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[+] Show/hide bicluster #113 rows and columns.
bicluster 113
Mycobacterium tuberculosis H37Rv
18x37
[+] Show/hide bicluster #113 rows (genes).
bicluster 113 genes
Mycobacterium tuberculosis H37Rv
18
[+] Show/hide bicluster #113 rows (short gene names).
bicluster 113 short names
Mycobacterium tuberculosis H37Rv
18
short_name
[+] Show/hide bicluster #113 rows (long gene names).
bicluster 113 long names
Mycobacterium tuberculosis H37Rv
18
long_name
[+] Show/hide bicluster #113 rows (NCBI RefSeq gene IDs).
bicluster 113 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #113 gene upstream sequences.
bicluster 113 upstream sequences
Mycobacterium tuberculosis H37Rv
18
upstream
[+] Show/hide bicluster #113 columns (arrays; conditions).
bicluster 113 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #113 ratios.
bicluster 113 ratios
Mycobacterium tuberculosis H37Rv
18x37
GENES Amikacin Ascididemin_Natural_product BZA Cap Clofazimine Clotrimazole CPZ Dipyridyl Econazole Eta GSNO_CFZ GSNO_CPZ GSNO_KCN GSNO_menadione H2O2 Levo menadione Nam NaN3 PA_1 PA_21 Palmitate pH4_8 PZA Rox SM starvation TLM TRZ Valinomycin Verapamil X_111895 X_121940 X_124196 X_241 X_59 ZnSO4
Rv0423c -2.44464869576516 0.795191713664454 -0.471186375144497 -1.91368059758155 1.39486024344193 0.474873527134461 0.831080692800101 0.150489524514166 0.472303811889339 -0.171145403157083 0.724935054861268 1.36690775226971 0.33645444355213 1.21647870734246 -0.919046510634616 -0.784353294116455 0.923681044296778 -0.652434602144339 1.10938963618357 0.442635598969604 0.487539451041596 -0.00890849607899099 0.189805272623692 -0.45960928726632 -3.3873576077473 -0.452961268163462 -0.442100868244400 0 0.91224169780506 -0.99841311300455 0.402600223509173 0.845707193095742 -0.468661653456602 0.0728929864913112 0.152819566751686 -0.31277259946026 1.30419684991794
Rv0868c -2.17562750295368 0.495659141570603 -0.90647885809318 -2.07802398504093 0.366012645444187 0.0258162972070963 0.915741866821116 -0.0558750587659301 0.328739118775335 0.917800190421467 1.90260440927687 1.25881442725048 0.000583164031459319 0.754661843548236 -0.438161886289677 -0.537701120290682 0.254688007994494 -0.626920269297096 0.479689358031085 0.128830070888669 0.422727058422055 0.144640785974233 0.54312368933841 -0.656277219181244 -1.52497017140417 -1.19952976949375 -0.0897534472125292 0.188692025345539 -0.903711868708381 -2.90008690373943 -0.0560041064278441 0.320578873808345 -0.181018087061260 0.131047411922702 0.131592851101004 -0.461948177307099 0.354020002287635
Rv1083 -2.00090384564982 0.151480056891075 -1.51991016217682 -3.22229106411235 0.8819102131747 0 1.75057043738473 -0.561257283884185 0.41835752671488 0.433829282802236 0.0326484412946091 1.18597184984701 0.58238021254242 0.419921514027416 -0.955295898597403 -0.843724577811108 0.342354065631836 -1.45015158014291 1.07400040789008 -0.271230775316314 0.138239194837693 -0.84397130881747 -0.357390407941141 -1.5369525369084 -2.46289322937967 -0.644963580663629 -1.31362118816061 0.449714729694016 0.632408242638059 -2.23629611225174 -0.0393309471344822 0.253272492046471 -0.984673722920521 -0.0498532688819912 1.05447214945794 0.552680394231296 0.647310618689567
