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[+] Show/hide bicluster #125 rows and columns.
bicluster 125
Mycobacterium tuberculosis H37Rv
17x36
[+] Show/hide bicluster #125 rows (genes).
bicluster 125 genes
Mycobacterium tuberculosis H37Rv
17
[+] Show/hide bicluster #125 rows (short gene names).
bicluster 125 short names
Mycobacterium tuberculosis H37Rv
17
short_name
[+] Show/hide bicluster #125 rows (long gene names).
bicluster 125 long names
Mycobacterium tuberculosis H37Rv
17
long_name
[+] Show/hide bicluster #125 rows (NCBI RefSeq gene IDs).
bicluster 125 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
32
[+] Show/hide bicluster #125 gene upstream sequences.
bicluster 125 upstream sequences
Mycobacterium tuberculosis H37Rv
17
upstream
[+] Show/hide bicluster #125 columns (arrays; conditions).
bicluster 125 arrays
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #125 ratios.
bicluster 125 ratios
Mycobacterium tuberculosis H37Rv
17x36
GENES Amikacin ARP4 Cap CCCP Cerulenin Clofazimine Clotrimazole CPZ DCCD Deferoxamine DNP DTT Econazole GSNO_CFZ GSNO_KCN H2O2 KCN Levo mercaptoethanol Mtm NaN3 Oflox PA_21 PA824 Palmitate pH4_8 pH5_6 Procept_6776 Procept_6778 Rox starvation Succinate TRZ UV Valinomycin X_121940
Rv0875c -0.615192762223304 -0.223084581933746 -0.832439149379365 1.56279127257711 0.00428496770336623 1.28791086811855 0.163967960067410 0.728783500692427 1.83413999454849 0.250217324184737 2.12360863994617 -0.113129359044830 0.237260373991937 0.484608063077671 2.25371291875809 -0.521872680777247 4.11607907323018 -0.0828041995229543 -0.323700958527998 -0.61977974219079 1.62544127413380 -0.302673605436593 -0.238914489270552 3.23849918368048 -0.288087945386557 0.103569567155166 0.129513830812806 2.96808049616515 0.758932795756723 -0.918022220907783 -0.911381659069484 0.28570599965043 0.338968010574128 -0.480518405307182 -1.77041418435046 -0.66110791493894
Rv1100 -1.52728175201841 0.188937062579383 -1.49342179578666 0.384132927253049 -0.0503547733927709 1.03476355444709 0.452332484149008 1.47239897734276 1.76714137923245 -0.880890010861814 0.738892699807698 0.759112727552913 0.245577102864487 0.349474879808592 1.24686769796391 -0.305199769538676 3.78233141484457 -0.573300672202543 -0.517482345091396 -0.166291044697236 1.25120317630031 -0.270596812749448 -0.721299771519375 3.70226559673044 -0.255858306457547 -0.489117037677977 -0.364362408612255 2.39704786446809 0.833187002937863 -1.47723024893416 -0.382428386203237 -0.191351096449123 1.00972594349549 0.0396717574590361 -0.631710733125961 -0.54578656044498
Rv1333 -1.55779376362868 -0.501429259590239 -2.10400283067122 1.25955234163365 -0.144825693982919 0.99549588465629 -0.103271418214195 0.956527383824575 1.96436250342955 0.00557135550537629 1.05899065009899 0 0.171580755883649 0.425981307996916 1.40187045771426 -0.756835493419384 3.06718853880043 -0.281276924477167 -0.0391908189601988 -0.638253636116965 0.696578159972382 -0.304456028675190 0.467661030906882 2.71477963158854 -0.610184032619935 -1.14748072643495 -0.353895896858508 1.63700747757910 0.78267083993655 -2.44580290301029 -0.657608407489718 -0.111542610871399 1.55700043440774 -0.851487177796332 -1.94741107405379 -0.271720779025581
