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[+] Show/hide bicluster #121 rows and columns.
bicluster 121
Mycobacterium tuberculosis H37Rv
14x35
[+] Show/hide bicluster #121 rows (genes).
bicluster 121 genes
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #121 rows (short gene names).
bicluster 121 short names
Mycobacterium tuberculosis H37Rv
14
short_name
[+] Show/hide bicluster #121 rows (long gene names).
bicluster 121 long names
Mycobacterium tuberculosis H37Rv
14
long_name
[+] Show/hide bicluster #121 rows (NCBI RefSeq gene IDs).
bicluster 121 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
26
[+] Show/hide bicluster #121 gene upstream sequences.
bicluster 121 upstream sequences
Mycobacterium tuberculosis H37Rv
14
upstream
[+] Show/hide bicluster #121 columns (arrays; conditions).
bicluster 121 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #121 ratios.
bicluster 121 ratios
Mycobacterium tuberculosis H37Rv
14x35
GENES Amikacin Antimycin Ascididemin_Natural_product BZA Cap Cephalexin Clofazimine Clotrimazole DCCD DIPED Dipyridyl DTNB DTT GSNO GSNO_CPZ mercaptoethanol methoxatin Min_med__succinate_ Nam PA_1 PA_21 Palmitate Procept_6776 Rifp Rox SM starvation Succinate Tet Verapamil X_109 X_111891 X_111895 X_241 X_59
Rv0336 0.193056656824276 -0.071248633089272 -0.38092654129806 0.576908580864778 0.501054468824539 -0.160791934190700 0.377685571027604 -0.296726207832173 2.15793030135781 0.258318450520866 -0.144097004953414 -0.37876020453922 0.548413343771254 -0.206516772028628 0 -0.238210081537463 -0.301044373121356 -1.25646761220740 0.579907837225999 -0.204241152509682 -0.485783847143866 -0.555919798488974 1.02351273466809 0.0930195852078225 0.239746840487738 -0.272915804687314 -0.304427503341986 -0.739084079871101 1.21483518221463 0.0206850578275968 -0.103719061984766 -0.171134466183233 -0.29221518076144 -0.306500289674057 -0.0917691066960304
Rv0412c -0.324650511047738 -0.572400650493113 -0.26255670203621 1.02076609471128 -0.99260641915938 -0.318811052576565 0.65450791232852 -0.250981478333417 3.24485379172198 -0.45126835931959 -0.0832169174530621 -0.262444825932331 0.0605496902842833 -0.176669835457403 0.202009439363616 -0.320171860339126 -0.13769339697173 -0.34819118818227 0.582655124708069 -0.272547860302042 -0.42246879085761 -0.919045828706685 0.824123427893474 0.0626471918389395 -0.70228124213034 -0.111906177084994 -0.202607217555482 -1.1093898966219 -0.400447103504756 -0.361856937408426 -0.369189766473311 -0.385326307338268 -0.0464868125352022 -0.153855285621312 -0.382906142613327
Rv0922 -0.349062726265524 0.381197376316236 -0.234125615662861 0.443739433310877 0.517104346285439 -0.20517519212561 -0.441964524603829 -0.120860971156642 1.08221875471722 0.04842859686067 -0.0748097890750104 0.25796578589378 -0.331179064651847 -0.527902467791161 -1.00162927344348 -0.106762691482851 0.0103358798511967 -0.643399807767232 0.402483509364996 0.353784733643968 0.00440184343901802 -1.15530285902697 0.125719167385779 -0.620861678515447 0.697781953266836 0.639997750480375 -0.216293174110797 -1.10252293859235 -0.317515526195460 -0.450903574523484 0.236606307567397 0.0729844438300182 0.042940216274985 -0.330433074253215 0.261285460019668
Rv1063c -0.403027506481995 0.195035633238586 0 1.26394971010524 -0.112768611628111 -0.0329308495794886 0.485762472809183 0.402972021838007 2.30560561925897 -0.342879412543652 -0.0912923079084264 -0.107381425624716 1.10999525322971 -0.472615299238923 0.389472971471349 -0.194913675835487 -0.186479035447026 -0.181340650534805 1.32336318432692 0.428518164769807 -0.0901871041666755 -0.0359793530753042 1.54673789648195 0.094693984093461 -0.264243545747257 -0.359030435829031 -0.213600897962108 -0.0419517328261913 -0.525529303939623 -0.145672023632766 -0.186261355296551 -0.104325175467565 0.0135539507684446 0.148156681751837 -0.242165543724837
