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[+] Show/hide bicluster #116 rows and columns.
bicluster 116
Mycobacterium tuberculosis H37Rv
20x34
[+] Show/hide bicluster #116 rows (genes).
bicluster 116 genes
Mycobacterium tuberculosis H37Rv
20
[+] Show/hide bicluster #116 rows (short gene names).
bicluster 116 short names
Mycobacterium tuberculosis H37Rv
20
short_name
[+] Show/hide bicluster #116 rows (long gene names).
bicluster 116 long names
Mycobacterium tuberculosis H37Rv
20
long_name
[+] Show/hide bicluster #116 rows (NCBI RefSeq gene IDs).
bicluster 116 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
30
[+] Show/hide bicluster #116 gene upstream sequences.
bicluster 116 upstream sequences
Mycobacterium tuberculosis H37Rv
17
upstream
[+] Show/hide bicluster #116 columns (arrays; conditions).
bicluster 116 arrays
Mycobacterium tuberculosis H37Rv
34
[+] Show/hide bicluster #116 ratios.
bicluster 116 ratios
Mycobacterium tuberculosis H37Rv
20x34
GENES Amp Cap CCCP CPZ DCCD Deferoxamine DNP DTT Econazole GSNO GSNO_CPZ GSNO_KCN GSNO_menadione H2O2 INH KCN Nam NaN3 Nigericin PA_1 PA_21 PA824 pH4_8 pH5_2 Procept_6776 Procept_6778 Rox Tet TRZ UV X_111891 X_121940 X_241 X5CL_PZA
ORF02072 0.595551416810317 1.49563891763402 -1.66504654830983 -0.0682819065863854 -1.63863275675822 0.278251997856533 -1.56543487459066 -0.684198227861496 -0.135093362718467 0.145651504849021 0.00997285146191283 -1.28691264751599 0.196749800776127 -1.52724353926363 2.05243703360281 -1.67440572724260 -0.559373218832202 -0.307651609068478 0.709497487427422 -0.134246305361295 -0.253256245897838 -1.67037075384067 -0.215428946660746 0.322475132695048 -1.11715975545326 -0.96168996599461 1.84497339090779 2.99718763194695 0.169954822423497 -0.252475171251149 0.191434030883740 1.2362492973166 -0.194654520301661 -0.246387102582098
ORF05284 0.753839711319755 2.10232630369355 -1.60567340164533 -0.865321558144418 -2.29959101105336 0.238358293007983 -2.21142741667992 -0.753203710596792 -0.0916017708249082 0.415913429450702 -1.23331875686198 -1.15367689300014 0.180521374802731 -0.776864171493439 0.76320844046039 -1.78401703125694 -0.823495622140906 -0.268831062128144 1.00506356233887 -0.339484327468244 -0.0414007534446044 -1.94089323566914 0.230872933467229 0.378255259687977 -1.64367327341057 -0.534834801602694 2.13184417245398 2.26893112823631 -1.32422292180188 0.247270890049813 0.118282881041257 0.206462532367895 -0.619936532604067 -0.62390865475027
ORF06170 0.235758592015014 1.74560218191239 -1.25104466056113 -0.90829113266058 -2.94116524587979 0.324489921611188 -1.73197566593632 -0.372532760509469 0.481624171794188 -0.334904385041392 -1.18831303553841 -0.510427779494812 -0.109488449455673 0.0367825418545034 0.940111540843332 -1.51469040388737 -0.591079834072029 0.0989484592906118 0.190964132020261 0 0.0451961181055607 -1.33082599705321 1.11789040050537 0.0750475535817072 -0.213295481765275 -0.609331805040616 1.65013771845791 0.679652178357246 -0.126083827852469 0.844615038083465 -0.322348742558344 2.05954460539395 -0.134926547932458 -0.792919208918156
Rv0682 0.235339744568893 1.56073671026254 -2.38021873091000 -0.886408893154432 -2.03693426221714 0.341283526980059 -2.52624823470771 -0.0455825156214448 0.0414233510827695 0.512226943751046 -1.25596266890160 -1.664745372906 -0.196848767851985 -0.165623613973734 0.19283248246487 -1.81399582853878 0.186977740706328 -1.12761875504058 1.40946999507148 -0.267809527028269 -0.112394305427568 -1.98884259216819 0 0.0440428243599294 -1.24850517538931 -0.304991822255098 1.45288375771084 0.610411388664362 -1.21493163106494 1.11027659900344 0.29703169790168 0.715925013002556 -0.353739523670497 -0.354469312551913
