|
[+] Show/hide bicluster #123 rows and columns.
bicluster 123
Mycobacterium tuberculosis H37Rv
22x37
[+] Show/hide bicluster #123 rows (genes).
bicluster 123 genes
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #123 rows (short gene names).
bicluster 123 short names
Mycobacterium tuberculosis H37Rv
22
short_name
[+] Show/hide bicluster #123 rows (long gene names).
bicluster 123 long names
Mycobacterium tuberculosis H37Rv
22
long_name
[+] Show/hide bicluster #123 rows (NCBI RefSeq gene IDs).
bicluster 123 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #123 gene upstream sequences.
bicluster 123 upstream sequences
Mycobacterium tuberculosis H37Rv
20
upstream
[+] Show/hide bicluster #123 columns (arrays; conditions).
bicluster 123 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #123 ratios.
bicluster 123 ratios
Mycobacterium tuberculosis H37Rv
22x37
GENES Amikacin Amp BZA Cap CCCP DCCD Deferoxamine DNP DTNB Eta GSNO GSNO_KCN H2O2 KCN mercaptoethanol methoxatin Nam Nigericin Novobiocin PA824 pH5_2 pH5_6 Procept_6776 Procept_6778 Rif Rox SM Succinate Tet TRC UV Verapamil X_109 X_121940 X_241 X5CL_PZA ZnSO4
ORF02072 1.27759567834336 0.595551416810317 -1.28795692928178 1.49563891763402 -1.66504654830983 -1.63863275675822 0.278251997856533 -1.56543487459066 0.496074898036953 1.68831243668635 0.145651504849021 -1.28691264751599 -1.52724353926363 -1.67440572724260 -0.485288302682381 0.271382729438462 -0.559373218832202 0.709497487427422 -1.03183305853476 -1.67037075384067 0.322475132695048 -0.217220917119512 -1.11715975545326 -0.96168996599461 -0.84138248396222 1.84497339090779 1.39815941788501 0.183406444664317 2.99718763194695 -1.01153785477495 -0.252475171251149 0.677361491895258 -0.419462481045062 1.2362492973166 -0.194654520301661 -0.246387102582098 0.729408844500213
ORF08416 1.78504691584317 0.360454711904428 -0.217907255007425 1.92537350764290 -2.46527308580208 -2.55803152394727 -0.113659898603251 -1.97966189710072 0 0.280134028621083 -0.134195149503992 -1.74377286846721 0.0104890639164351 -2.30046229401547 -0.346056755786767 -0.316345532114333 -0.434648598670159 -0.96970664074414 0.123685658397309 -1.72301095403906 0.74410504779108 0.654439882591936 -1.64044684762696 -0.463244214968558 -1.42650920647006 2.29485597012316 0.546889414568817 0.228133793212774 1.82517983075323 -1.83846737996352 0.315583154585887 -0.044139158088971 0.0388635457808818 1.1188365404396 0.220177938461236 0.637009853465561 1.06455988002785
Rv0430 0.40026673375233 1.0454235473974 0.251242558691334 1.41857942162438 -0.721025642026284 -3.16170805346278 0.804088323639669 -1.75079035161746 0.86180423151804 0.776377241430184 0.592601370007509 -1.91673450685011 -0.55049192598562 -2.30292072815271 -0.124601249693055 0.158366046397393 0.497280395510389 0.225882144131477 1.05883405178072 -1.41903752681681 -0.132342546998309 0.303350792202372 -0.286635004347359 -0.309653653806396 -0.290588290227516 1.7817333482446 0.168537748323817 0.943508438724854 1.36272033405321 -0.403745648814818 0.121065999838335 0.356345993820549 0.414802220767461 -0.217804332460657 0.0318736791519233 0.319422136029346 0.75828562601609