Rv1540 -1.09018963414290 1.19178709891772 -1.72909288363737 -0.0675049182939237 0.14340781932261 0.804107777453525 0.190873214525224 0.208453892655651 1.06498104213488 -0.490977248315548 1.37132114423555 0.181790339719066 0.601806498080196 0.649996557131034 1.9951402017064 -0.301776413607983 4.29209033516548 -0.297452543399146 -0.400081909470868 -0.137135755994374 0.804198552019985 -0.352929936809633 -0.099128132099433 3.60293283406065 -0.618233231004895 0.428989396077006 0.22270384873505 1.94210696927478 0.8318019920687 -1.98031255040584 0.0696619333308113 -0.596192123759932 0.0399473972998789 -0.381749428241368 -2.19333413992911 0.174713452134082
Rv2181 -1.59845505518259 0.134096661786111 -1.83554028323568 1.10802794196802 0.374462368656142 1.51115701341313 0.0099120536879823 0.701329704211949 0.819255974463414 -0.123332853218421 1.65752903198877 0.546202529995537 0.671179608621957 0.018928949390303 0.767990867597577 -0.743216946492536 3.21362351136906 -0.114659533056258 -0.385152985921601 -0.596666668177265 0.684563260330938 -0.0588574946738601 -0.81423121235814 3.05694143530291 -0.238396956175739 -1.70693965589363 -1.29744419017327 1.89298039485363 0.226929230711378 -2.00521636296386 -1.53952019977618 0.24089684281539 0.298571935320345 -0.49792938702241 -0.846744631564955 -0.639022434955006
Rv2310 -1.3233288155053 1.17472909192737 -1.77970608034721 -0.148896049430860 -0.0397342590228721 1.49229458832600 0.130512173448298 0.7166680021453 2.17485159356777 -0.427458402735845 0.491593518662157 0.042009965374776 0.250658336476653 0.7475378471281 1.85574938534784 0.0318705638499369 3.06086462622064 -0.531358830388813 -0.702432793737287 -0.0345505986474955 0.994153753711776 -0.317720031164723 -0.104379726248624 2.9411220652589 -0.535998170562777 -0.664244901917182 -0.911149242696581 1.76121429553654 0.537157524914259 -1.51806683698023 -1.41613767028542 -0.764474380835544 0.546584640580790 -0.255932270811326 0.515115170890769 -0.558595302509388
Rv2326c -0.850231438793777 1.16117666916696 -1.24698460355752 1.60092344610934 -0.259827322329006 1.63365132203547 0.114637360331614 1.30640502624938 2.0603919709805 -0.32262761121553 1.97523600978891 1.50676973318289 0.390783425611118 0.299157924907426 2.21767382947775 -1.03023642061338 3.42873249786572 0.173015647300563 0.0908095417135766 -0.436674376625778 0.885300207280643 0.173273977523365 -0.307838657473428 2.89648070228346 -0.42726790633835 -0.425713846122185 -0.65924026950556 1.28219039629936 0.330217552341921 -1.45836195562016 -0.575743622288476 -0.411541858788466 0.776550061802782 -0.346879654830079 -0.917211576057406 -0.36122353676797
Rv2365c -0.682549870787559 1.45504141643208 -0.717018394494351 2.36850581753461 -0.145728032491176 1.52002635969593 -0.183697274667911 0.60186210090479 2.35050929847337 -0.147180177087282 1.23085102055114 0.996166774012651 0.262027823574325 0.200278140304326 1.50667653432273 -0.184334798250095 4.41454435976811 -0.0811453936254757 -0.353540638279932 -0.603972608680485 0.346693212873023 -0.0974919012943662 0.323915814992274 3.69753732227867 -0.437685122844068 -0.564091438215505 -0.435681911362395 2.29117875856799 1.46867432528453 -0.317597797105939 -0.198579391886663 -1.29954277323832 0.155441505853379 0.174352073835343 -0.517873681898038 -0.053646171278284
