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[+] Show/hide bicluster #112 rows and columns.
bicluster 112
Mycobacterium tuberculosis H37Rv
19x39
[+] Show/hide bicluster #112 rows (genes).
bicluster 112 genes
Mycobacterium tuberculosis H37Rv
19
[+] Show/hide bicluster #112 rows (short gene names).
bicluster 112 short names
Mycobacterium tuberculosis H37Rv
19
short_name
[+] Show/hide bicluster #112 rows (long gene names).
bicluster 112 long names
Mycobacterium tuberculosis H37Rv
19
long_name
[+] Show/hide bicluster #112 rows (NCBI RefSeq gene IDs).
bicluster 112 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #112 gene upstream sequences.
bicluster 112 upstream sequences
Mycobacterium tuberculosis H37Rv
19
upstream
[+] Show/hide bicluster #112 columns (arrays; conditions).
bicluster 112 arrays
Mycobacterium tuberculosis H37Rv
39
[+] Show/hide bicluster #112 ratios.
bicluster 112 ratios
Mycobacterium tuberculosis H37Rv
19x39
GENES Amikacin Amp Antimycin ARP4 Cap Cephalexin Clotrimazole DCCD DIPED Dipyridyl DTNB Econazole Eta GSNO GSNO_menadione H2O2 KCN menadione mercaptoethanol methoxatin NaN3 Nigericin NRP_1 PA_1 PA_21 PA824 Palmitate Rox Succinate TLM TRC Valinomycin Verapamil X_109 X_111895 X_121940 X_241 X_59 ZnSO4
Rv0248c -1.37412386877516 0.815416077521577 0.64292739079989 -1.17804987433945 -2.36828721741637 0.828029902824151 0.520453667873037 -1.15022255310206 0.614065414412591 0.034611937425023 0.514814564536716 0.422575904963276 0.305935454056747 0.791602336349704 -0.70216512531813 0.119973953984220 -0.85140761553715 0.252007539022430 0.55586091137479 0.864201512380516 -0.430311223871259 0.115269305419152 -1.63424617562647 0.875761051073851 0.829888973990486 -1.62757548849596 0.135104391108332 -3.48663556416381 0.429359188067458 0.780341643382162 -1.26723073550548 -1.48948986497678 0.212904665037928 0.361541623218154 -0.50882199455326 -0.377231284563190 -0.167650802036054 0.49830156074199 0.472974831066213
Rv0554 -2.24044014981467 0.0709252140182527 0.855786031414847 -1.61423063606817 -2.02346922240899 0.445625931384772 0.0253561624477102 -1.996880013288 0.489329064523311 -0.108714948004896 0.280361958480972 0.256992978434606 0.519127533643804 0.300281013644379 -0.0362243029612767 0.135236697876356 -0.98457709261345 -0.220081016840692 0.530415824610896 0.233492181606108 -0.0586456134181156 0.624418815044054 -0.181961415201563 0.448049582848336 0.266721501794199 -0.8006248634029 0 -2.619075156046 0.327697247153900 -0.0706940196655057 -1.87665104312520 -1.94567384375471 0.0502266198738161 -0.0485550892035886 -0.412638534992456 -0.0131302596892112 -0.408743390537908 0.089171243342115 0.218708840668522
Rv1182 -2.07594993401592 0.108123325910563 0.604657443301949 -1.81756370234155 -2.67576509374658 0.0612451299331689 0.457510884355327 -1.28431041359345 0.703686562467365 0.54790205103446 0.188785713895490 0.467458125542188 -0.180715785933959 0.233338564516926 -0.358601900755423 -0.665983071915711 -1.49336302250266 -1.02856590990629 0.647718929851836 0.0585195796438754 0.123286615482934 0.583159278903418 -1.46183957373960 0.277860545796489 0.444723251246143 -1.2125249868178 0.316980195671581 -2.75108247455967 -0.0921913434789073 1.37700681118492 -1.02726663524885 -1.64092565568098 0.425292787338337 0.0701556137001115 0.477788706981998 0.094944559934356 -0.0558242680605833 0.00069066104441695 1.03741029394358
Rv1215c -1.71829710242287 -0.00141501947697575 0.0971837281810967 -2.25199259504247 -1.71547551682446 0.0109054853009397 0.333619434579133 -1.16221595011636 0.291137693616558 0.0031247591570061 0.337733134981196 0.0746455792329206 -0.136191519552035 0.359892516454433 -0.383194462736292 -1.14626899354673 -0.871088552557467 0.110746493451389 0 0.391878470893379 0.255852065645989 1.62081068912323 -1.89266776346419 0.646423734030445 0.382172620255115 0.284323465274350 0.513584476723058 -3.70891087216995 0.819989046907801 0.334500740024332 -1.18828368985001 -2.36142392104459 -0.00412220227814649 0.119479361787895 0.215112601156430 -0.681091460526916 -0.361976638431213 0.0187114766269129 0.807301954387634