Rv0714 2.05290138524264 0.626547037153312 -0.65727294968669 2.99571159411241 -1.80578083467571 -2.52915377392861 0.43339626776627 -2.12070142149908 0.296758305496644 0.144443561201993 0.308976299521394 -1.28865718671330 -0.231686616284190 -2.13501930402703 -0.0200968883551667 0.344438257079132 -0.360545638807374 0.776730613668024 -0.172557518155744 -2.00067419608646 0.178410500215912 0.203769369748234 -1.02948370154247 0 -0.751113254798628 3.14168494339202 1.18054279456064 0.235942903565105 2.14949664473931 -1.02189914309329 0.631051486797177 0.318381892738909 0.165603746389679 -0.0992446932765022 -0.163754839453701 -0.449050508873917 0.216001228936500
Rv0739 1.72415822352317 0.289017175970914 -0.284946674956889 1.54523979432156 -1.40043345653132 -1.68127960420534 0.471760801961087 -1.27828172848749 0.60183398279511 0.275511315327273 0.613501913291817 -1.75462232094732 -0.347668951788184 -2.36640989077410 0.337660445622015 0.432071824787887 -0.247257997680647 1.12138028860756 -2.01523024179998 -1.51896923192453 0.703123122469529 1.17460676930126 -1.68466434258032 -1.03434987283330 -0.127928379776988 1.58418302255549 0.325696868359893 0.83817616495926 1.90647207189028 -0.524399037082115 -0.295995011967741 0.86890079915488 -0.0790000903330541 1.03142168546995 -0.464369785999867 -0.302665322959544 1.34628387816758
Rv0740 1.49959083592353 0.200639594697966 -0.5029808234778 2.22724369274304 -1.20165451635789 -2.33756748289248 0.514833463121521 -1.78042283860520 0.337713795621666 -0.33540968031044 -0.0701466887022253 -1.44993560822296 0.359885259973054 -1.40667902678739 -0.201483796512583 0.114776044358763 -0.225465171733493 0.319557629838003 -2.81966606498907 -1.89687305905772 0.766564469589496 0.577778030307741 -0.91151570076889 -0.342720248344865 -0.468242714215090 2.48518396062971 0.00337054208244404 0.192456773637547 1.75076132809751 -0.554959220877065 0.197132913007002 0.868500432737838 -0.0616683543338156 0 -0.772511911267985 -0.710348964203364 0.304529849006327
Rv0909 2.13350830042866 0.329699351635304 0.212835856871027 1.18969069265579 -1.66624946614014 -2.41913218168489 0.723120698186011 -0.95032926962626 0.200088235327926 0.764414364525778 0.948098274326386 -1.42763128179457 -0.618726932006388 -1.80706846168643 -0.267741401179303 -0.598062263675393 0 -0.885341998257524 -2.3487805038296 -0.514823848809336 0.593881934421273 0.218180632075034 -0.731101864802839 -0.139483107245564 -0.33525735612329 1.23063830699914 0.473312428478812 1.11339195048275 2.18411502321031 -1.05407205710414 0.728271293011489 -0.335768281388960 -0.204325599006399 1.72884797305967 -0.670107569002329 1.00260320153683 0.78197897569473
Rv1041c 0.875263781544156 0.917321856606277 0.160050300774396 1.38565282742998 -0.534547182136521 0.0031254968768421 0.470767145378157 -1.92035388061765 1.24085360587338 0.0526138189641429 0.289739525614187 -0.85424278297768 -1.24348248684623 0.210611972015951 0.451340466345077 0.68106887013559 0.769988638229758 0.206578727702258 0.376604236464671 -0.990531264575147 0.208525973370088 0.268314581500982 1.26958385643034 -0.133977616590383 -1.10221458930337 1.38148772067932 0.144060237235358 0.419404916071046 -0.0448272338906921 -1.37664680175034 -0.153420753410558 0.330102135460971 -0.0205757492567492 0.989471682888059 -0.577557107638255 -0.024406723990527 0.620495674309973
