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[+] Show/hide bicluster #124 rows and columns.
bicluster 124
Mycobacterium tuberculosis H37Rv
20x34
[+] Show/hide bicluster #124 rows (genes).
bicluster 124 genes
Mycobacterium tuberculosis H37Rv
20
[+] Show/hide bicluster #124 rows (short gene names).
bicluster 124 short names
Mycobacterium tuberculosis H37Rv
20
short_name
[+] Show/hide bicluster #124 rows (long gene names).
bicluster 124 long names
Mycobacterium tuberculosis H37Rv
20
long_name
[+] Show/hide bicluster #124 rows (NCBI RefSeq gene IDs).
bicluster 124 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
34
[+] Show/hide bicluster #124 gene upstream sequences.
bicluster 124 upstream sequences
Mycobacterium tuberculosis H37Rv
20
upstream
[+] Show/hide bicluster #124 columns (arrays; conditions).
bicluster 124 arrays
Mycobacterium tuberculosis H37Rv
34
[+] Show/hide bicluster #124 ratios.
bicluster 124 ratios
Mycobacterium tuberculosis H37Rv
20x34
GENES Amp Antimycin BZA Cephalexin CPZ Deferoxamine DNP DTT GSNO_CFZ GSNO_CPZ GSNO_menadione KCN Levo menadione Min_med__succinate_ Nam Oflox pH5_2 pH5_6 Procept_6776 PZA Rif starvation TLM TRC UV Valinomycin Verapamil X_109 X_121940 X_241 X_59 X5CL_PZA ZnSO4
Rv0050 0.395331812199087 -0.070838145075769 0.25684020618149 0.395090950602682 0.334154355066437 -0.21844502119157 0 0 0 1.15481565164233 0 0 -0.207649578012312 0 0 0.0683054427752783 0.32083238505159 -0.295797325009263 -0.000164655597824583 0.670509878485818 -0.391039606733091 0.286926015203645 -1.24128494167042 -0.168113576574952 0.971640838623537 0.544663127165291 0.774434080243682 0.261318522686909 0.292950082541955 -0.473749529703085 0.58454166551831 0.258354000628073 0.304022716500884 0
Rv0241c 0.162731193193623 0.948037893587617 -0.403748164977647 0.33369739957948 0.828551084147895 1.07758947793433 -0.837887035981148 1.03053825382908 1.16493793242843 0.77129469072354 0.0972106977968326 -0.186293587103522 0.305822191195733 -0.517535418040072 -1.09166400378244 -0.186859307304445 0.347013766028205 -0.692850492907726 -0.458455084600199 -0.478121180055169 -0.170020198332040 -0.895687263741411 -1.15673975421716 2.22778985485735 -1.07172990095358 0.478547628561149 0.435526078423823 1.07617878217562 -0.576821995170514 -0.718321045955065 -0.179968893047018 -0.0729525478458206 -0.760584116855532 0.420494891305184
Rv0247c 0.294793858484747 0.163073395213109 -0.679874167123042 0.256146849406323 0.186418737595094 0.393417167743835 -0.182887310802100 0.85119861000087 -0.182887310802100 0.385489472785809 0.479664716153656 0.163070846565693 -0.403389701660673 0.499823997017639 -0.182887310802100 -0.371426513627216 -0.366645905245169 0.368504304627138 0.653973882636988 -1.20651138145784 -0.208148661417708 -0.94778841576378 -0.882557917224234 0.519119881964238 -1.65144047731222 0 0.724324778162758 -0.182887310802100 0.000832334865755394 -0.666535355625746 -0.420265753169751 -0.215666428157330 0.683238471725931 -0.182887310802100
Rv0284 0.0531078004473177 -0.137751759976130 -0.468766212530643 0.0236968097161937 0.29290974209609 1.68521380036164 0 0.593729978730466 0 0.572651510204849 0.804309815424209 0 -0.147599306256404 1.18553629287278 0 -0.376395206667012 -0.163718815343460 -0.61130969875159 -0.46893608157238 -2.2179982880459 -0.0187567409002964 -0.187965372059693 -0.448267937321666 0.320572603217845 -0.531190218884633 0.155633302770719 0.265960059639074 0.746933568182611 0.122508586272299 0.478634699032623 0.482017997395022 0.321060421423744 0.115222382105894 0