Rv1437 -1.8776982729778 0.60655502948381 0.469709082156973 -1.46194671652248 -2.59453132795568 0.30786539152895 0.816361549419337 -2.39391203525825 0.352143412240376 -0.366413618633075 0.661687374115266 0.574344040159472 0.619241362366234 0.82458174555326 -0.458013479616532 -0.771059484902661 -0.366763617528661 0.0626451458919717 0.307949209136943 0.878097259872972 0.844960143963929 0.450346918535372 -1.34093217187413 0.828712102948864 0.579347659978547 -0.190685509746368 1.0266410185405 -2.41399477772529 1.17687583071686 0.369989593237587 -0.682946772007507 -2.92919117161617 0.212451901339908 0.0335112207620367 -0.607621095765968 -0.505548364825656 -0.320168546582848 0.380501798193426 0.814281820067383
Rv1676 -2.06904588418066 -0.137816561902439 0.114546629436438 0.306709264871208 -2.04494632518279 0.105433119618905 1.05709918421547 -1.88966011413591 0 -0.262556542462686 0.328075267440526 0.666720874827421 0.0468919189794299 0.0644253448591062 -0.196906252348022 0.304271441928727 -0.703641125435012 -0.301050840900915 0.715058418897784 -0.176683140059899 0.987397501900023 0.69671724534195 -0.235527998686536 0.975009049372414 0.667809726659815 0.0271986453934323 -0.240376780333087 -4.0385241811661 0.621279943678825 -0.128770587791952 -1.03085804564263 -1.62244563618190 0.648392765018292 0.687853651557714 0.166667460159012 -0.520268936012242 0.49468728304595 0.40825986749573 0.673530057425662
Rv1677 -1.84513231732394 0.471309801248229 -0.256536501593832 -1.56517629222164 -1.90553939698301 0.491162321337433 0.958874154787446 -1.37600038592328 0.275895515119986 -0.762651943515644 0 0.717910522689393 0.860903767087553 0.0722342281004865 -0.64469859525274 -0.935944078116307 -1.09159822174729 0.0785763551949926 0.568847193827105 -0.442945360098103 1.55847310711560 0.425212069373879 -0.376757047766345 0.92034626078585 1.08181578081807 -0.540505241353308 0.157879870314693 -3.30106841044016 0.629982786652783 0.110507092387937 -1.77276947998325 -2.30362931280951 0.272544264081142 0.132088445648595 -0.506248468420397 -0.86235776528572 -0.0332426437095324 0.0826886459023915 1.38338738876866
Rv1871c -1.76349072731762 0.801559597766961 0.115071681267855 -1.02869630538250 -2.13787275098075 0.0239888907799516 0.469867234746402 -1.95633106242705 0.107725424516024 0 0.158818813222736 0.486414067671006 0.828202542045045 0.127501998062338 -0.619359240261618 -1.64842550491156 -1.10838170140384 -0.712327158908036 0.121676911113588 0.168167089262111 -0.556406701012594 0.692120649052773 -0.494113882672328 -0.0274253437392156 -0.306339810615061 -0.0591273455504203 0.47311902332723 -3.19037198081574 0.375200073519327 0.316111079603994 -1.79799335199917 -2.80841873754760 0.181763644866996 0.0614149496232873 0.0218662846865064 0.0209917897541604 -0.119719025353682 0.209207734681024 0.0946361976272546
Rv1872c -1.99898491573229 0.589033303505410 0.370813174784970 -1.32050355844918 -1.45113366304589 0.0954414570520605 0.414140600932096 -2.87036225376871 -0.226191871427048 0.23907176977624 0.157540874248398 0.210080828722319 0.202003502264017 0.0267901810400877 -0.374790235685332 -1.78579704275237 -0.78455323278133 -0.506023324144919 0.311310585603399 -0.0758566396616021 0.0716338041886088 0.859953140058636 0.0270263449308086 0.151985945442990 -0.250766228653021 -0.0184136890950484 0.098535874467297 -3.13096467814997 -0.070704481058111 0.0625560044966274 -2.09896121367859 -1.62402953817745 0.467122279530002 -0.217137221701729 0.226820186050548 0.169926350108934 -0.395248980185884 0.381662478523541 0.965247854944701