Rv1221 1.43201955593468 0.941899285058113 0.0352736329152032 0.535420076731508 -0.941092413285525 -0.645607196058311 -0.514984803326685 -1.77785863195734 -0.730462060483305 0.614900220844404 -0.158773651506538 0.126075260569952 -1.65649485324617 -0.486677022366307 -0.707746528229784 -0.299886342573634 -0.857295612703624 0.399315098754394 -0.726908556014157 -0.668046989080701 0.776231399004258 0.172790275386390 0.614596732395035 -0.328091907778174 -1.58322272754232 0.823938051329241 0.410423124254282 -0.333515624246256 1.00714849297762 -0.639300714377725 -0.552923398939856 1.15801197769265 -0.180771526688228 1.48085561371260 0.455372896129717 -0.565516010537053 0.370902677122286
Rv1365c 1.67201880108837 0.219476237346278 -0.418871741425937 2.17862829662239 -0.773930836323298 -1.08227448225476 0.140937774355795 -0.227435444193499 0.324386981666276 -0.184813907309299 0.691729718025429 -1.1873587425035 -0.886700973251963 -0.331408895751905 0.281946812940937 0.170956368925715 -0.711577415263457 1.06733916147175 -0.18029667649421 0.192742981535707 0.483011807159187 0.269962720643630 -0.613424370357051 -0.662959351060956 -0.655101100061621 2.47017506210789 0.673526137002119 1.26298336335613 1.18098881334699 -0.577286313111117 -0.234432163580316 0.680299282357384 -0.229177408602155 2.42590516409054 -0.54680241986731 -0.771821523538667 1.60517959723759
Rv1535 2.13236303589867 0.214969256210497 0.186652661592473 2.11688456066232 -1.76927977779268 -2.28071752343471 -0.256979954164012 -2.02979820916860 -0.0971288615765954 -0.0435319900236864 -0.272724734928978 -1.81336190002281 0.234344336739070 -2.87776186817382 0.0159839892048712 -0.334744646592515 0.0630936021291009 -1.19659059780562 -0.268821712980756 -2.71518332588766 0.632539683606409 0.632704517077072 -1.17870317401300 -0.433780703857286 0.582866512390911 2.46690400168596 0.298218581267306 0.435698472723214 2.1216168822669 -0.81123547616836 0.152510666998643 -0.341246324305503 0.28261702578175 1.24759618559583 0.554680044082567 0.62060172297242 1.23268235871749
Rv1815 2.02378813112699 0.175658580641831 -0.0172125771990006 2.64714303023799 -0.717122555205841 -0.905476694784386 0.643603572198121 -1.17875100196453 0.67948565375042 -0.487852152996528 0.649040981635377 -1.40313814159793 -0.382613294980664 -0.837981670189488 1.09923524196814 0.617347797866112 0.397387967167379 1.95507460679664 -1.16680433442558 -1.27546957558021 0.0954782823251363 0.168186927258874 -0.94508915785059 0.236227246099197 0 2.56158384648478 0.0879972861409863 1.39223633325235 2.10741706612632 -0.70201732462727 0.127513069922142 0.600637105319255 0.160383300236752 0.503786707652619 -0.173586081639593 0.0815511675898757 -0.377783933264284
Rv1856c 1.20713516845922 0.548335371742412 0.410004626633345 1.90070095904735 -0.0245625068326222 -2.35816043703736 -0.0982377153090076 -1.21309799361484 0.366317454806575 2.51821003676624 -0.082717482236552 0 0.0814719767690395 -2.22432128931958 -0.396932789121924 -0.0187603762220518 0.444363547372284 0.291112733138746 -0.914022871916363 -2.53628460952819 0.582467162346037 0.214398451221640 -1.29341468989433 -0.502596917571991 0.318326478455538 2.73751950592880 0.920735474403134 -0.175674866915777 2.07325360327449 -0.240760825334018 -0.388959037375902 0.00174317922981739 0.221168575271813 -0.411452279668239 -0.252769444488883 0.370985992262853 0.384850247599004