Rv0289 0.191947357574010 -0.0803483933755445 -0.556334321174987 0.452841646348887 0.353384433810765 1.73743353595089 0 1.09213600670506 0 0.839671412252082 1.23011822926746 0 -0.976714944603853 1.37188076857332 0 -0.511758904778508 -0.540765506117769 -1.16566356369093 -0.865456014654469 -1.35403368529228 -0.0223049889111608 -0.0445807325421784 0.0998278090296535 -0.0170607036485070 -0.183564748777458 0.0850975915138329 1.04570568659374 0.711025458246953 0.358212899415577 0.235122819478718 0.825739766282815 0.994868160367244 -0.119636663158289 0
Rv0290 0.066958131260487 -0.265836889869153 0.142739509607214 0.372586519993687 0.649867801406134 1.44156941041615 0 1.58195183946058 0 1.23810751479608 1.38870916373792 0 -0.626549625519014 0.876287017417467 0 0.228965870595632 -1.14308554897403 -0.63161419308684 -0.87142712795891 -1.01069661912842 0.371757303710462 -0.370169419451416 -0.806018868925557 -0.232694980796208 -0.282834197386087 0.556186252258943 0.163201423924353 0 0.168795965905827 0.375380926617055 0.253196301440486 0.653405648342905 0.508455738963408 0
Rv0291 -0.0576293997179557 -0.655480771880943 0.533645749515114 0.374301737599292 -0.0311044853533041 0.812507932953698 0 0 0 0.224965479645684 0.693043304483835 0 -1.18080794410179 0.329842131671391 0 0.65069979605737 -0.440624343353817 0.373845496020598 0.288497514986046 -1.35614871162016 0.307862661161397 0.301425190931277 -1.24056730594971 -0.179504979019069 0.105728632621112 0.248275742847769 0.0830058815749414 0.812136714205315 0.0270491004268656 -0.148844703310303 0.147008992676968 0.186156778717783 0.61189753557221 0
Rv0292 -0.084328259683492 0.521060128371956 -0.0195103654609157 0.0261880169766455 0.214653760211427 1.64549731279736 -0.0166652878287799 0.111191198506743 0.412260328679132 0.286032096108153 0.136797475460839 0.0683067252246595 -0.515438326239777 0.757090740704023 -0.0166652878287799 -0.259863675638418 -1.29336005704112 -0.923981953083353 -0.814237430946913 -1.01597079001744 -0.114987100388954 0.209151625546539 -0.426382311960028 -0.114910359080058 -0.0220535832690689 0 -0.443168567240016 -1.23042036156604 0.359075055293795 0.464177728529064 0.579076501182752 0.553314837784974 0.879582602649426 -0.0166652878287799
Rv0315 0.625990975885725 0.233532018073063 -0.362415785130972 0.551628867068988 -0.95114105245789 0.561736393795507 0 0 0 0.46833745650749 0.590016237736348 0 0.251591107384163 0.216286008371637 0 -0.497470391065972 0.184115905006449 -1.4166498126737 -0.725992716593937 -2.93053246103857 -0.467717008952878 0.208954145012246 -1.54722697536486 0.229422457511563 -0.934325728493203 1.27184220107576 0.189701652432499 -0.0242608570862835 0.397887104354707 -0.629734245195715 0.26692944446107 -0.249947551967368 -0.642265375835721 0
Rv0934 0.351182705765964 0.408326106978347 -0.532992520721447 0.993198387021386 0.768990404197513 0.37199199805012 -0.064479750853968 1.18228754722299 0.418061239151197 1.21999822673604 1.14404562923197 -0.064479750853968 0.858325938180411 0.694712064931991 -0.064479750853968 -0.426191931667785 0.412100846382521 -0.0518717850007088 0.245686079472852 -1.46053422167671 -0.233721710554193 -1.20651275905938 -0.0301100246054386 0.344829048563943 -1.12696456800394 0.390443556672117 0.682370792313572 1.4808729955893 -0.0844586279682208 -0.588851261593317 -0.322592741329134 0.00663414616935077 -0.457682411733172 -0.064479750853968