Rv2062c -1.78231452980764 0.414791116497345 0.828936220251498 -0.836452643269788 -1.79393935140472 0.371779337490227 0.472678301631528 -2.11016684949305 -0.141431465455337 -0.283903501438204 0.318056023166985 0.558362844803877 0.133839735965107 1.03322888213068 -0.0138478748073756 -0.626187006883871 -1.43958524608753 0.173706374329315 0.225013347690467 0.626307807451913 1.56412964749714 -0.123012369190411 -1.37190629901818 0.892217346912825 0.66840841008225 -0.154449814896768 0.612198773266937 -2.62316263609521 0.76628007115892 0.291948969814322 -1.08476000144765 -0.905832046514977 0.169252907194365 -0.171158501940566 -0.741450107452015 0.0358412491183468 -0.707551304552251 -0.262623029535414 1.75845644841252
Rv3153 -2.56690773629996 0.63259182406622 0.673797459388413 0.0406037585557888 -2.69152349397317 0.582283039800719 0.719246371675915 -1.05903609079797 1.24474748235287 -0.607907835723284 0.669821881735617 0.307947638541362 -0.525744214334655 0.706907616393414 -0.127102275259159 -0.373377286392583 -0.297158959532451 -0.90035954471215 0.764485878091435 0.668307748163026 0.322595443913578 -0.260210141743453 -1.13574395134091 0.534425508378025 0.896298004190589 0.027729198967034 0.947420385992498 -2.91924943282312 1.06167334903203 -0.195801816621235 -1.32869468291481 -2.06265311724561 0.437655579198648 0.147472285474071 -0.539030802808404 -0.268138384260584 -0.351770800243664 0.468906033298278 0.356122013566528
Rv3254 -2.50939782774075 0.322081673777181 0.406069563042782 0.0405239696119525 -1.75779805876277 0.334162004849033 0.800824381069214 -1.57877952846702 0.403802206196347 0.304637017911086 0.669148191809509 0.73380571607897 -0.0846768903840949 0.49413469225043 0.0736255766143318 -0.920199740060384 -0.682546083719615 0.0841458373358006 0.759472166166446 1.11160100002047 -0.380033742548557 0.145544620033229 -1.02524802994893 0.205128371085841 -0.320190049702666 -0.82330225328535 1.07253005268045 -2.31291732704004 1.20997751940957 -0.117368387077177 -0.760607348479816 -0.758077089156713 1.12954393162224 0.401510445654839 0 -0.471386657139902 0.401474474315015 0.422294806972758 0.932423109817432
Rv3281 -1.7144213250611 0.782721318531471 0.304546048833695 -1.35662264094512 -2.39899078967709 0.461701889149154 0.523870514525984 -1.05265254268873 1.14713669395595 -0.170879440922258 0.64466872995699 0.328570877256367 0.676543236116443 0.847876029406202 0.171770566802954 -0.600165643064419 -0.687303858958141 -0.122448898746609 1.10923881467532 0.722058333114956 0.40083809836284 0.913038082806741 -0.411018697325664 0.57952659558777 0.479012394711857 -0.461508042096545 0.467192214222024 -2.66494096835076 0.684691389885549 0.634769105978761 -1.79148952045370 -2.75819043761033 0.423883163746156 0.200407322766239 -0.207757095624632 -0.388251685100912 -0.156068012274986 0.217398376116429 0.730664486565409
Rv3494c -1.97465767726874 0.385449917726919 0.238774789359387 -1.69206246645165 -2.07334987252751 -0.735788812594627 0.301405617734458 -1.8384310065168 0.537693409662381 0.0274887729636342 0.25303384010155 0.4874552844366 0.458992967501332 0.251181990365237 -0.508192006915003 0.764673376285873 -1.90061618076642 -0.0942297665865272 0 -0.256520136846734 -0.114979645911968 0.663738487311786 -1.92043727351903 0.210739579133677 0.274428074503181 -1.80881449160838 0.058410922239959 -3.2438754168834 -0.101424841033748 0.186816732591367 -0.623602502786135 -1.85359189339939 0.14363376821123 0.551329913616329 -0.146026091817446 -0.475346705268279 0.218129046900322 -0.0204673363368145 -0.152667066435582
Rv3495c -1.12361467904635 0.92868047874318 0.656725189243923 -0.754801288816047 -1.50675635695911 -0.00247690545030651 1.74731085115175 -1.69612443742049 0.712204656233497 0.0379976982462739 0.567636054452893 1.42525886506239 -0.403058509511812 1.0335294296943 -0.569069379678631 -1.01203892779342 -0.366216581241219 -1.02131130506987 0.191777770129601 1.17452848681601 1.21615866646770 0.313618118697941 -0.428847880584696 0.780067947297009 1.06934464929908 -0.730676877664708 1.09607021785212 -2.35544404978838 1.21849096074106 0.192139003513467 -1.65484983280720 -1.65270366188243 0.743434662872159 0.161909819668419 0.282949913329486 0.607580807952197 -0.326308108413349 0.72277440440398 1.84821654206985
