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[+] Show/hide bicluster #120 rows and columns.
bicluster 120
Mycobacterium tuberculosis H37Rv
20x35
[+] Show/hide bicluster #120 rows (genes).
bicluster 120 genes
Mycobacterium tuberculosis H37Rv
20
[+] Show/hide bicluster #120 rows (short gene names).
bicluster 120 short names
Mycobacterium tuberculosis H37Rv
20
short_name
[+] Show/hide bicluster #120 rows (long gene names).
bicluster 120 long names
Mycobacterium tuberculosis H37Rv
20
long_name
[+] Show/hide bicluster #120 rows (NCBI RefSeq gene IDs).
bicluster 120 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #120 gene upstream sequences.
bicluster 120 upstream sequences
Mycobacterium tuberculosis H37Rv
20
upstream
[+] Show/hide bicluster #120 columns (arrays; conditions).
bicluster 120 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #120 ratios.
bicluster 120 ratios
Mycobacterium tuberculosis H37Rv
20x35
GENES Amp ARP4 Ascididemin_Natural_product BZA CCCP Cerulenin Clofazimine DCCD Deferoxamine DNP DTNB DTT EMB GSNO GSNO_CPZ GSNO_KCN H2O2 KCN mercaptoethanol methoxatin Mtm Nigericin Novobiocin PA824 pH4_8 pH5_6 Procept_6776 Rif Rifp TRC TRZ UV Valinomycin X_111891 X_111895
Rv0055 0.404118125130279 -0.154217786350779 -0.514725179416604 -0.153913449228672 -0.218023244859130 0.645282175490668 -0.668552150595062 -1.36751901591099 0.501868807050149 -0.601635474298607 0.303149626231446 -1.05814502564794 0.0553409828525461 0.601788416907413 -0.934282531756142 -1.36592671766609 0.82851848818531 -1.95101324068668 0.223870279578191 0.331200426797799 1.14477805559982 1.32058281579195 0.256946955796923 -2.14587816195986 -0.437186732798268 -0.0199784718550933 -1.51532106799507 -1.08803428189673 -0.0427828341687975 0.0151887104988176 -0.706205262659979 1.37224625163777 -0.247000179720587 0.129791084537554 -0.441245171787661
Rv0056 0.228544934335000 -0.666926397523881 -0.392492961289436 0.326234388706762 -1.57142275334752 0.605953501032527 -0.645328006750312 -2.77346414849707 0.572840742100133 -1.41608970360530 0.0413585273461438 -1.30311510854914 -0.0257088397201900 0.320700342819342 -0.972965272426803 -1.86093403004223 0.753166239518796 -2.88179017079169 -0.292443643696513 0.160017899114326 1.26629666828212 0.81101812495222 -0.363421175760280 -3.20983243679063 0.0105749990723558 0.527070188349206 -1.81517747169491 0.015812959686932 0.353560431728582 0.280340094174224 -0.910604061396217 0.87127416397892 -0.857650749678723 0.392960589131087 -0.268459401515556
Rv0707 0.540335085940967 -1.39750160010272 -0.333370849979869 0.266156350458909 -2.82830118600307 0.398331272096386 -1.63228238997456 -2.62130395645013 0.466855899704410 -2.91342379313591 0.172771206367139 -1.31470426526004 0.338352491325109 0.401856226533252 -1.27402607475235 -2.34193545483248 0.516142584993539 -2.8371541272971 0 0.182610957210659 0.8973123026711 0.262926768706291 -0.243339431570404 -2.73966278456798 -0.0318614631826765 0.294738828703562 -1.22060500947065 0.546962324475057 0.69070293472409 -0.364578573261684 -1.44424967172241 0.89615773246556 -0.0560293741786252 0.480913959190849 -0.363484885847557
Rv0708 0.84986691565611 -1.24311632038129 -0.240952939139917 -0.345028292342143 -2.71635492130859 0.729299599598942 -1.35139133098356 -2.07306064340782 0.678551141720307 -1.90656117761143 0.533116540256042 -1.43755271226671 0.302855062712917 0.710916266851857 -1.70894181604630 -1.51491736195554 -0.07136279672421 -1.8759671419275 0.368435304709789 0.57072509554628 1.29458355875726 0.60239045824699 -0.175988957617841 -2.32813794106309 -0.307309030496737 0.373753822449568 -1.62323010302115 -0.267107466004171 -0.462721735031019 -1.07106213879821 -1.41628442534443 1.13705650565047 0.114325679348862 0.584189759169862 -0.209936532287561
