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[+] Show/hide bicluster #127 rows and columns.
bicluster 127
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #127 rows (genes).
bicluster 127 genes
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #127 rows (short gene names).
bicluster 127 short names
Mycobacterium tuberculosis H37Rv
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short_name
[+] Show/hide bicluster #127 rows (long gene names).
bicluster 127 long names
Mycobacterium tuberculosis H37Rv
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long_name
[+] Show/hide bicluster #127 rows (NCBI RefSeq gene IDs).
bicluster 127 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #127 gene upstream sequences.
bicluster 127 upstream sequences
Mycobacterium tuberculosis H37Rv
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upstream
[+] Show/hide bicluster #127 columns (arrays; conditions).
bicluster 127 arrays
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #127 ratios.
bicluster 127 ratios
Mycobacterium tuberculosis H37Rv
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GENES ARP4 Ascididemin_Natural_product Cap Clofazimine Clotrimazole DCCD DIPED Dipyridyl DTNB Econazole GSNO_CFZ GSNO_KCN KCN Levo mercaptoethanol Min_med__succinate_ NaN3 Nigericin Novobiocin NRP_1 Oflox PA_1 pH4_8 pH5_2 pH5_6 Procept_6776 Procept_6778 PZA Rifp Valinomycin X_109 X_111891 X_111895 X_241 X_59
ORF00385 1.76080152184458 0.419348415894391 -0.856147346476677 2.66981570811524 0.692689730685189 1.34066776498955 -0.760124724390175 -0.76726952503259 -0.541942369359021 1.17205018473787 -0.237783145742564 1.22402220580577 0.939545316085803 -0.457033466760714 -0.459928584098916 1.19595698229167 0.739581995673466 0.288063898105509 1.82363896043333 1.03738057210804 -0.795433809624628 0.174543469819069 -0.761101882878244 -0.503621305670984 -0.511574221667861 0.62993803572323 0.47037787914538 -0.343485051770805 -1.72998689224155 -0.718865176947678 -0.287855652737807 0.121914296614513 0.674233491786141 0.202570671800518 0.37443562294185
ORF06120 -0.231701978469467 -0.174786514254426 -0.662674333710616 0.480272845826373 -0.185514048890238 3.28865006023794 -0.243869422017076 -0.471868457795933 -0.940761854053493 0.213351193192673 0.421337290266414 0.97590431882998 0.781956599182783 -0.437090716863588 -0.355980346567344 -0.699200793559627 0.828271418181608 -0.613519554930672 0.666869996300517 -0.260425785766002 0.334278019701758 0.261070908783171 0.469613057886194 0.919749551583395 0.52215390791907 -0.136000381253621 -0.214562827382300 -0.104124447137053 -0.238655218769883 -1.59895838460714 -0.0876188892180506 -0.691053955791930 -0.0079026868973596 1.08497580056389 0.297334810963322
ORF08400 1.43236500751397 0.403802302036817 -2.27802367920484 1.19837974456094 -0.325078426230844 2.30204886350239 -0.715964194104324 0.538003825750067 -0.0551273849668682 -0.0594896877480011 0.421794598166386 0.911937473740567 1.30174696589017 -0.327530039264319 0.300153883119884 0.776274294734625 0.732264966190675 -0.202598975092896 0.378673128966893 0.467596294886666 -0.124384035433857 0.391348721223163 -0.255942880017504 -0.292815522159444 -0.284118960003532 0.148670003671269 0.213647437042231 -0.875997929407082 0.224299309188261 -2.02929530336896 0.502367360756929 -0.507798871523 0.320587993951291 0.817166525599818 0.397044425057636