Rv2367c -1.55406083424915 0.226527438142034 -1.18928155086493 1.87064172008804 -0.436438627589224 1.74139817721682 0.0209685002866307 0.825451680312137 3.041370958318 -0.456648335519061 0.80079123354528 1.17683418599258 0.661592176558897 0.920150324303695 1.51873677739735 -1.00054012135246 2.79117482528298 -0.330611926550721 -0.0118189187727129 -1.17961953026178 0.303717618451391 -0.317608148821083 0 2.94025947763695 -0.734555604695038 -0.949921578645064 -1.26603619790970 2.55086178345462 0.51117610630407 -1.01668477101446 -0.567316538006256 -0.73517038205456 0.221819657716914 -0.730836615617088 -0.141870955744373 -0.423425571592285
Rv2368c -1.89856484781157 0.383760998788007 -0.431230294153348 1.00900975768754 0.256196420208368 2.41336366401454 0.08707960768663 0.482584584597741 1.82521206198894 -0.122368955086316 0.258334720731486 0.81455345589654 0.772305909848567 0.66066859284674 1.83915446004578 -0.637853209609574 3.00994523653508 -0.404884207774336 -0.0351008812828613 0.0601260677591917 0.780324758173154 -0.476614441102894 -0.308711218756386 2.42241592312372 -0.847767019656422 -1.35991856701484 -1.21490332492964 1.94014922189499 0.46202112858277 -0.675635913609292 -2.46144107201444 -0.856363282459653 0.404693227875494 -0.357880873797091 0.401865485740426 -0.241334199296240
Rv2589 -0.705055546781645 0.566701118718333 -0.74303123732769 0.701370925457659 -0.360243404546573 1.00222196982707 0.519143018973092 0 2.06672809322618 -0.391178628409992 1.00349594465434 1.33344651185224 0.599247440566654 -0.561969791880959 1.23856817460995 -0.551906380025922 3.25427411214143 0.200727264034732 -0.0884878264677095 -0.736915191955123 1.23933934843769 -0.00433309153610096 -0.701696417136262 3.58814017270662 -0.208354137896054 -1.12801641549630 -0.904054477109456 1.45050876916220 0.441201457756225 -1.05211165574215 -0.089859445580851 0.199843882994273 -0.511434597159608 -0.345958793254159 0.356399766047338 0.815345517174374
Rv2678c -2.28399625857685 0.417456258343299 -2.31730440963415 0.527727209784911 -0.10684611621132 1.21910287448165 0.271604987763077 0.611447269218557 1.52592899780049 -0.135077257048524 1.05135850196799 0.637290892944116 0.131344608111322 0.189753518390743 1.69855423303644 0.142852169485581 3.56382830292662 -0.312675378406482 0.0348484208930655 -0.331422403987526 1.12746824805649 -0.461659859578466 -0.531332456124749 3.42165559423091 0.0921290681946226 -0.633100916526175 -0.211661634397217 2.01246624910839 1.22896217167152 -2.39853014137149 -0.906022962275377 0.0282512341345314 -0.165820317629932 -0.379886400251811 -1.69618836346037 -0.109137884354967
Rv3245c -0.834472141416432 0.786164882469062 -0.697457855456811 1.12608859027095 -0.247645850313752 0.917086893450853 0.205870565104872 0.372220614945125 0.828605963698447 -0.0667422131209805 1.55572305947901 -0.656200632070704 0.042105226613101 0.524202191497515 1.37501207880551 -0.739465995720659 4.54218599514536 -0.252938306263147 -0.464545559917535 -0.299127143986845 -0.266654557913684 0.13742307546763 -0.483371124146622 2.85087160596196 -0.468281845006573 -0.122440090554279 -0.00890741504225689 1.66045210416959 0.277170427691137 -0.825595555351863 -0.70658153351063 -0.214251074510829 0.241491379199105 0.106374717612137 -2.0660245568575 0.254065191495367