Rv1295 0.574149913839421 -0.0867660521609918 -0.400524692893249 0.347880704241155 0.943031088402936 -0.205712839867452 -0.443959130432519 1.21151273465376 0.484104760120591 1.01870376343931 0.0577272377269759 -0.376068363086746 -0.622144473586193 -0.0741464013753857 -1.10244748152236 -0.151364627376283 0.640890172510908 -0.283557982433092 -0.253698216855781 0.099797160696146 -0.00326379916015913 0.401552861576255 0.112804584775638 0.497444225222337 -0.725635875931955 0.194980046316814 -0.452570747477636 0.167099131638260 0.524438616009284 -0.557752034745018 0.811427260058996 0.392605183508631 0.383335785535681 -0.650240798685958
Rv1309 0.362003851625333 0.364465912972026 -0.471791770689201 0.386230445161065 0.251150044807477 0.425761756055855 -0.151877627162622 0.117512274678048 -0.151877627162622 0.425669975940952 1.00684106592512 -0.151877627162622 -0.810353548571742 0.697856434672803 -0.151877627162622 -0.491203987525353 0.252009462028437 -0.157193990866678 0.14779574779646 -0.756856635643854 -0.605464701304726 0.649100035470946 -0.765388842933993 0.438284830213645 -0.57406504328203 0.0865334398014782 0.75617306837249 -1.37082098755616 0.430997528567759 -0.748895890733914 0.198096898226783 -0.143821862309227 -0.593867675907651 -0.151877627162622
Rv1310 0.596538532226347 0.454942350739618 -0.736633916920789 0.352639417529058 0.362804773126162 0.392363776851328 -0.0728520470978274 0.457553695670891 0.879117723880336 0.97865479364241 1.06124588931299 -0.0728520470978274 -0.961251467566662 0.799065403987667 -0.0728520470978274 -0.517433161182622 -0.529299515862488 0.336237635600963 0.603022243081787 -0.651891868246495 0.0337178056491711 -0.80022204708425 -0.298105704252841 0.363778004140188 -1.06999858803002 0.229345211453822 0.466279755284459 1.02762202897811 -0.0199528848645489 -0.113298548098406 -0.169280830161667 -0.0292390599990719 -0.725110382571057 -0.0728520470978274
Rv1836c 0.442429808425752 0.0292145916705558 -0.254141872099845 0.80325878305386 0.63668378320428 0.421158968202159 0 0 0 1.03558149266986 0 0 -0.0904653684450308 0 0 0.0534899866179688 -0.82176771023671 -0.561916518490536 -0.229155777821554 0.472636505675693 -0.191845784070809 -0.321732383141661 -0.256224350689493 0.498944961900448 -1.09118644758310 1.01920114754841 1.03974728054234 0 0.576936422645274 0.203700404419193 0.755183151893737 0.584260272652713 0.328842472568992 0
Rv3017c 0.363561837166617 0.378927850714596 -0.640180191356249 0.554576952061732 0.37311155814302 1.69940326223156 0 0 0 0 0 0 -1.56393908967479 0 0 -0.55683685723657 -0.542437024047168 -0.839862881029784 -0.728098390048247 -1.85600542228337 -0.103752332498637 -0.485961104304058 0.0746694452282549 0.499145304579223 -0.00332379183030576 0.152361251646523 1.13651556987164 0 0.762477129342002 0.315439713770697 1.40632259226206 0.934424716289643 -0.137539760236415 0
Rv3019c 0.0992327670763605 0.0248034311030597 -0.680641471852413 0.242672992635129 0.267073063939758 1.28767368424796 -0.183844920042651 -0.0148535826466382 0.655761250178417 0.671756901640482 1.05326850233556 0.285007761997014 -1.98710467464212 -0.0123615489297578 -0.183844920042651 -0.602465538046926 -0.740788124845934 -0.975253154066138 -0.793787043881239 -1.72055660048506 -0.293524749569324 -1.04904851780540 -0.0957908987365102 0.0898456944251091 -0.277529314331715 -0.183792853193748 0.0418852142204086 0.117949799298529 0.276633608252505 0.0407719916646167 0.948926839210436 0.477136086486684 -0.00228743745037732 -0.183844920042651