Rv0714 0.626547037153312 -1.16230750738633 -0.302745978415407 -0.65727294968669 -1.80578083467571 0.525017070683436 -0.673668971173193 -2.52915377392861 0.43339626776627 -2.12070142149908 0.296758305496644 -0.841782080323305 0.163100831996532 0.308976299521394 -1.61544329366246 -1.28865718671330 -0.231686616284190 -2.13501930402703 -0.0200968883551667 0.344438257079132 0.641245665836184 0.776730613668024 -0.172557518155744 -2.00067419608646 -0.00669360577523927 0.203769369748234 -1.02948370154247 -0.751113254798628 -0.438951961704226 -1.02189914309329 -1.56194703804337 0.631051486797177 0.686756236802018 0.310922255754509 -0.360463166811403
Rv0715 0.590826391346502 -1.140474293899 -0.138186996686073 -0.565502679918938 -2.10380864997925 0.627979549974575 -0.762939798422751 -2.64867231241603 0.480587126540922 -2.56452878713721 0.356397175994216 -1.09430711927500 0.248804652791687 0.421570793052365 -1.84159450333267 -1.46103325585455 -0.277800650705671 -2.10877898906639 0.142033584838250 0.488971776721797 0.640033604524288 0.539353083039014 -0.338170903818971 -1.77585707671441 -0.277836533627532 0.0398833051227227 -1.32328543768622 -0.420799246827806 -0.0787853846407868 -1.01093232607284 -1.77725667602606 0.679283300291708 0.282844977332235 0.396941452835998 -0.274141118172874
Rv0719 0.751126431686297 -1.08124640134594 -0.146089607444526 -0.264692282652515 -2.48347051237546 0.549793397017215 -1.00604179766322 -2.48290190974908 0.495537005247042 -2.57481716312405 0.65422095470314 -1.29916328794687 0.388065787543836 0.572821790268205 -2.14129747747099 -1.69993488204271 -0.277966767256309 -2.32891865965184 0.267941807025688 0.685257872246132 0.680644374495446 0.658880845637642 -0.354034276943389 -2.30641454293681 -0.785074188384839 -0.2611121971432 -1.30831035547276 0.426337367986053 0 -0.85246201446294 -2.02121719231196 0.80078605921484 -0.353958923682789 0.688870604932183 -0.193200306594778
Rv0871 0.338634099396977 -0.96467032671996 -0.397693467358316 -0.436359800196707 -1.85861572560676 0.757275991664888 -1.26873726536509 -2.88298312582143 0.462477976562093 -2.00704966959834 0.0538503145077003 -0.897575208684452 0.0983695539859475 0.0180385080768692 -1.58572075020823 -1.45084875164219 -0.0376815139044288 -1.28073120879545 0.237623743046604 0.195842426955122 0.537643829855179 0.64076362605982 -0.905528264325658 -1.78368182545673 0 -0.276234662509148 -1.20089053026436 0.144576431099699 0.858089660679852 -0.603843194290064 -1.61806265571065 1.07877894963016 -0.183269527561670 0.331805964078141 -0.274807570392262
Rv0891c 0.400099674236302 -1.95199029782871 -1.02908000168454 0.693009029574035 -2.47346814975495 1.12638553677566 -2.52239762669098 -2.17646858814843 0.155538724880937 -2.06979249691697 0 -1.52901254171895 0.792389360809592 0.175874790229009 -1.72684918460031 -2.07817727585377 0.552432142826015 -1.47698878595108 0.478337378931797 0.0237533887877023 0.459633280871812 1.15852903530798 -0.126325209566323 -2.46081012138141 0.158170422131588 0.220069257173603 -2.22563749869865 0.600172854310918 0.206538236007665 -0.97763781300492 -1.67252970149258 0.353917286307677 -0.609251930793941 0.375674644715257 -0.573123153180324
Rv1516c 0.786196568347233 -0.7920434764297 -0.233774903241568 1.20972402637768 -1.02459760360568 0.400968164930529 -0.621238302204861 -1.84523678969197 0.294204018793282 -1.00098310899619 0.304807731656455 -0.936338025877546 0.372075992378625 0.143521449222009 0.252665042849329 -1.00334193057974 1.38162517738992 -1.92638795842122 0.0358420541689845 0.346195347156971 1.72566107496011 1.27150913801417 -0.610459709742202 -2.85001037325571 0.419436797793805 1.1983998868188 -2.05769368582362 0.96022669212391 0.926293626683499 -0.731712389718854 -0.702801604558677 1.10135808905628 -0.74673961636356 0.470211095557847 -0.337306163876755