Rv1248c -2.32351068506038 0.299826570266123 0.382401657086517 -3.37447388546232 0.704350807805593 0.651633957020703 1.57003395806879 0.259284033217275 0.909430543222781 -0.241901099566139 0.968959114950358 2.14978285343917 0.350106395709361 0.296157721733139 -1.06666926528346 -0.563611071088505 0.311052247733398 -0.128938799147350 0.227504171114169 0.408966050490797 0.4454159724911 0.359348276170165 0.0768775511367079 -0.714844619642558 -3.91905695161985 0.230281135659857 0.124825055960046 -0.179040004854221 0.146968972680781 -2.22435995569061 0.625618505742946 0.693127896872071 -0.63175363209105 0.506837017617372 -0.156406354454344 -0.180300934463566 0.442660742214311
Rv1843c -2.19426456024049 0.431740181220824 -1.06215588276001 -2.74931020794412 1.56593165245824 0.550928108802614 1.37421721021588 0 0.793067565546918 1.09665586596599 0.993834440216616 1.54585712232936 0.827956077932526 0.306440288627523 -0.459497720744439 -0.947557136157459 0.436481674754598 -0.82720032885076 0.245107845130734 -0.0588526567278666 -0.0369684556467443 -0.242895323078892 -0.437573367971132 -0.868399457573134 -4.3748535993796 -0.70053979694114 0.611618167344386 0.190812326348690 0.653502326897785 -1.64393163473247 0.139635687104546 0.467298999532055 -0.472293957239563 -0.334204837137807 0.892088723733501 0.477001932403438 0.255441800817141
Rv2260 -2.03960672115682 0.262441039317097 -0.112815725262773 -1.92840634622045 0.715217740092872 0.809299129486438 0.317416632840768 -0.107232768707052 0.949311901249308 0.134972411758356 0.367088212202467 0.659086901352033 1.29389598487237 0.749962851608712 0.243903089365662 0.256187543339946 0.773427413939841 -0.19306624640293 0.812115485894265 0.486935052405066 0.454357077491584 -0.170040008033416 -0.174207902640490 -0.105339731562803 -3.36173100411874 -0.777482158395811 0.162561382554038 0.410942042313874 -0.277585221088175 -2.26939867192286 0.230146720713928 0.127373057987777 -0.396434617944464 -0.0073352412282669 -0.293035169682965 0.397466636305844 0.854049175414592
Rv2507 -2.34266274273456 0.215921465435051 -0.0172644358516038 -2.09762543566973 1.10214697007197 0.585211508465235 1.89578761934985 -0.444775227053622 0.72941463762534 0.167765171669446 1.08234079839583 2.47394174678671 0.473830382507611 0 0.113899318503283 -0.986076072928442 0.232510998480661 -0.122066656718268 0.224748197465205 0.618585382584386 0.0947541199163209 0.150159699677626 0.146538657243650 -0.307506953485504 -3.58889533131874 -0.853182249327969 0.450565694572371 0.667936679194444 0.611031768112376 -2.91610402033199 0.315725322486619 0.461300696063212 -0.881984233705013 0.309385257437055 0.435767878982622 0.171462517795661 0.857355005542547
Rv2586c -2.34918564070149 0.616100258818927 -0.64175829926054 -2.21839045108195 1.49096036512623 0.87879470440096 1.65920813436055 0.131541270478688 0.884023453062208 -0.348995479744548 1.18942122680307 1.83204968817023 0.589802833676444 0.347402452774535 -0.472022695717166 -0.132792507571362 0.700221969745141 -0.592752233810894 0.848158916129677 0.622405420568512 0.443590333242033 -0.206017573466679 -0.813252493122498 -0.469517498592777 -2.77229802987784 -0.607819328505925 -1.6528850615751 0.478123190982572 -0.311888700073 -1.25619159787746 0.66140921994172 0.592296121548699 -0.0390572040415416 0.438253882022467 0.351865220042118 0.907590460511845 0.926265957630731