Rv0038 -0.534205728200482 0.263956472744216 -0.0744947024614081 0.934540138531167 0.185659566722224 2.14115012851289 -0.112208761778789 -0.281617773582651 -0.796090793712693 -0.101634373979331 0.0148403997702321 1.24013465707010 2.59414646831979 -0.173459952491592 -0.577154885702822 -0.541361103201403 0.684650248696278 -0.676131086570708 1.01359823031376 0.511180373100422 0.324834209362332 0.665115276772417 -0.297157401469057 0.210178995717006 0.161894619916078 1.81497006376047 0.355270090019989 -0.281670620288578 -0.159351819787545 -0.796577740108013 0.142558148530105 -0.193171319362573 0.358727135947128 0.591464320159254 0.0131605065428470
Rv0423c 0.681171529815286 0.795191713664454 -1.91368059758155 1.39486024344193 0.474873527134461 0.788531850237973 0.466048962774966 0.150489524514166 -0.186478952148466 0.472303811889339 0.724935054861268 0.33645444355213 0.203693851314476 -0.784353294116455 -0.456558882313541 0.0164624613448546 1.10938963618357 0.847426383036386 0.244326737166258 0.386687429461568 -0.215432506590766 0.442635598969604 0.189805272623692 -0.181358607048543 0.224616968800144 -1.11039892479316 -0.312870927589502 -0.45960928726632 0.376922882517287 -0.99841311300455 -0.0211581345627781 -0.0368098825270008 0.845707193095742 0.152819566751686 -0.31277259946026
Rv0530 0.131961611260347 0.442076602297445 -0.990694789668435 0.261437742193096 -0.339299207773034 0.899102709214157 0.435875268907501 -0.429403714184858 -0.0878478566421683 -0.0634093556010981 1.07003494441792 -0.428770245931064 0.64921988100922 -0.857775566242118 -0.50504534278485 -0.91976042021691 -0.490182400355478 -0.14557395416092 -0.425404530216883 -0.754877872035129 -1.10447407587021 -0.732609169076373 -0.321532220775674 0.0320065248892606 0.206594524034945 0 0.0343246069984276 0.233007148644808 -0.413612285976683 -1.74984255890456 0.412863868836336 -0.243568558917042 0.171290105568468 1.10329796427975 1.21547402711589
Rv0937c 0.926173758958754 0.0231366974822408 -0.933060999929725 1.51730053449173 0.65202677853838 1.82720995524996 -0.172103642834306 -0.418638461977585 -0.222553361722769 1.17180372484874 0.421916273354587 1.45853516002877 1.23288319683468 -0.388847840308561 0.0537436435160862 0.0370780694170359 0.617750945835176 0.427559334474788 0.257335133866469 -0.740683560811698 -0.253250829713922 0.00315556299316211 -0.0276871724834314 0.197178488903360 0.401506359145099 -0.066114408520124 0.0534144979576802 -0.691276231386464 0.288217301740109 -1.32905215561020 -0.841770745914338 -0.306689411992583 0.567008550692077 0.0419856869303356 -0.447892041969218
Rv0981 0.78020889271526 0.152149519724983 0 1.88602504639892 0.839329897537552 2.52647150450870 -0.132579583124635 0.148341221129023 -0.148224693371479 0.848505474423702 2.01888114846598 1.30731422295859 1.69870019868337 -0.265210971695167 0.0944565166980124 -0.338300056742482 0.856959558891751 0.744536324274082 1.39206882338929 1.17673177712387 -0.253294623601870 0.0768828026560460 -0.81185652582225 -0.536132477960898 -0.722213088569907 0.652825436733277 0.133290920714218 -0.968801787915983 -0.36308522873959 0.396572346524046 -0.260188719673032 -0.647374499166465 -0.0602387377689441 0.243139057588628 -0.567623222119475
Rv1126c -0.185329697129027 0 -1.33140034398593 1.23780423465259 0.74291214825848 1.54804140668919 -0.416476068971136 -0.61878927568595 -0.0494059766840648 1.19797358938210 0.0238876759208307 0.880280046998476 1.16511371615812 -1.35360536630865 0.0843871744725734 -0.114613134382345 1.00737646056680 0.449529741847261 0.708269553353605 -0.502933690226794 -0.565896527090725 0.391303070746567 -0.161756201279554 -0.155499439505484 -0.361534951371968 1.40609285912089 0.515507776358569 -0.377715461499245 0.0575734070343558 -0.475265513146091 -0.148088039220822 -0.368795413999002 0.0317328355277034 0.369338036816982 0.0701795911918431