Rv1876 1.44624610137219 0.405394183360086 0.491656604983943 2.75031815522507 -0.655064362667173 -0.98326815544962 -0.910942522477653 -1.86665010744349 0.544929633832732 -0.127947776587591 0.137052988112773 -1.80215789515318 -0.282746998657406 -1.38181018159193 0.664264965188727 0.224543943587495 0.805665737935504 0.229679481140944 0.526026923756195 -1.70607578129810 0.97105194447516 0.729464963554478 -0.543177708921997 -0.603664060515275 -1.04383093644871 2.282920237884 0.114328199352443 0.472763320394207 1.63581109323727 -0.461125189043745 -0.239964962954624 0.0683720675950359 -0.389321996517149 -0.310147787551483 -0.0584729270368073 0.00258276889740662 0.990247854022296
Rv1878 0.795547736009848 -0.137096350020008 0.628350803522983 3.02222489734197 -2.45546542068125 -0.0513425180995088 -0.257561277338409 -1.23897986875236 -0.0924425646286 -0.0916480221246019 0.266446656683400 -0.968062023533742 0.62928213422425 -1.74561779517506 -0.238284931270645 -0.0109120689596168 0.752611015192452 -0.112561568283549 -1.56701531477783 -0.602477802367444 0.98124488097642 0.994673696814038 -0.92330638049631 0.0188045774524441 0.263598430372222 2.91147221221425 0.157301793242630 0.173973809659012 1.74449490152449 0.600580388833051 0.499927673693187 0.238618644250230 -0.456987783618815 0.707806473348152 0.264817488107915 0.061791896686579 0.238618644250230
Rv2020c 1.9334998990827 0.327424421088127 0.257716017786137 2.32232260062590 -1.35045770662650 -2.22239155010295 0.239179699037227 -1.31329127949381 -0.499454261526902 -0.509467100438815 0.305157785726485 0.108876879968470 -0.859524305218409 -1.63214328611766 -0.0693434410736697 0.138253358214119 0.0224408488116658 0.552572904024619 -0.997110804967627 -1.31048318801429 -0.210518880269363 -0.442997472696191 -0.946632200998912 -0.816320020161306 -1.49740702552138 4.04891870021242 1.78741016536206 0.266424509744291 2.07955667714278 -0.495372838059937 -0.208677666318676 0 -0.875906843247307 1.33804725059094 -0.592057032638574 -0.00313335161582448 0.597350825980276
Rv2204c 1.58262926936979 0.497920739825516 -0.469806105721873 1.04652092485225 -0.288184934995321 -1.06782462845952 -0.383599502234630 -1.29824045950690 -0.203073151571253 0.503320439372303 -0.080672915540229 -0.403692552112255 -0.890211606660757 -1.50040130548375 0.269498346113356 -0.324602337510283 0.208795357821623 -0.389292807557499 -0.526379124667249 -1.69243578629698 1.23376878185910 0.564848747957994 -0.154020520840939 -0.512622906029893 -2.32740848773759 1.54018264770992 0.63968339888108 -0.621394006559895 1.36982917911630 -1.81861283768824 -0.427209714078651 0.258788913869938 -0.0985879282373035 -0.0851743723154863 0.412274182805676 -0.000495804517568656 -0.108706103008953
Rv2352c 1.11073877467216 -0.37000567750155 0.306101029817451 1.17750403113537 -0.638815658569636 -2.91922830512277 -0.00781266621937562 -2.60277103292839 0.6980748351379 -0.499046115503278 0.468191674001666 -1.06677071383171 -0.628229233169152 -2.99169924160789 -0.0267722998029367 0.243853528420745 0.124515440647466 0.0647086480775469 -1.82269546011572 -2.111462552664 1.0487567640428 0.328849496495655 -0.213945069245540 -0.334084640720167 0.117489834880228 1.45940623908090 0.118115562062081 1.24769146700315 1.63215697426830 -0.580368652676622 -0.966592138221355 0.841781027329133 0.558392988666619 0.308126410393279 0 -0.55013107497227 -0.560234457483447