Rv2587c -1.85537777333057 0.325303018379765 -0.285098688021840 -2.42554729451736 0.528909621036904 0.630563360756846 1.34962832462670 -0.252636531465397 0.5683665692618 0.304968453475279 0.286314645150713 1.58128590654349 0.785198047927922 -0.00497872350385825 0.0877157021399065 8.05669694323429e-05 -0.178027584398852 -0.344841397785324 0.172105197444906 0.28896138600456 0.0457247309268963 -0.282121765533454 -0.76551396361092 -0.276622533984114 -3.13044023105457 -0.438032855488493 -0.782465399717976 0.443021620620688 -0.042328368134168 -2.24642242911951 0.32249572340686 0.189480237813213 -0.662431526621832 0.138227194799223 0.80525101181446 0.546570654726090 0.418783032699867
Rv3044 -2.49120921965556 0.431373981966312 -0.258242977643946 -2.30672911570987 0.89196783087412 0.765094935812323 0.873478490216113 -0.339576059072966 0.746853154699356 0.942264283033405 0.658661511350818 1.03744641862329 0.44803816222467 0.276190521534963 -0.794891174614807 0.300278737321158 0.28099637119992 -0.209161484615666 0.493861954432166 0.771367509949087 0 -0.0953603785455122 -0.492845197066505 -0.316884371321687 -2.64310666190533 -0.452462458645215 -0.282173375208185 0.663152213376021 -0.401010819783182 -3.09794418458612 0.480114676576725 0.225797356873316 -0.136920446497836 0.0691089953255373 -0.0234384161808378 0.577503122287237 0.728585533526668
Rv3283 -2.44481411770582 0.184528935178814 -0.705657512863004 -2.52926711306379 0.508352938015038 0.278570717166189 1.20283147278294 -0.250700821021998 0.440252200996353 0.96020258413304 0.650966852722495 1.57353250477641 0.606313114406198 0.604990875285567 -1.22760114202102 -0.720870568306173 0.422181867918415 -0.981286361511659 0.56060733356681 0.536709984476191 0.287247870111923 -0.325996405699438 -0.187161605388519 -1.59874084490157 -3.16850629031489 -0.488125728545669 -0.626045733325185 0.476384944091584 0.213823301284951 -2.61860588181825 0.315752363289892 0.0901307395222157 -0.95060735198371 0.394843517607467 0.544634011892676 -0.0756933538396763 0.497688557623452
Rv3318 -2.13353090354013 0.0437646930551277 -0.995520611848545 -3.14986802755066 0.087616339760829 0.462931414878289 0.446096960919807 0.0329609176666087 0.566649694872452 0.996884521870926 0.565613758019369 0.583690082765450 -0.124971709771082 0.463676320010999 -0.872567557882464 -0.719837382261174 -0.179750202136038 0 0.79937046719671 0.719176608397182 0.67070248467735 -0.156571866186460 -0.159796429232947 -0.882081192289721 -3.34701912467735 -0.823535241418087 -0.441542227395572 0.524717732110679 -0.695172130537294 -2.94973288972182 0.167306450839523 -0.0927737549147267 -1.24991382316594 0.251639746941577 0.267905046282464 0.262222282255704 0.917208778246614
Rv3719 -2.10395113785111 -0.0758571767406346 -0.793227195593093 -1.7301342915566 0.91315047039273 0.250244659738450 0.780667068316546 -0.299853515524156 0.997109900678395 -0.0970317495097215 0.694949874481324 1.48898095006678 -0.137200110209294 0.341914541855634 -0.914381942141235 0.0510171503559843 0.0959881827083134 -0.447254307959783 -0.0425185406820901 -0.301137345927343 -0.196328797369984 0.107091380764934 -1.22839929988671 -1.30254461679041 -3.67670765080559 -0.433237179765512 -0.399528094025766 0.0184336793814251 0.524376635151918 -1.94975921131167 0.448554518634537 0.375171471317528 -0.730720300808562 0.0312952498838278 0.423852176634847 0.243415820083675 1.05257532261154
Rv3720 -2.29588547314691 0.228848085962449 -0.851707107026922 -2.35080529804714 0.43033100849032 0.384796453703942 1.303595978815 0.0996198140333091 0.427965487840224 -0.183923577982913 0.483143190293743 1.55963860194029 2.04653368091736 1.21127855509722 -0.992909255998403 -0.0623094617887922 1.0938133361025 -1.19904183654143 0.56273526379469 0.95696514756071 0.670412249055279 -0.0522669560526991 -0.344221863887281 -1.32456384184169 -3.04033189777859 -0.592177118851513 0.574476519799987 0.0446924248912191 0.0398065544132559 -3.14390555374621 0.175253441841792 0.219580664288377 -0.499287982765184 0 -0.630058599607752 -0.396519161660839 0.409248548258834
