234 0.541413530310772 1.51134206831429 0.127234266636276 -0.38871580889026 0.565011842589109 -1.0281776817526 0.419971789882949 -0.0251780352378913 2.25116047421934 0.965769272858773 -0.766076704511125 0.202029279817399 -2.11884055429809 1.58290480059541 0.454617995925193
Rv2882c -0.366086236935409 0.841570019805337 0.735219652317459 1.27085687174360 -0.137822472953612 -1.61764888235862 0.1409197754155 0.140141987748397 -1.14720866440654 0.930170027692433 1.10242482092306 -1.45525071867427 -0.503182823097299 -0.235613569813261 0.249944061125721 0.655535359509662 -0.287487303392407 0.512598293231476 -0.466057171875286 -0.591126605783909 0.749097776330824 1.17254559119453 0.279817947928302 0.243141734551808 0.877196330950712 1.2164206614029 1.64071750787672 -0.174194266293509 -0.441116563751705 -0.0626694652476416 -0.521813771974997 1.36835932345732 -0.64695594675244 -1.79946387176981 0.656473219669728 -2.72241028355637 0.697654818308817 0.299958037212528
Rv2928 -0.795444791263445 1.08954799137296 0.60094031902399 -0.0596864220433646 0.237347266938410 -0.946037259513542 0.692130944450076 0.353978549466359 -1.39499473352972 0.982644287339552 1.20149487404178 -0.764994835671455 0.841135494283326 -1.46992505324286 0.285319816043161 0.53233079692326 0.986833821657409 -0.114339666394657 -0.100441343270606 0.696222543704296 -0.819705367754822 -0.225891767873683 -0.344559617302279 1.66656199114989 0.588791022476676 0.581496988030663 0.705101832678403 -0.241929820030037 -1.34348130640431 1.15369911184464 -0.580142740187392 0.390237526532794 -0.191375099324291 -1.97027754336263 0.812929454144469 -2.61207213720747 0.797777800224137 1.25060476117686
Rv3215 -1.78659396786907 0.0168944470407595 0.935543347026107 -0.98541492940083 -1.60713702048945 -1.88346950057059 0.473872076500184 1.06229290689542 -3.08872313382344 0.638054794354494 0.384690708333846 -1.01314411829549 1.01869748826047 -0.901595082168914 1.13406906203265 0.235215584729278 1.12975784089908 -0.258989563230931 0.329017682185979 0.883537885772102 -0.216394667559659 -0.730156942717552 1.47107278505609 0.797240657737664 1.10429389159099 1.24490620180135 0.680687280793446 -2.28907048095410 -0.704135279305005 1.31261692699081 -0.466769072567855 0.6765581525847 -0.668450056935843 -0.867104698008411 -0.100750514531435 -1.85130052230545 0.88178910235851 1.88469381758415
Rv3224 -0.206390238392055 0.579062392279226 0.6529792620563 -0.229117848142569 0.348794199124769 -1.47106088470497 0.504905803498753 0.0188240494808823 -2.97383722304488 0.676442748420993 0.297527442944268 -1.81242178533089 0.258645309720971 -1.0087423687319 -0.0188877442128596 0.466143588257757 0.609573063649528 0 0.400428097691373 0.325639096176972 -0.713638557240808 0.0228314011221336 0.0714924242739236 0.329888067441173 0.716234193008856 0.809179818934067 0.837245988294114 0.133062108035678 -1.09254527776523 0.241395956871345 -1.36790524985669 0.646594889170914 -0.852801194374995 -2.19057144522802 1.11328416343051 -2.99432447252978 0.725033938716868 0.290145127833842
Rv3280 -0.427503624314844 0.883847172546941 0.159810794207219 -1.56117693850160 -0.450837146993327 -1.34571005548535 0.869203254242298 0.403749356472871 -2.61579343242978 0.724565431281962 0.793632676666892 -2.20354433661560 0.849408646375195 -0.485084384217901 0.450812097537813 0.575901156579263 1.20796429722660 -1.68239675996196 0.827007930178174 0.98802222721097 0.292348974970889 -1.61871200981496 0.885064600494897 1.02834675119455 0.879206395716968 0.349836591786125 -0.0294351583778527 -1.05231778079954 -0.290811663327431 0.724310459023814 -0.196620781560887 0.903164299880216 -2.04356920231714 -0.845352896317738 0.276467095106352 -2.57070859016804 0.77205542810582 0.743727955811713