Rv1223 1.99596343677434 0.515639664375093 -1.36437812751496 1.53038484066925 0.716475800287355 2.85272764538764 -0.260802539051557 -0.406641865003987 -0.455320730536202 0.892482880048944 1.52174118042695 0.678440877115597 2.92657299033265 -0.257148173386744 -0.893675304131934 0.657126442291675 0.51001283701944 0.413056355162271 1.76245751932071 -0.32765066369565 -0.208128489480109 -0.0252307396290756 -0.227228673220630 0 -0.260793026239319 0.217909203693364 0.0515749894520086 -1.05523622874545 -0.553210992815032 -0.759372571910715 0.266829836958732 -0.325023954661061 0.567280917538667 0.478802627789162 0.374361115680485
Rv1487 1.87484510948865 0.108936721893028 -1.84168636117611 1.14072460348620 0.0675523039806594 0.915133726272899 -0.473937989960945 0.32107703237384 -1.35197313408267 0.220811464358812 0.105192433149763 0.120262558536707 0.673156379734238 -0.151065002181232 -0.100290418226681 -0.0770207324520406 -0.122076676654674 0.256535638071375 1.63473784639802 -0.629738081659078 0.273733979624158 -1.04216424503174 -0.482160249976806 0.353499614013675 -0.173502402114102 0.67169599309955 0.585387219106359 -0.93869874923269 -0.573289807028486 -1.91195841341833 0.304060939918333 -1.10296064585163 -0.0483260662793169 0.710441750406723 0.341745782414221
Rv1565c -0.100207659908320 0 -1.58022696568482 0.262989696550952 0.289666419930828 0.0245994968754265 0.193688666216448 -0.169429623850233 0.159763008976904 0.215603381978634 0.672380920720858 1.30415559098979 1.61314018581991 -0.288331764466194 0.0294123379380385 -1.25488623192732 0.271373771866802 0.144264059632676 1.16712447475743 -0.933253920534327 -0.600627287959194 0.231831628160552 -1.15008415934971 -0.845791015726648 -0.456700013292628 0.873569265913055 -0.0876577716855361 -0.167032701934561 -0.349380292819591 -0.308714765217899 -0.111993918641647 -0.0457169419876564 -0.0200780453715374 0.0634822197095415 0.264056340605635
Rv1797 0.56268357136257 0.717647434578845 -1.42637100288357 1.25447629260968 0.652441606220197 1.32810011649055 -1.79135403012063 0.620760383653067 0.400344774029888 0.616489748816671 0.393019279881147 0.636725440908198 2.71494063769117 -0.624216281262369 0.170055207893631 1.25281468944866 -0.262773267334780 -0.000944433335141105 -0.673770127227509 -0.636998139382365 -1.62227616469467 0.200095548784360 -0.99064020136209 -0.565187984608839 -0.859119957042323 1.11925317196288 0.872340808162157 -1.40456867243079 0.438031981275055 -0.88708505732998 0.0308227365676154 0.00210896445272418 0.658534183858752 -0.400990149421841 0.92104263620133
Rv1810 1.14498265703182 1.11125133934025 -1.02874416429944 1.98277505639269 -0.0192292010096927 2.11034158087472 -1.05144367743292 0.409597193618372 -1.65242463595253 -0.056079976721993 -0.197982906623998 1.73033526403786 1.2256955777369 -1.66766258742459 -1.58811852733517 -0.197982906623998 -0.197982906623998 -1.51028311564511 1.02558199585260 1.02000484256784 -0.951109798016633 0.663153305259813 0.616805639180151 0.885044769208894 0.72036088575912 -0.127361714192191 -0.596709993779968 -1.51918055115971 -0.818699737415846 0.0213275610277917 0.0873543406147213 -0.519595546948152 0.497631141810985 0.379692423136901 0.301011887848263