Rv0739 0.289017175970914 1.54523979432156 -1.40043345653132 -0.215881140805119 -1.68127960420534 0.471760801961087 -1.27828172848749 -1.41854513589083 0.152536866275141 0.613501913291817 -0.726950863880099 -1.75462232094732 0.203124991963822 -0.347668951788184 0.0628514626485336 -2.36640989077410 -0.247257997680647 -0.960331790663664 1.12138028860756 -0.531726565472339 -0.640278516433125 -1.51896923192453 1.09096287720855 0.703123122469529 -1.68466434258032 -1.03434987283330 1.58418302255549 1.90647207189028 -0.244336363686046 -0.295995011967741 -0.186169545436342 1.03142168546995 -0.464369785999867 -0.302665322959544
Rv0740 0.200639594697966 2.22724369274304 -1.20165451635789 -0.236089087546978 -2.33756748289248 0.514833463121521 -1.78042283860520 -0.401966496138499 -0.237038783325796 -0.0701466887022253 -0.273849932092569 -1.44993560822296 -0.165018043065693 0.359885259973054 -0.509811647190204 -1.40667902678739 -0.225465171733493 -1.02650206936391 0.319557629838003 -0.541885851876706 -0.445918430367481 -1.89687305905772 0.526525712118126 0.766564469589496 -0.91151570076889 -0.342720248344865 2.48518396062971 1.75076132809751 -0.288884815987276 0.197132913007002 0.0328599052497072 0 -0.772511911267985 -0.710348964203364
Rv1637c -0.322994909616379 2.34967388349704 -1.16873522608149 -0.162195716857971 -2.10806272695643 0.46973751150432 -1.72443197231002 0.130365466831754 0.678944813545863 0.331253947430913 -0.181004962045297 0.0528938596381319 0.873364284489933 -1.27982168938062 1.20102146589925 -1.12016751729947 -0.616184968591848 -0.169669194228033 0.467376282727914 -1.08413194703762 -0.794709531151895 -0.572510883742438 0.0660878047058633 -0.108273023655196 -0.845669551281852 -0.304496443229007 1.55940893666806 2.17876854659171 -0.371244122014644 -0.699281876705142 0 0.815803718436246 -0.63613534606315 0.285212256661386
Rv2075c 0.623466982598806 0.620745653186617 -1.94290028326826 -0.927204850721875 -1.53422034201662 -0.0225806649174097 -0.750382418462004 -1.72107127434022 -0.155187257877547 0.493801674381338 -0.439995300677794 -2.02224714226341 -0.962707504691868 0.0126603231022589 1.43386935664833 -1.77777635137904 -0.064718818615935 -0.281948652564867 0.578244234737712 -0.651410677541556 -0.0597720364561451 -0.50426501813962 0.806319549102358 0.762305509368374 -0.855617159238295 -0.328806280698182 0.979571256297994 2.00363417151686 -0.706130460679872 -0.00737168780967157 -0.126990342274451 0.94381010712376 -0.177467161701098 -0.80866914771644
Rv2132 0.619898978688995 0.84975244402064 -2.64992937169580 0.0759245490556297 -2.03272331273395 0.253183409986618 -2.1909752140231 -0.220906655447103 -0.285574586318784 0.591234106906662 -0.188349234782074 -1.45735230798909 0.261668666157155 -0.311848706824246 0.771139282516105 -1.98121102004695 -0.150863423368120 -0.995405361625123 1.74388565228800 -0.831226570950253 -0.74001110853935 -0.416087260140421 0.565541538161796 -0.120115166023751 -0.315291344206208 -0.433417354630006 2.64537202326599 1.33337627276282 0.693675423357487 0.200480540241677 -0.170303245311214 2.22792703577981 -0.443608246144241 0.0412242478824424
Rv2205c 0.149092648750546 2.20706353912002 -2.44229227044297 -0.764058248287011 -1.39476218309344 0.109958369157669 -2.41379406329622 0 0.144398894463880 -0.00455934270918177 -0.755466409149748 -1.06222046408717 -0.685508804994423 -0.267316950707336 0.596487545026359 -1.03080237481029 -0.268068297642198 -0.273807581364584 0.701082440705175 -0.343729296175254 -0.15245285600458 -0.599924298761539 0.14088164124211 0.303713529241345 -0.94170871977993 -0.438783855652345 3.14570088402922 2.22391382652723 -0.659364091901821 0.466691580996414 -0.155723800709167 1.99068204155138 0.0426114826587955 -0.396569281978054