Rv3339c -1.18907639224705 1.62534488658169 -1.17329380975191 0.927926640224265 -0.119518176709749 0.488632664598752 -0.167654063538036 0.153369355586611 2.08229996917538 -0.110616698977799 0.684252024898302 1.20978240371051 0 -0.101634547805475 1.91915445898459 -0.120526056305474 4.13065168277712 -0.284321401242570 0.50928262601246 -0.625396673619957 -0.131972489669565 -0.265206625939953 -0.0111541657810684 3.10766606543826 -0.348704625642217 -0.579493210769973 -0.0627867568237116 2.41368667585012 1.16652083092458 -1.17221821322958 0.528930237654792 -0.773083666834418 0.482123026162027 0.213486452935532 -0.778665608706773 -0.293805826094377
Rv3433c -1.21460523785151 -0.0670447093790158 -1.54106007947334 -0.261959989087993 0.0191228206955367 1.54320028533218 0.213402240574462 0.642119376478933 1.43890850685596 -0.244094651742617 0.169597998655271 -0.110370730759956 0.197823748488713 0.639318024192897 1.71864646472825 -0.235960422247875 2.66444023059 -0.179383326663729 -0.39234488080117 -0.585221132998461 0.89475659471409 0.224408690465221 0 4.87128454034361 0.460140224266927 -0.327851133296054 -0.689391096501066 2.05889849951365 0.475038794270634 -1.11911633818412 -0.578371968321572 0.558266412028526 -0.191669729231688 -0.038729196550733 -1.45203346028399 -0.112378683487349
Rv3869 -1.68132297966876 -1.35745867041863 -1.60307060228278 0.357398185436672 -0.451577174776909 0.698547266954531 0.0949689934130989 0.954920440676197 2.03964290509147 -0.184036939756593 1.48362326193277 -0.974839180364269 0.113347271509423 0.908850896597737 1.21008387182024 -1.30344523809055 2.89427657936022 0.01275823326813 -0.184061876557183 -0.72152086514954 0.502182766386466 -0.295379614748863 0.274987221936374 2.21140225646119 -0.332824497532855 -0.873794445858152 -0.602018964605159 1.01778201056906 -0.0451221411545439 -2.10352022826614 -0.266836084866212 -0.413804443154595 0.945576198810202 -0.511164106103191 0.105380816072922 -0.337789543967506
Rv3871 -0.897725183967201 0.268189321832856 -0.958592632088351 1.28027398353548 -0.352830542107006 0.842276666368006 0.406081541464614 0.357755552049174 2.44474370926911 -0.159722578697579 2.09713240482268 0.399116955704333 0.472061114468002 0.239333760239068 1.83807803551259 -1.20766333019427 3.64155378871594 -0.163217516866950 0.290305900670162 -1.47780686496438 0.556566226149954 -0.738747485695194 -0.062467099296688 2.21500346502039 0.0917539293079873 -0.57739744722969 -0.653245892090093 1.06878571563138 0.699774562923672 -1.42309867327785 0.307613061865965 0 0.986284912111095 -1.72955897511605 -1.05293576885234 -0.392010884066851
[+] Show/hide bicluster #125 motif PSSM #1. bicluster 125 motif PSSM #1 Mycobacterium tuberculosis H37Rv 14x4
POSITION A C G T
1 0 0 1 0
2 0 1 0 0
3 0.142857 0.714286 0 0.142857
4 0 0.428571 0.571429 0
5 0 0 0.714286 0.285714
6 0.142857 0 0 0.857143
7 0 0.142857 0.857143 0
8 0 0.428571 0.142857 0.428571
9 0 0 0.428571 0.571429
10 0 0 0.857143 0.142857
11 0.142857 0 0 0.857143
12 0 0 1 0
13 0 1 0 0
14 0 0 0.285714 0.714286 [+] Show/hide bicluster #125 motif PSSM #2. bicluster 125 motif PSSM #2 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 0 0 0 1
2 0 0 1 0
3 1 0 0 0
4 1 0 0 0
5 1 0 0 0
6 0 1 0 0
7 0 0 0 1
8 0 0 0 1 |