Rv1845c 1.25968024421546 0.404225599300899 -0.758083146041797 1.43193999792065 0.511245636850216 1.79698138325993 -0.786614174898256 -0.0209546250951266 -0.750592886000863 0.504961478315194 0.227277436407798 1.36770304653401 3.47780768785684 0.0312015071826041 -0.653902449460513 -0.498160546878119 1.22980306499866 -0.416032695093543 0.56608349270019 -0.326450028212199 0.406326370440335 -0.0746511938543382 -0.355802496555885 0.072420606101897 -0.39380766888301 2.07837188408561 0.910885329495538 -0.373953564146993 -0.237530731210874 -0.793156862956844 -0.545795938209602 -0.245095242067381 0.270839707116158 0.558207595958897 -0.420883315327708
Rv1862 1.81219702933033 0.421706631932148 -0.323254263372675 1.29128883352917 -0.0767889498993198 1.36880699049716 0.680467729609811 -0.344928939736966 -0.558354039420074 -0.0216028481259117 0.613595134245646 0.703483833517223 1.14827483594241 -0.536753769241097 -0.101725448316404 0.710362164386925 0.82163340891834 -0.127942180216952 -0.435165396137929 0.673471944501828 -0.669622265521637 -0.376642450867433 -0.436118649587003 1.14878815442153 0.356993755011655 1.35715684914667 0.712778699722889 -0.313793852350150 0.327672044861422 -1.57157695840605 -0.293709313409952 0.223600564455926 0.335817816315301 0.394651102466583 -0.190928823482255
Rv2093c -1.00562192770096 0.186989596992555 0.289214555263027 0.97464458299463 0.141648868992108 -0.483348299091769 -0.607001541126053 -0.1427912249776 -0.0588980135068887 0.640202380179441 -0.140260434931037 0.168391386470041 1.53355979035956 0.145910128262528 -0.204943616452487 1.18745245831657 0 -0.381933113535422 1.18583463748228 0.162201034754633 -0.0250401721215501 0.118231530071517 -0.578251687309975 -0.164963352449675 -0.380594777654367 0.633195648649639 0.309607132368337 -0.580001614953858 -0.497811879959561 1.35646367550449 0.564034963679842 -0.268138441837305 0.266320704033002 0.38995039522586 0.0215695341982001
Rv2345 0.654656738471295 0.469655383634253 -1.38509357990801 1.45215544926284 0.381655637999879 0.974117171549136 -0.243219064207681 -0.259490983776812 -0.410176702649476 0.4664385545409 0.717782072889161 1.38381514761037 2.18272687506728 -0.70110231791334 0 -1.09846976967938 1.28294709289832 0.095723557619555 0.414659102768097 -0.0696397432252037 -0.319049817624816 0.318900882335315 -0.59684153213178 -0.681374074900794 -0.714367006566833 0.751109790211932 0.0216003053408655 -0.256750919583720 -0.82917395386571 -1.57487770558674 -0.506059179530398 -0.478144207678917 0.277770669651085 0.180541767939951 0.0918011897702584
Rv2444c 0.636412699705273 0.98991519331794 -1.04151529056492 1.45575207244377 0 1.93194832445205 -0.330405653999477 0.327350856197922 0.131126187788347 0.325633536797419 1.36348009174416 1.72242367271565 2.24190372039948 -0.465188406875334 0.682925615501761 1.19216592239981 0.488689097224232 -0.129843929514294 -0.0598805477180889 1.11818540857067 -1.01120343077329 -0.0216422038008377 -0.317497108049872 0.155307447909482 -0.0189798103708637 1.82747975496031 0.817847699746806 0.0907223053136459 -0.81409371861068 0.255395700199264 -0.358339274246091 0.128031669829772 0.992123726430746 0.170089940445439 0.889260380539352
Rv2447c 1.13201942221121 -0.210843594270108 -2.00419038268620 -0.195256890288165 0.489557599982799 0.0202317484722132 -1.85059919700952 0.123005415585833 0.390194628274074 0.0134328106407628 -0.353139407985994 0.751932966722487 0.477077508848156 -0.130610415190247 0.637693103345106 0.256688442203857 0.872780219181253 -0.127521272908433 1.30830085216283 0.438392199942319 -0.654108266801207 0.0988998538196286 -0.536475894199338 0.173248641971222 -0.975668650609865 1.91117603430158 1.72456277426371 -0.945267128204127 0.579362434875428 -0.487441816497527 0.353743130013980 -0.359287557542231 -0.549962133934806 0.279161435350704 1.08958821729871