Rv3870 -2.43563995220825 -0.188224418201427 -0.211493033390841 -3.07669390900578 0.156940231164443 -0.0952171269349916 0.91472928316176 0.207713972919935 0.0898791082583853 0.0665104435502835 0.694408824316592 1.22363382057953 1.03114244114792 0.413659703034548 -0.353471096992329 -0.582667925016766 -0.360136270596217 -0.0820804690058228 -0.0335098333720533 0.105339956776275 0 -0.451295220222368 -0.38909906761269 -0.326163861095538 -3.49775420236622 -1.12722452050601 -0.181999089932052 0.081935993710757 0.730200006367131 -1.47827388185908 0.381267870274182 0.0795370577761708 -0.404808996578358 0.108771794165107 0.31344155482402 -0.0672832517879482 0.0708533399102059
Rv3877 -1.89471587093018 -0.0211395350814019 -1.62400544777646 -1.97095180553859 0.684194270775013 -0.0206525050219717 1.14687803945749 -0.194770868734566 0.230502932734176 0.712023747838266 0.898485869786426 1.26196915817303 0.269424705019141 -0.868602112673737 -1.03392341442679 -0.472376285760647 0.0437052009870336 -1.41158764995767 0.815408663768362 0 0.0861178983045633 0.118674839947230 -1.03054151323771 -1.59661821242938 -2.3767151610043 -0.976302532379274 -0.288578209008525 0.162838628040803 0.673636458380218 -1.79249567396024 0.825102899938425 0.0663647407482268 -0.502175420490782 0.175926301145747 0.82918710791756 0.380704687839777 1.18095026023968
Rv3888c -1.80961591619678 0.402663469975173 -0.301885028941568 -1.96537478710586 0.100745400760445 0.244228238935632 1.11311642442194 0.427064495103362 0.0246690447591843 0.696735126617892 1.05485468520259 1.34947875041863 -0.358023673189323 -0.479612416803159 -0.0283207567061645 -0.213640361246461 -0.141724727553180 0.0243208293759955 -0.155629605406467 0.78666110370527 1.40692915676831 -0.435060495765198 -0.735298105809251 -1.36233918704103 -3.29701215403568 0.0501740406307972 -0.039613915453409 1.08439548062821 -0.611378746968917 -2.17094583389665 -0.110966249336508 0.634688083746533 -0.0645289937239939 0.168535065589970 1.29956586273392 0.555627139375264 0.551596186593478
Rv3910 -2.33356399022051 0.308516247528144 -0.90655106523113 -1.62322278973990 0.897351735490968 0.41600752886383 1.36222648692406 -0.128988675254281 0.336955800903473 0.970458865213705 -0.274073439007104 1.68949718936650 -0.0142685680990094 0.181195236108556 -1.10472537165154 -0.80941451508145 0.07405610579704 -0.76670940818701 -0.00663988191594681 0.47489300674858 0.166814550565812 0.456795356325004 -0.173318312010890 -0.577262164971226 -2.62477358970607 0 -0.127835075055774 0.425452490059648 0.609206097435529 -2.33524505255576 0.954780774194359 0.320253887736287 -0.214056704994462 0.377791991800508 0.194933469781744 0.490209251113569 1.15994148369180
[+] Show/hide bicluster #113 motif PSSM #1. bicluster 113 motif PSSM #1 Mycobacterium tuberculosis H37Rv 9x4
POSITION A C G T
1 0 0 0 1
2 1 0 0 0
3 0 0 1 0
4 1 0 0 0
5 1 0 0 0
6 1 0 0 0
7 0.5 0 0 0.5
8 0 1 0 0
9 0 0 0 1 [+] Show/hide bicluster #113 motif PSSM #2. bicluster 113 motif PSSM #2 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 0 0 0 1
2 0 0.222222 0 0.777778
3 0 0 1 0
4 0 0.111111 0 0.888889
5 0.333333 0.666667 0 0
6 0.222222 0 0.555556 0.222222
7 0.888889 0.111111 0 0
8 0.111111 0 0 0.888889 |