Rv3464 -1.91284609254756 0.826351947148575 0.622648258927229 -0.34815581983897 -0.674862380484916 -1.69105446180354 -0.0260970571386174 0.939132132815752 -3.07972227486148 0.418197717993889 0.365034444547299 -2.01787754336288 0.358673823366757 -1.20376586194953 0.588139992513252 0.482319597294209 0.469584697101897 -0.24021421630473 -0.352349570352318 0.516709377038281 0.00621141524936846 0.068618012170048 1.51066856397337 0.749742900867521 0.829358406344219 0.60129810838849 0.193113191157341 -1.09222862913731 -0.305088276463874 0.360070378096769 -1.34632231488176 0.573555985915622 -0.9904259105627 -1.73951290140835 0.405236187793629 -2.29518480878722 0.632857887047193 1.82470540958122
Rv3592 -1.29720454256831 0.821448515853578 0.220990348137000 -1.28768664201318 0.117843588544171 -1.52477659355904 0.33277908247981 -0.344352033012835 -3.31761715376556 0.110832721145822 -0.178994987784293 -2.33206311440461 0.58722484762708 -0.593228378366796 0 0.453825085734447 0.603989862248568 -1.43466934514677 0.547757205277506 0.481890533343466 -1.40501932434905 -0.656840443083135 0.246079886140996 0.139489655939986 0.380047343483412 0.0223929541348377 -0.473861357864838 -0.66029981744582 -0.89988165108179 -0.22557756307275 -0.53343403424688 0.0825279117729083 -1.93735394547111 -1.15644449964260 0.474824526285839 -3.3055915834345 0.306486191258434 0.515010102686082
Rv3725 -0.373030454547728 0 0.52328851102215 -0.0614094053353774 -1.45728337386968 -2.14281483961109 0.214038797098732 0.628085228636499 -3.96804087493536 0.519362798253687 0.512823076837461 -1.55638445087558 0.74175526166893 -0.205368276816175 0.646921168060142 0.567527308553541 0.461593475296043 -0.319696200381825 0.477910678093421 0.922165064086816 -0.210310304751696 0.0268796329563303 0.228536388007491 -0.236301615906144 0.634663735614061 0.730010069378593 0.858038778961404 -1.45014376077761 0.191526644308194 0.769457556557749 -1.52279394805394 0.206988345673375 -1.03802224966087 -1.24251712271812 -0.258750362794251 -2.45245722991396 0.496793919315038 0.77149382272175
Rv3914 -0.699614769895766 0.489016171089659 0.266509441746394 -1.21756029696084 -0.370326091909294 -0.519401443080757 0.08922948770364 0.154714028258066 -2.1108989507376 0.312498893835554 0.0764297982115367 -1.15496021489325 -0.0146865998135917 -0.616707278224869 0.310568755579013 0.177697253317659 0.165884595986624 -0.215801450831848 0.785341804924288 0.174130450404456 -1.09668851357753 -0.887277270757555 -0.456489985980669 0.201171372063631 0 0.616832164309542 0.727727982633586 -0.72579778381367 -0.414057756779876 -0.413402642748233 -0.405625381480809 0.280646864984583 -0.972878329560648 -0.0815484253016926 0.0597882005275335 -2.01391697438938 0.159059846857446 0.0741462902780055
[+] Show/hide bicluster #129 motif PSSM #1. bicluster 129 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0.75 0 0.25
2 0.125 0.25 0.625 0
3 0.75 0.25 0 0
4 0 0 0 1
5 0 0 1 0
6 0 0.875 0 0.125
7 0.625 0.375 0 0
8 0 0.375 0.625 0
9 0.75 0.125 0 0.125
10 0 0.25 0.625 0.125
11 0 1 0 0
12 0.25 0 0.625 0.125
13 0.25 0.625 0.125 0
14 0.375 0.625 0 0
15 0.125 0 0.625 0.25
16 0 1 0 0
17 0 0 1 0
18 0.75 0 0 0.25
19 0.375 0 0 0.625
20 0 0.5 0.5 0
21 0.875 0 0.125 0
22 0.25 0 0.75 0
23 0 0.125 0.875 0
24 0.625 0.125 0.125 0.125 [+] Show/hide bicluster #129 motif PSSM #2. bicluster 129 motif PSSM #2 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0.875 0 0 0.125
2 0 0.75 0 0.25
3 0 0.125 0.75 0.125
4 0.625 0 0 0.375
5 0.125 0.125 0.25 0.5
6 0 0 0.875 0.125
7 0 1 0 0
8 0.75 0.125 0 0.125
9 0 0 1 0
10 0.375 0.25 0.125 0.25
11 0.375 0 0.625 0
12 0 0.75 0.125 0.125
13 0.125 0 0.875 0
14 0.75 0.25 0 0
15 0.875 0 0 0.125
16 0 0.375 0.5 0.125
17 0 0.875 0 0.125
18 0 0 1 0
19 0.75 0.25 0 0
20 0.25 0.25 0 0.5
21 0 0.125 0.875 0 |