Rv1857 0.216181550262754 -1.16871312765108 -0.297424606356787 0.254078572943921 -1.86073891669506 0.272111260983887 -1.37360095202783 -0.729096172749645 0.591662999436714 -2.56263395827200 0.155895740065059 -1.15453585794432 0.741565710497075 -0.0598890352698984 -0.207885540753362 -0.281753477207707 -0.0558328544421548 -2.48709775679398 -0.00124183245835929 -0.110675116417513 0.399531470108153 0.87900289209428 -0.461537659135285 -3.25006068471048 0.333931546275172 0.323400930502993 -1.54995636448822 0.788449311410352 0.0732744598639162 -0.999643613844122 -1.83378662298743 0.551653948225219 -1.44814157756854 0.370000557917822 -0.793548422143587
Rv2275 1.02741293699814 -1.27828230372803 -0.872694725811788 -0.0495462621170452 -2.37900151022435 0.648829539328013 -1.98115577826527 -1.27691905161420 0.696753899242982 -1.7683218630092 0.71873254681568 -2.08139323509423 0.0808998458738142 0.729740036427482 -1.50535526785757 -2.54417179928206 0.0365440267860214 -1.62562939413395 0.89358946049362 0.718668667714338 0.700769606728656 0.857907221220473 -0.728527232876031 -2.70575430161425 0.0072134154382131 0.0924483890254264 -1.57925784471724 -0.088543487012479 0.276573313436787 -0.547826251369557 -2.07152764210129 0.0446333984099636 0.34995738703059 0.890653098397095 -0.948631076986542
Rv2445c 0.6534362496022 -0.333616987167972 -0.691901873836532 -0.0656651678638168 -2.15063054454824 1.09738621202672 -0.562773242664621 -2.91279213780314 0.342609932679682 -2.62428031057501 0.43471163710187 -1.43192399764498 0.271426844472470 0.417917119876016 -1.04513713004981 -1.35254394318952 -0.158874825239266 -2.58621942714165 0 0.39285352182279 0.782751726652206 1.31616088163997 -0.140991963104270 -2.30350859030546 -0.187798467210709 0.307875183638798 -1.10413750333459 0.150785961764592 -0.0952244999308813 -1.12796792158651 -2.19113222008579 0.441148443112249 -0.61315726303743 0.297308566775854 -0.708268747531547
Rv2763c 0.382493976824889 -0.405548972170943 -0.509790512138774 0.715209699268135 -2.61244077740835 0.0491980134214539 0.0381069281818652 -3.00806277482916 0.503971946385192 -1.11093890329629 0.442374762681652 -1.48817375333148 0.488256313046068 0.503081613089614 -1.42472910521534 -1.5667591391248 0.185700716888343 -3.73186631968372 0.497195816344182 0.749348977974026 0.571146759836918 0.48390376528278 0.176756592287840 -2.9607280126114 -0.061368488136628 0.0746226594891998 -1.55105738809952 0.735160251904155 0.089340994666397 -0.959930599178175 -1.76016971983377 0.770888027838996 0.550319054311311 0.578885507411037 0.00197255494479961
Rv2908c 0.542897735042613 -1.02863109248057 0.0771508454735149 -0.345995084244482 -1.42057373147608 0.581852490948591 -0.941429213810675 -1.77703370623505 0.50900122961484 -1.41508866148604 0.137804337400556 -0.0897697831818839 0.0438838967226722 0.235656323920008 -1.64366663974923 -1.08150643451163 0.170415559194668 -1.72135983639302 -0.0622102126760778 0.254566357039398 0.583746450900358 0.451225261652018 -1.78288153754401 -2.51820872198943 -0.502985889533995 0 -0.828053875995859 -0.166876482350555 0.318273817948253 -0.431355028607442 -1.58185623293756 0.553550818405317 0.285224509811634 0.38267867270414 -0.0905114052978767