Rv1405c -0.216732490170794 -0.360067017343647 0.213653611599820 -0.156479805934284 0.0663726207433872 0.0466991432739276 0.483536261888288 -0.345111049526057 2.25018714697711 -0.196919354752142 -0.226342470328565 0.00311975186479961 -0.65446301786923 -0.126042547906890 0.193584302479275 0.167546216952950 -0.324077579297962 -0.0412905452027024 -0.206648249519841 -0.143754133424813 -0.224678111563333 0.181152497112655 0.00485820536238967 -0.465118157046312 0.334630426842009 0.0732813034089057 -0.242329313161222 -0.162718239806844 0.210237113488004 -0.444247496473742 0.00968445052882256 -0.194260601908157 -0.074499178735888 0.0171660856219472 0.16248322312227
Rv1588c -0.308948718793898 -0.140218327589039 -0.100184482272848 0.679080982524128 -0.226649406247176 -0.301840036261545 1.01433299426304 0.0873582299500084 2.09865604592428 -0.146466271396916 -0.369343262853226 -0.117337588302189 0.340922865689983 -0.269437495892300 0.175204153726600 -0.186173778774226 0.30605292976374 -0.565970236859665 0.452262239869466 -0.0891846944520669 -0.0550170215724457 -0.171708180865165 0.424403375088318 -0.437945240659644 -0.61757612200867 -0.45284303680006 -0.204136940123096 -0.0171558777009627 -0.196486766298822 -0.447457918610743 -0.210728730072506 -0.283689890189555 0.118244182453955 -0.0905411479780674 -0.284906584961511
Rv1702c -0.381062275487802 -0.0113689114563849 0.0309084215724864 0.276999348810982 -0.429307351023006 -0.195848843813557 1.44495557608185 0.0405251556349695 1.10068533923942 0.0421131780450182 -0.504484391666154 0.0757044981293186 0.442773955204379 -0.228092606212554 0.0873463139695422 -0.0840365396191751 0.377462935590717 -1.53085654219081 0.346912046004267 -0.197472578828392 -0.196521534255209 -0.277271132716961 0.274125758904331 -0.0556286529798597 -0.222038887769857 -0.489607902250709 -0.566138860645984 -0.0820011755490542 -0.858356721144187 -0.0424825607712189 -0.342101311369019 -0.105589386958316 -0.558159077264144 0 -0.347502697114393
Rv1765c 0.0792938006245209 -0.387369304458991 0.0958677546721516 0.502252376193113 -0.0745714041219778 -0.202571805654781 0.506769783036865 -0.196545985617747 2.49145824779513 -0.26477289217394 -0.485335449364531 -0.054946955292506 0.550262807671655 -0.794174873695413 0.0187918448533761 -0.121120072232240 -0.750749359730447 -0.441716704180718 0.328714269815789 0.425106409365097 -0.11467329864487 -0.852204235867684 0.923159982723784 0.0248421888697086 -0.244289704963596 0.00252927474084245 -0.490483361122625 -0.69636331096421 0.0389119931479118 -0.253500677025926 -0.232040292971015 -0.375757791334252 0.162127158909210 0.157574258521307 0.252086661606109
Rv2015c -0.226826346534657 -0.294400026714495 0 0.540341808579683 -0.291066605920263 -0.274931296736634 0.340997120199264 -0.31523271322317 2.21694045068518 -0.102637811791036 -0.280325064324437 -0.192683644388138 0.0446345599167703 -0.752408571889252 -0.302654978054587 -0.409806570930897 -0.646384204352045 -1.42913046852497 0.438272693031045 0.348039213506755 0.0838098909961976 -1.04095241037139 0.74269356467654 -0.117191807540856 -0.301680078832768 -0.0425014237394144 -0.793066791644968 -0.960192333971996 0.359794708098416 -0.205232032855946 0.261225923985811 -0.310697366811060 0.120045223584726 0.374542070933669 0.384138672123367
Rv3010c -0.396754605813694 -0.33331384740041 -0.0994820655412473 0.528529069048085 0.0542161038314392 -0.273695552234465 0.413394443819445 0.0387166340198366 2.19157546851481 -0.357446679957207 -0.890162981218274 -0.527513683362023 1.12764738471143 -1.22809713942121 0.884657207588825 -0.322689368870901 -0.912047609538628 -1.17270582536050 0.734761226884799 -0.364194549948839 -0.263798399842271 -0.531835425902972 1.89861927706833 -0.219376765658686 0.229009145139878 0.166419256330272 -0.317187572642721 -0.609422548197206 -0.77740904895761 -0.423063275435636 -0.0754584637872999 -0.236899223098034 0.110012063744613 -0.0314470366406959 0.0900341920229213