Rv3095 0.971200837390736 1.02402049935466 -0.773806142086582 2.03872701370902 0.506503424035035 1.78517002154901 0 1.12697400913279 -1.14489812952176 0.930990735758644 2.42630113589640 0.788262779933908 0.632401883033057 -1.44486957849155 -1.24783889798075 1.77094958745707 -0.0753503779286387 -1.12603038651410 1.12818800483986 -0.704326323827617 -0.253671509440517 0.173646188176517 -0.986883369966347 -1.01621782531650 -1.22612063690879 1.47821612053469 1.02664165094028 -0.936385846096675 -0.852593092155269 -1.04229196931440 0.559765341289947 0.253036788504405 0.929348201372065 0.380082233350913 1.04200396139461
Rv3103c -0.249610616101281 0.999567855019077 -1.58783210861834 1.45508307609070 0.546573774250928 0.708493938594598 -0.614241216348425 0.0866002404941252 -1.35426167276607 0.833942492035515 0.119061769945568 0.585469729341622 0.0789778179381336 -0.414693742990189 -1.21277934355022 0.0474907788785392 0.249220554763109 -1.65204730923158 1.49332235853477 -0.285517729368454 -0.129570999408464 0.525022035219636 -0.689680207639715 -0.454111682289104 -0.886949291789811 0.930743421927967 0.847092310870044 -0.815603846827198 0.460305893670162 -1.81822086999938 0.170850153977560 0 1.20615620854098 0.874404530629162 0.890614539525875
Rv3139 0 -0.0188103286124515 2.59238932103894 0.894819491688717 0.0927439183661726 1.10963580016421 -0.391514247329444 0.948544019588316 -0.304965098438413 0.582363454223235 0 1.04430791412382 0.291386343282807 0.257299505541436 0.679950749772183 0 0 -0.327618744893311 0.58173292929917 -0.466405131247605 0.330318250398245 0.586463446383681 -0.918749056500329 -0.871277066449954 -0.610844978102285 1.61164018409974 -0.208901906445343 -0.974348204199022 0.240604558080784 -0.646206034662371 -0.549792004395471 -0.236477952477689 -0.381474967396574 -0.477610546484306 -0.809367868438213
Rv3140 0.303861443074357 0.641886908725307 -0.797604150365872 1.10516121595358 -0.0528140496298607 0.65912546373394 -0.0130462150596837 1.97840464923008 -1.03758395380286 0.942242462555707 0 0.425672629680901 0.776684457341807 -0.207109325330410 -1.07779988920338 1.15895828081417 0 -0.970876084895317 0.0755067822112686 -0.122009984963148 -0.227141720096917 1.64150472991025 -1.17909667446344 -0.632371505012867 -0.0763915941270304 1.92904938608094 0.0905369339444461 -1.01753865784472 -0.166694343657699 -1.08768788728253 0.208042578993092 0.324975368975775 0.0921408304000987 0.385491795294514 -0.32880986852939
Rv3299c 1.94197751127096 0.273210038625678 -0.792768379260909 0.130115390755661 -0.0746876320050297 0.982978039956037 -0.754371497004834 0.141120750886563 -0.353295904436162 0.136332504131904 -0.152643173648078 -0.833873837201788 1.07732408194055 -0.894437231586604 0.0161610351254975 0.719374408487783 0.259983575652578 0.233045567915991 1.62530610612967 0.794809852754768 -0.416520927194608 0.578725468018197 -0.00170310997513061 0.220202395437029 -0.512198265710767 0.774953642808207 1.47622273240322 -0.0232903852249262 -0.180310624577441 -2.6881931332915 1.10137267051316 -0.509225790901783 0.263329499743080 1.42482726203021 1.90150967598327
Rv3437 1.54107476430075 0.954194661513768 -1.52730270362885 1.36531316493086 -0.118856434253217 0.978268882828526 -0.653767027581567 -0.0648210735162373 -0.99630642841649 0.499976254994783 0.161592260855567 -0.0427546051909111 2.31663921835293 -0.504337203924394 -1.13960757588293 0.27143123637508 0.0447853823729292 -1.26243624089016 -0.187606109401589 -0.0833687924193841 0.120705756245323 0.185841854972618 -0.0477625718746018 0 0.282161909464002 1.05240101733595 0.628424705029096 -0.333595928626245 -0.364792074692573 -0.944685918283665 0.0823243030497595 -0.337631880570818 0.63711615265972 0.787095312689485 0.855969570034793