Rv2632c 2.46763752404492 -0.00947850601029531 -0.516550057998708 2.95917215019320 -0.185277383923912 -1.43468516233002 0.119208770649168 -0.301902502950372 0.350045174126339 -0.203503636423565 0.171668966871335 -0.78310442316467 -0.151654083510694 -0.82723247627378 0.539013286582574 0.251767915722820 -0.548302056894929 1.13891794323123 -0.502573543338422 -0.501972935784518 1.49973208108401 1.33718913877241 -1.02356992808880 -0.620657765202854 -0.719756447331785 2.36800402623900 0.109672641589664 0.599203616129998 1.33433294729819 -0.532002275052161 0.0738425735427417 1.10145844067138 -0.39918880897701 0.83193696590325 -0.712619004441867 -0.108406227700966 0.714100564422564
Rv2764c 1.53464032675760 -0.000264756392983706 1.04587455777225 1.44541582669154 -1.55806134460253 -2.34856000761007 0.307247829942147 -0.772686951882409 0.506167539533805 -0.486124595538825 0.453725723140936 -0.806814314109006 -0.905401815048318 -1.54091147328139 0.176273573388931 0.304553215950978 0.303943803358174 0.287728406304486 0.65001355670573 -2.73803630056894 0.496724848116745 0.338444130295025 -0.96671922233897 -0.821584710179475 -0.697296117218072 2.21923791106042 0.0880541204077115 0.610479751201209 1.73504252839537 -1.04433351757151 0.0698862072228914 0.681629645507685 -0.143240880823517 1.48903466932676 -0.732121992593553 -0.109516705891891 1.67151256382243
Rv2876 2.26056001103045 0.352574498202363 0.553122042647623 3.52255189217063 -0.765800197594915 -1.69926623392566 0.249520376409098 -1.42185065845032 0.342528707573566 0.762740591265416 0.36374318666706 -1.08845088714133 -0.65344995181416 -1.21353791600037 0.147620970640608 0.306169070070829 0.153638188404582 1.13191256850202 -0.293763720678225 -1.12043161867216 -0.206010160631210 -0.352298835386333 -0.918265958127107 -0.505029482687814 -1.62965588829912 3.73711230298344 0.923881622160505 0.270754738979758 1.44454141778771 -1.48341817398824 0.216583941703397 0.124851824496001 0.175551533271754 0.975405867917552 -0.529133375028353 0.371325093587213 0.756544737891114
Rv2986c 1.96972957654271 0.553466723755065 0.102916791360948 1.09177072171968 -0.250832743571805 -2.01296642673866 0.465810206965418 -1.36710647187647 0.403932939301325 0.393775113185283 0.282199986316594 -0.356044995188839 -0.489993981272361 -1.51763630064927 1.69579632217614 -0.163368149217453 0.224745888969921 0.316503278823435 -2.84995190829226 -0.578124293440252 0.233093364737387 0.470237621835453 -0.104509255744788 0.139105458742455 -1.79345245202998 2.14430595940704 1.16876261666116 0.264307073169988 1.25920166066436 -1.08534626783763 -0.0434337347688476 0.100270929330601 -0.202946415362317 -0.0227661472053234 -0.326440305857753 0.414713399257325 0.113283337389710
[+] Show/hide bicluster #123 motif PSSM #1. bicluster 123 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0.066667 0 0.733333 0.2
2 0.066667 0 0.6 0.333333
3 0.8 0.066667 0 0.133333
4 0.2 0 0 0.8
5 0.133333 0.266667 0 0.6
6 0.733333 0.2 0 0.066667
7 0 1 0 0
8 0.133333 0.866667 0 0
9 0.066667 0 0.866667 0.066667
10 0 0.133333 0 0.866667
11 0 0.866667 0.133333 0 [+] Show/hide bicluster #123 motif PSSM #2. bicluster 123 motif PSSM #2 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0.111111 0.111111 0.777778 0
2 0.888889 0 0 0.111111
3 0.111111 0 0.222222 0.666667
4 0.333333 0 0 0.666667
5 0 0 0 1
6 0 0 0.333333 0.666667
7 0 1 0 0
8 0.111111 0.333333 0.555556 0
9 0 0.888889 0.111111 0
10 0 0.444444 0 0.555556
11 0.111111 0 0.777778 0.111111
12 0.777778 0 0.111111 0.111111
13 0.444444 0.111111 0.444444 0
14 0 0.444444 0.333333 0.222222
15 0.666667 0.333333 0 0 |