Rv3020c 0.112451462575357 0.157483407974548 -0.358809652342016 0.311672439190446 -0.139462529777955 1.36633779098282 -0.0532459542843985 -0.66687204980372 1.79739758312514 -0.161307591901393 -0.147210845607809 -0.40006869729573 -1.20593623027853 -0.896590096902298 -0.623913261539407 -0.167323645337354 -0.464521489352396 -0.483772599449954 -0.22715130610293 -1.80940823953592 0.148264421057727 -0.778604399335 0.0397327844751125 0.473879963333973 -0.288297139052603 0.331282431541137 -1.11314585732289 0.24490707798424 0.285086761082383 0.14917234140914 0.505997483705419 0.815240554553794 0.352360451964822 -1.02301825687289
Rv3151 0.483775241686071 0.397609029308562 0.370744482540014 0.269788941053535 0.365151781648861 0.397107939625088 0 0.825272263005383 0 1.14045497071200 0.672301328224294 0 -0.389297233648319 0.886713415305962 0 0.493821706639642 -0.319048714986147 0.0368532739490377 0.523121346358107 -0.120294288324052 0.285242885022883 0.474069811193908 -0.869137145989248 -0.212396824299121 -1.1848913557313 0.0969216395889635 0.72612316957742 0.178649471607510 0.912949164306002 -0.749738808773407 0.708677394501415 -0.0333817962679582 0.486354936234061 0
Rv3155 0.722662252738173 0.442298728442598 0.0999960497207776 0.459974262226114 0.292382772568638 0.734819647255364 0.201899589372154 0.793569901166528 -0.0240059352090228 0.734543439003327 0.250918536090024 -0.732150215343784 -0.271021097642888 0.893637079719272 -0.467045801594519 0.313939696663172 -0.848739978482423 0.138573162513410 0.0933982063795436 -0.824776207539394 0.343910676586502 -1.10858971731610 -1.12271047460897 0.00158489983204874 -1.27597365931691 0 -0.323149394729882 -0.65365804051665 -0.0957478372191451 -0.68483913487398 -0.268587249047697 -0.095906097456719 1.04326188637469 -0.152967538660048
Rv3157 0.685615017745932 0.456308690827544 0.190656167694061 0.584788829445957 0.62834141136896 0.468067485043257 0 1.45826114546654 0 0 1.53545825561456 0 -0.380329258852373 1.50247750298208 0 0.524630920719964 -1.21543746460692 -0.355152400372996 -0.110143619298691 -0.528364086501626 0.495890485581698 -0.263447896113775 -0.840247500428748 -0.0648966828628902 -1.20902334491037 0.360673279256928 1.52408466951919 1.88456749927448 0.0261586561735948 -0.251136206602805 0.0507102116659342 0.287787132335459 1.27667556498935 0
[+] Show/hide bicluster #124 motif PSSM #1. bicluster 124 motif PSSM #1 Mycobacterium tuberculosis H37Rv 23x4
POSITION A C G T
1 0 0 0 1
2 0 0 0 1
3 0 0 1 0
4 0 0 1 0
5 0 0 0 1
6 0 0 1 0
7 0 0 0 1
8 0 1 0 0
9 1 0 0 0
10 0 0 1 0
11 0 0 0 1
12 0 0 0 1
13 0 0 0 1
14 0 0 1 0
15 1 0 0 0
16 0 1 0 0
17 0 0 1 0
18 1 0 0 0
19 0 0 0 1
20 0 1 0 0
21 0 0 0 1
22 0 0 1 0
23 1 0 0 0 [+] Show/hide bicluster #124 motif PSSM #2. bicluster 124 motif PSSM #2 Mycobacterium tuberculosis H37Rv 20x4
POSITION A C G T
1 0 0 1 0
2 0 1 0 0
3 0 0.6 0.2 0.2
4 0 0.4 0.6 0
5 0 0 1 0
6 0.6 0.4 0 0
7 0 0.4 0 0.6
8 0 0 0.4 0.6
9 0.2 0 0 0.8
10 0 0.4 0.6 0
11 0 0 1 0
12 0.4 0 0 0.6
13 0 0.8 0.2 0
14 0 0 1 0
15 0.2 0 0.8 0
16 0.2 0 0 0.8
17 0 0 0.8 0.2
18 0.4 0 0 0.6
19 0 0 1 0
20 0 0 1 0 |