Rv2909c 0.46754897704088 -0.66969907973023 0.115628978777996 -0.00984144634659782 -1.84062581754807 0.810441900912231 -1.10921665841185 -2.02124250491652 0.317349814244511 -2.32071980395478 0.28490683535272 -0.624661954820196 0.378635654154129 0.256830733604772 -0.573966904659017 -0.67381419139686 0.364880515034453 -2.32984134961023 -0.067747395825125 0.214136726682966 0.478916798921657 0.494529395717681 -1.45583844020303 -1.69490765193881 -0.383048648373695 0.0366238238545845 -0.743985596256198 -0.0962446072125629 0.201180025606040 -0.93922286808203 -1.04621189060194 1.04288905284047 0.375423803428187 0.250803058825277 -0.120002968469079
Rv2959c 0.422798401191738 -1.41743848198526 0.380135746242769 -0.263332790341474 -2.30351283485474 0.92140661171619 -1.34300987355880 -1.77107736290987 0.818124466720991 -1.52460423371629 0.602681906197993 -2.36841093206413 -0.0122333699791542 0.829094667274558 -1.79163787131865 -1.99611035100761 -0.199263043415998 -2.06790802163303 0.163879591411616 0.831402865177427 0.979950860643376 1.62069901043857 -1.28269581305564 -2.22132570350585 -1.23988485826475 -0.282446252104706 -1.27512085499405 -0.122151081803316 0.11531359493346 -0.37856688606788 -0.925161370856353 0.657887150336356 0.115019067485777 0.472382377152817 0.0386278098010359
Rv3102c 0 -0.3458690585941 0.353080191342075 -0.432260707198769 -1.43111304612594 0.76291670357497 -0.94836527517649 -2.21018074920303 0.529423252763105 -2.54385515328628 0.609327585042895 -1.36732763772397 0.151906992437652 -0.346003056052395 -0.931779688171253 -2.75723973104218 0.896669633325805 -2.79967028515680 -0.08942380415974 0.0429972096545477 0.59180943894384 2.0265697125492 0.449063959441195 -3.04780891933582 -0.332264506113752 -0.15490624070137 -1.51073172381105 1.01531706812241 0.0199105319828617 -0.553773043777088 -1.52948252834215 0.432893697977231 -0.409788261721126 0.0842556995388298 0.300743464357833
Rv3172c 0.399170995905551 0.294023847446233 -0.23559655625072 0.69977738307919 -2.44916025640529 0.368657732440916 -1.21776361724445 -2.27359460569343 0.344649816510225 -2.17125084754211 -0.114686291911769 -0.815870160579334 -0.129734938195975 -0.0174091957346961 -0.778181754810009 -2.18679484695841 1.29558332813562 -3.66613397455026 0 -0.0388323866629158 0.955512707794181 0.900486197651203 -1.23954413762284 -2.83580176805151 0.0922175631762745 0.550659663867988 -1.10374863680981 0.121319968902658 -0.314781145325222 -0.158863206146741 -0.409980943204211 0.933910801697354 0.317815114678763 0.098795378215921 -0.522403683459845
Rv3481c 0.33396449035271 -1.47467245664995 -0.625690850237352 0.963275831063192 -2.83253620307064 0.0611210171580348 -1.59948720753561 -1.33234237457630 0.296269934814400 -3.24825127104359 0.213667967901261 -1.90863219822273 0.33289740335114 0.117297473076512 -1.46331984614935 -2.62427174046005 0.956381355988489 -2.36025881383417 -0.387421101503939 0.0232465227156199 0.4753433986015 0.128056557751404 -1.61385792801269 -2.86962202419414 0.252870592653901 0.445797969667731 -1.07478506800871 1.07816649620201 0.198153250457230 -0.21715592193654 -2.02833024407283 0.168814078861608 -0.683328767287796 0.230093300626639 -0.0495670470591494
[+] Show/hide bicluster #120 motif PSSM #1. bicluster 120 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0.625 0.25 0 0.125
2 0.25 0 0.5 0.25
3 0.25 0.5 0 0.25
4 0.125 0.125 0 0.75
5 0.125 0.75 0.125 0
6 0 0.125 0.75 0.125
7 0 0.25 0 0.75
8 0 1 0 0
9 1 0 0 0
10 0 0.25 0 0.75
11 0 0.75 0 0.25
12 0 0 1 0
13 0 1 0 0
14 0.375 0 0.625 0
15 0.875 0 0 0.125 [+] Show/hide bicluster #120 motif PSSM #2. bicluster 120 motif PSSM #2 Mycobacterium tuberculosis H37Rv 10x4
POSITION A C G T
1 0.5 0 0 0.5
2 1 0 0 0
3 0 0 1 0
4 1 0 0 0
5 0 0.75 0.25 0
6 1 0 0 0
7 0 0 0 1
8 0 0.25 0 0.75
9 0 0 1 0
10 0.25 0 0 0.75 |