Rv3206c -0.618265263036539 -0.346685542234227 -0.107035996042347 1.17288784901660 0.112188662143003 -0.00488179685692982 0.567553538747734 0.0183675693433584 3.23102782741078 -0.674982734728907 -0.380163157124376 -0.150211009552401 0.170411962528108 -0.217567169777762 1.08686817820440 -0.115324658231488 -0.385994969758697 -0.957156056829523 1.13981648179375 -0.183215593760784 -0.121036645317284 -0.643897152238314 0.665639464190983 -0.446217328478403 -0.298199813596088 0.133416264821279 -0.104570889662747 -0.531998419203151 -0.206635914059798 -0.00925366237433 -0.198455838843149 -0.432339927443624 -0.15423437978504 -0.0230197378510167 0.0611564779479223
Rv3245c -0.834472141416432 -0.595696771747528 0.0577851090072661 0.909681097343752 -0.697457855456811 0.296549620074133 0.917086893450853 0.205870565104872 0.828605963698447 -0.0177978943285895 -0.0706206979578385 0.0772772403487563 -0.656200632070704 -0.494179362123084 0.238558427146740 -0.464545559917535 0.09978030691194 -0.555328025998626 0.481735674411195 -0.137608716407394 -0.483371124146622 -0.468281845006573 1.66045210416959 0.239730507183123 -0.825595555351863 0.0347302911414203 -0.70658153351063 -0.214251074510829 0.112111443472551 -0.526595625699325 -0.0464610523844626 -0.295895519324292 0.208343208082487 -0.0254360423588478 0.28602581890421
Rv3424c -0.175975380916883 -0.209838273088494 -0.184152921296819 0.137773755506291 0.132222310796140 -0.45663907162982 0.449569061857576 -0.197952674383234 2.79521727158550 -0.0429716325402111 0.51478005813424 -0.0922176873913033 0.66051577780957 -0.495077076650037 0.462184195002179 -0.184910528673351 -0.248036732872278 -0.797337360119984 0.542431058420519 -0.445303669771248 -0.47691697258887 -0.396913506704583 1.72540746728022 0.341740390772747 -0.317165083250145 0.0222847695339738 -0.0301245583566956 -0.422600872648006 0.753240567876508 0.533094266494967 -0.599197173786695 -0.199883700538905 -0.450803598057346 -0.0300733716337895 -0.201547755528468
Rv3466 -0.341523315945156 -0.189530439661350 0.0558590966263613 0.562047936618592 -0.268571645375858 -0.288960802609965 1.10079931445190 0.152140569871214 1.37926060498317 -0.169943764949689 -0.226748278145579 -0.265577207683570 0.179842457954300 -0.377244487406563 -0.00617956704530552 -0.105006786588667 0.313584429241379 -0.852793496011909 0.425725017324919 -0.0719389130747103 -0.0183656483152071 -0.289463307814194 0.301609936026466 -0.381964475089587 -0.734256147329763 -0.593515110810274 -0.34224764385871 -0.151325639241252 -0.107285951403136 -0.392642795377919 -0.172793928819198 -0.264044163440655 0.20365597509496 -0.115778848056473 -0.190010878092552
[+] Show/hide bicluster #121 motif PSSM #1. bicluster 121 motif PSSM #1 Mycobacterium tuberculosis H37Rv 23x4
POSITION A C G T
1 0 0.125 0 0.875
2 0.125 0 0 0.875
3 0 0 1 0
4 0.125 0.125 0 0.75
5 0 0.875 0.125 0
6 0.375 0 0.625 0
7 0 0 1 0
8 0.375 0.25 0 0.375
9 0.25 0.5 0.25 0
10 0.125 0.5 0.25 0.125
11 0.25 0.625 0 0.125
12 0 0.375 0 0.625
13 0 0.125 0.75 0.125
14 0.125 0.875 0 0
15 0 0.375 0 0.625
16 0.125 0.5 0.375 0
17 0 0.25 0.125 0.625
18 0.125 0 0.5 0.375
19 0.75 0.125 0.125 0
20 0 0 0.375 0.625
21 0.25 0.125 0.625 0
22 0.875 0 0 0.125
23 0.125 0 0 0.875 [+] Show/hide bicluster #121 motif PSSM #2. bicluster 121 motif PSSM #2 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0 1 0
2 1 0 0 0
3 0 0 1 0
4 0 1 0 0
5 0.666667 0 0.333333 0
6 0 0.333333 0 0.666667
7 0 1 0 0
8 0.333333 0 0 0.666667
9 0 0.666667 0 0.333333
10 0 0 0 1
11 0 0 0 1
12 0.333333 0 0 0.666667
13 0 0 1 0
14 0 1 0 0
15 0 0 1 0
16 0 0 1 0
17 0 0.333333 0.666667 0
18 0 0 1 0
19 0.333333 0 0 0.666667
20 0 0 1 0
21 0.666667 0.333333 0 0
22 0.333333 0 0 0.666667
23 0 0 1 0
24 1 0 0 0 |