Rv3496c -2.69063304053472 0.571936125059108 0.62796272268669 -1.07762604782465 -2.60259346003466 0.0885501380567648 1.3976223641683 -1.14137455799348 -0.0722035359882217 0.35548385359034 0.263590294463748 1.06224955106557 0.564161372567848 0.881798669115848 -0.754503403989822 -0.123710547729597 -0.193933503494787 -0.941693992929163 -0.161325213834202 0.764634754191028 1.01893945116679 0.181386303897405 -1.71915610620152 0.83176052106147 1.14893323780390 -0.41501024847877 1.19043377031192 -3.69583943102223 0.940364109425138 0.0518519971041089 -1.06103205686533 -2.40723691780888 0.0174348508330578 0.184430189929495 0.213444224382342 -0.1982364881422 -0.324524466679620 0.0818314024811457 1.05657140009787
Rv3497c -1.98884431633788 0.231658439125729 0.763793280386402 0.5515067409397 -1.95580742364821 0.00748277918953882 1.26136372524001 -0.878904557660833 -0.110761096904752 -0.178262235998582 0.287918087141994 1.08081179881744 1.08295041637383 0.785417023637702 -0.132684279228536 -0.97163953730754 -0.521085366547443 -0.726035595327855 0.728337181372045 0.352181194081706 1.00458680603388 0 -0.401858848852994 0.968183366940313 1.31042940380078 0.048971468823664 1.71017683404007 -3.11660714846328 1.14218086815098 0.588225558470773 -0.917437947651017 -1.91841874191196 0.484555287672495 0.072075284197583 -0.10574746962759 -0.67077195392946 -0.250818596997431 0.527515018321743 1.26918130305606
Rv3498c -2.0079061632218 0 0.400751508278674 -0.427243895957321 -2.08291774276544 0.0379228785494053 1.16107828368284 -1.59850558072345 0.446528815263625 -0.00526426652209952 0.241656614208606 0.640903870904353 -0.908861842888477 0.328331935757730 -0.575797980286119 0.368169535490977 -0.37459205773295 -0.983600045669983 0.0341783515305453 0.900567445098786 0.716506500035304 -0.174405245224094 -1.33644923831270 0.376626831988416 0.923585679024992 -1.07442616896469 1.53481163734885 -2.80424046058967 2.26415700014117 -0.267436881363411 -1.08568130969511 -3.04512735509592 0.353303990076785 -0.059971875367597 -0.250753552650528 -0.464364081113664 0.0480467828020858 0.156502910263984 0.603220760024515
Rv3499c -0.993591300292123 0.592355919014006 0.726613850747917 -0.628679986035088 -1.40852505994946 0.407231156982238 1.20746809094026 -1.30837559524690 0.427586971247227 0.171977026430087 0.830749574462808 0.89100202182381 -0.384983944287184 1.16848586292009 -0.833224800297659 -0.375584383248914 -1.52831517165699 -0.249223825299300 1.15329434538268 1.47500649759463 -0.00911991659158842 1.13546305151748 -0.640283860884816 0.772200351623042 1.24593617596244 -2.17887813753582 1.45969978560849 -1.74837352959572 1.35691917059497 0.0685367339419073 -1.21028151314854 -1.22703239249419 1.21306855010221 -0.294155035010408 0.0983783646843002 -0.0652430272704596 -0.733512216864208 0 1.05623308337768
[+] Show/hide bicluster #112 motif PSSM #1. bicluster 112 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0 1 0 0
2 0 0.375 0.25 0.375
3 0.125 0 0.5 0.375
4 0 1 0 0
5 1 0 0 0
6 0 0 0.375 0.625
7 0 1 0 0
8 0 0.5 0.5 0
9 0.125 0 0 0.875
10 0.125 0.875 0 0
11 0 0 1 0
12 0.625 0.25 0 0.125
13 0.125 0.75 0 0.125
14 0.125 0.125 0.75 0
15 0.625 0 0.25 0.125 [+] Show/hide bicluster #112 motif PSSM #2. bicluster 112 motif PSSM #2 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0 0 1
2 0 0.6 0.4 0
3 0.2 0.2 0.2 0.4
4 0.3 0.2 0.1 0.4
5 0 0.5 0.4 0.1
6 0.2 0.1 0.4 0.3
7 0 0.3 0.7 0
8 0 0.4 0.3 0.3
9 0.1 0 0 0.9
10 0 0 0.9 0.1
11 0.4 0.2 0.3 0.1
12 0 0.7 0 0.3
13 0.6 0 0.1 0.3
14 0 0 0.5 0.5
15 0.1 0.5 0.4 0
16 0.1 0 0.4 0.5
17 0 0.5 0.3 0.2
18 0.4 0.1 0.4 0.1
19 0.1 0.1 0.1 0.7
20 0 1 0 0
21 0.8 0 0.2 0
22 0.6 0.3 0 0.1
23 0.6 0.3 0.1 0
24 0 0.5 0.5 0 |