Rv2412 0.916385584078163 1.80362407936185 -1.46976880033277 -1.03448377867368 -2.51144097384487 0.725787643763045 -1.90728868039592 -1.39276231398360 0 0.393000090387199 -1.67184965197237 -1.71928814511812 0.179663364449783 -0.145995625484043 1.26428645114131 -1.58571860451326 -0.809329150287486 -1.30886370004376 1.19734424663169 0.278264903089793 0.300372778977129 -1.83131690340800 -0.154892773374712 0.39410936735181 -1.34430433769240 -0.112179134692572 1.59222925363795 1.61511291654181 -1.28690371457298 -0.157362982182693 0.642039063579137 0.828866968183045 -0.610875774136418 0.202361969347762
Rv2585c 0.979355350245419 2.32663543746866 -1.99762584732473 -0.358279232012314 -2.84502068623918 0.301721651887174 -2.21089068829413 -0.86010596253085 -0.103095298374365 0.316299816960377 -0.677432320347426 -1.53064452555222 -0.998468039005638 -0.565964613853714 0.349076775365206 -2.14078567555076 -0.411010898646316 -0.860749466083341 0.435387116141572 -0.31687621051778 -0.00409411791758078 -3.15618424790128 -0.0468107778305334 0.0088311150554439 -1.65503949810076 -1.02526332083312 2.21816989529022 1.49589707407233 -0.492157361426304 0.745276308280314 0.184768832467283 0.368466179366203 0.534566876192373 -0.429676994344828
Rv2840c 0.878104061324986 2.12346670334741 -1.02258163341894 -0.143332110493337 -1.22176329265930 -0.0494110689654696 0.57025145741387 -0.402730575121093 0.224693928741693 0 0 0 0 -0.297885186153305 0.727498906617956 -2.3364824722772 -0.076712844574943 0 -0.0277022893680619 -0.266208117709386 -0.348979087597782 -1.97446293967 0.755770905364399 0.329769738039065 -0.526800005921277 -0.198530235863368 2.18733499633257 1.36432742623710 0 1.07155136235510 0.33974456005083 1.70448634127188 -0.117306232665181 -0.645353121899514
Rv2843 1.0640259337232 0.912534235365514 -1.46475053219758 -0.597535139131219 -1.90053787773978 0.0323773308940629 -2.50892670284626 -0.546596164678652 -0.645616177471436 0.00396465139972852 -0.169559963214456 -1.30831367350651 -0.443997286560529 0.616543453836729 1.18058188254461 -2.95270166412311 0.245471259763498 0.134921508726588 1.09737271972826 0.468103344504688 0.325126545736923 -1.32050138997786 -0.0827031695237095 -0.195912539804229 -0.0887561914348409 0.477545385763956 1.28598214860897 1.27773133186911 -0.467878986768305 0.913015680558478 0.171301013140989 1.72130023396006 0.152341457871558 0.213304091818022
Rv2986c 0.553466723755065 1.09177072171968 -0.250832743571805 -0.598958529689534 -2.01296642673866 0.465810206965418 -1.36710647187647 0.300101001436139 -0.575331032395864 0.282199986316594 -1.26431965429896 -0.356044995188839 -0.604630603735976 -0.489993981272361 0.425205376146994 -1.51763630064927 0.224745888969921 -0.224279125068984 0.316503278823435 0.111869225492032 0.199021447937451 -0.578124293440252 0.800824593587234 0.233093364737387 -0.104509255744788 0.139105458742455 2.14430595940704 1.25920166066436 0.0569174464431407 -0.0434337347688476 0.163034713889958 -0.0227661472053234 -0.326440305857753 0.414713399257325