Rv3519 0.324791302029835 0.608537080835475 0.448621030416566 0.94930231044338 0.00371970725672766 0.496620000465783 -0.921711394308817 -0.208589317428795 -0.202950037936829 0.591363710381242 1.16982408019406 0.934113942451234 -0.368486885528139 -0.163816873681331 0.756933248281992 -0.269384995051175 0.99589746351879 -0.0472059840165701 1.29311053430528 -0.0949275650853808 0.169285163896633 0.60879489075802 -1.71265656190074 -1.39921954206444 -1.41618755430623 0.330850398997488 0.0993523543981381 -1.34880538803463 -0.917511676341952 -0.753881540455647 -0.637631846397994 -0.420806163808011 0.375677839209678 0.0532898165891312 0.0199522451885925
Rv3837c 1.9515302874345 1.19470727053544 -1.47426731450471 2.35311879157466 0.602201057699481 1.48468295500917 -0.6040020090139 0.328531834467680 -0.00896505829913243 0.937628495661705 0.00729157333343092 0.490575172471188 1.56367216461558 -0.166334476346675 -0.792852251037173 -0.686361028387772 -0.0641005937953197 0.263879671869499 0.960291845834652 -0.245681824201343 -0.0936605603535516 -0.318450774607515 -0.352912919815138 -0.528942345472103 -0.709172496221378 0.0601899574535366 0.0312267098494691 -0.364949632440198 0.110359543476558 0.743138654094679 0.226337498377125 -0.314222176802367 1.37423050370432 0.645990596757135 1.00487897562598
Rv3877 0.207758305213302 -0.0211395350814019 -1.97095180553859 0.684194270775013 -0.0206525050219717 1.46397822463654 0.324178317846894 -0.194770868734566 0.0316203640068693 0.230502932734176 0.898485869786426 0.269424705019141 0.8353125261379 -0.472376285760647 -0.288693049505397 -0.617262194938872 0.815408663768362 -0.0892176822722884 -0.144242597629803 -1.11462521896386 -0.912194830327082 0 -1.03054151323771 -0.826341043073929 -0.543090764098614 0.748475374587518 -0.00184937169692744 -1.59661821242938 0.280340653708648 -1.79249567396024 0.381191905171449 -0.0563231863392215 0.0663647407482268 0.82918710791756 0.380704687839777
Rv3905c 1.67241967146621 0.293593275013333 -0.275953171657893 0.228138111644118 -0.155824562811920 2.79016183952372 0.206336186282396 -0.341687372796166 -0.721254746159678 -0.752304149166921 0.393248457404809 0.442236210131794 0.67140267094973 0.178637181026884 -0.174929753670933 1.90341029937191 0.385028955975644 0.253121166085316 1.54473315428733 -1.11492195505620 0.582929564709346 -0.191705238749562 -1.61583609992355 -1.39082166004706 -1.64754433742791 0.452874278957369 0.478398964084823 -0.906104706567716 -0.147747875796564 -1.05288178309864 0.961889499685836 -1.11141332945908 -0.063082017047177 1.20273285089142 1.45557780468195
[+] Show/hide bicluster #127 motif PSSM #1. bicluster 127 motif PSSM #1 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 0.043478 0.391304 0 0.565217
2 0 0 1 0
3 0.043478 0 0.956522 0
4 0 0 0 1
5 0 0.782609 0.086957 0.130435
6 0.347826 0 0 0.652174
7 0 0 0.478261 0.521739
8 0 0.652174 0.347826 0 [+] Show/hide bicluster #127 motif PSSM #2. bicluster 127 motif PSSM #2 Mycobacterium tuberculosis H37Rv 20x4
POSITION A C G T
1 0 0 0 1
2 0.6 0 0.4 0
3 0.4 0.2 0.2 0.2
4 0 0 0 1
5 0 0.6 0.4 0
6 0.2 0 0.2 0.6
7 0 0 0.6 0.4
8 0 0.6 0 0.4
9 0 0 0.6 0.4
10 0 0.6 0 0.4
11 0 0 0.8 0.2
12 0.8 0 0 0.2
13 0.4 0 0.6 0
14 0.2 0.6 0 0.2
15 0 1 0 0
16 0 0 0.2 0.8
17 0 0 1 0
18 0 0 1 0
19 0 0 0 1
20 0 0 1 0 |