Rv2999 0.555091701087446 2.18873203414298 -0.648003286883108 -1.33112882004497 -0.949164046135946 0.480383284144972 -2.26389926552055 -1.15793040448455 -0.0547582018190662 0.0907813483504466 -2.21746822162100 -1.58656496920392 0.00360595763667839 0.397158555474262 0 -2.22853832983666 0.156604459652362 -1.07147679937582 1.53326652422636 -0.391880420618625 -0.129182942236490 -1.94926552185081 -0.259665284570734 -0.317117172029651 -0.499614822286601 -0.0309787312648302 1.84080430615021 1.09153621221755 -0.74687349080526 -0.0530441140329855 0.245188817545492 0.108949155646447 -0.385203405297509 -0.326778574053173
Rv3194c 0.565366859648926 1.87767752505861 -1.29035590632896 -0.765002309086313 -1.95965523467982 0.555216879282258 -1.93965436745244 -0.707115522893864 -0.238507756270359 0.61797973167784 -1.21418115900787 -0.92834579982119 -0.964795682032975 -0.469607670862073 0.029736546657354 -2.75319153710716 0.143533333198435 -0.113346195014173 0.0776848657183194 0.275147932301821 0.191178452163316 -1.02227212860116 0.661536995786585 0.486034477211844 -0.666247520827829 0.116795932562874 2.94454889487139 2.1954290909492 -0.477130174348366 -0.0321003655906625 0.314353368654192 1.62873494100174 -0.970659160810817 0.426339450591496
Rv3674c 0.446909720624144 1.29574866682237 -0.854000666881298 0.0227447564687248 -2.13931011424416 0.101482710151859 -0.868092388239865 -0.345146180928217 -0.185135168989625 0.0113731280880883 -0.0700687393628185 -1.04060389689610 -0.310825470827356 -0.659878070965428 0.380288527285855 -1.81131361241577 0.507455209174049 -0.666277205126582 0.593968090435545 -0.060115579948061 -0.389134433589469 -0.542549422494482 1.15557185100760 -0.0211216119052198 -0.941352766124385 -0.713918727057923 1.63025366052996 2.96353906006531 0.569239271864848 0.744320710628544 0 2.83085493411944 -0.868041233184781 0.266220134320735
Rv3739c 0.261709873816030 1.48164425732322 -1.45425794021674 -0.765038981692335 -1.33837871873512 0.644113177789837 -3.2772181896225 -0.642828989887099 -1.03652528651774 0.0415685358347016 -1.05866409100766 -1.98410406019716 -0.366883089982286 -0.320608847798541 1.11835513112050 -1.50470911999882 -0.925978169289726 -0.00167042407049837 2.79238440519156 -0.582967563729759 -0.68776356879437 -1.12091717254948 0.102649979627201 0.151472272725871 -0.737085050209678 -0.275256274010034 2.02694812334436 2.74270725641540 0.0376590195534282 0.218801422787698 0.30194936441439 0.574752700707762 0.764566516962013 -0.513268392071225
Rv3893c 0.533426096930633 1.86207501405507 -1.94880437403450 0 -1.72302867833195 0.701306891886896 -2.4116727481758 -0.684137148507624 -0.46156640580855 0.201673310526855 -0.337786111990762 -1.22009880088948 -0.076685859695534 -0.425922570769516 2.19358415381206 -2.0539561624849 -0.787063119020513 -0.535839702208457 0.578883105864214 -0.439014013951112 -0.261167330780064 -1.20068986092399 -0.486864553645599 -0.734227428431217 -0.891030547215705 0.143095620491906 1.58276774473499 3.04695762651386 -0.416513976917029 0.654197515639262 -0.0263465671685230 1.07168743120344 0.4524718120327 -0.483241477851741
[+] Show/hide bicluster #116 motif PSSM #1. bicluster 116 motif PSSM #1 Mycobacterium tuberculosis H37Rv 14x4
POSITION A C G T
1 0.125 0.125 0.25 0.5
2 0 0.125 0.25 0.625
3 0.0625 0.125 0.4375 0.375
4 0.25 0.375 0.375 0
5 0.125 0.125 0.0625 0.6875
6 0 0.9375 0.0625 0
7 0.1875 0.125 0.6875 0
8 0.1875 0 0.75 0.0625
9 0.0625 0.1875 0.0625 0.6875
10 0 0.125 0.875 0
11 0.5625 0.0625 0 0.375
12 0.125 0 0.875 0
13 0.75 0 0.125 0.125
14 0 0 0 1 [+] Show/hide bicluster #116 motif PSSM #2. bicluster 116 motif PSSM #2 Mycobacterium tuberculosis H37Rv 13x4
POSITION A C G T
1 0.6 0 0.4 0
2 0 0 1 0
3 1 0 0 0
4 0 0.8 0.2 0
5 0.2 0.4 0.2 0.2
6 1 0 0 0
7 0 1 0 0
8 0.4 0 0 0.6
9 0 0 1 0
10 0.6 0.2 0.2 0
11 0 0 0 1
12 0 0 0 1
13 0 0.2 0 0.8 |