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[+] Show/hide bicluster #111 rows and columns.
bicluster 111
Mycobacterium tuberculosis H37Rv
29x35
[+] Show/hide bicluster #111 rows (genes).
bicluster 111 genes
Mycobacterium tuberculosis H37Rv
29
[+] Show/hide bicluster #111 rows (short gene names).
bicluster 111 short names
Mycobacterium tuberculosis H37Rv
29
short_name
[+] Show/hide bicluster #111 rows (long gene names).
bicluster 111 long names
Mycobacterium tuberculosis H37Rv
29
long_name
[+] Show/hide bicluster #111 rows (NCBI RefSeq gene IDs).
bicluster 111 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
40
[+] Show/hide bicluster #111 gene upstream sequences.
bicluster 111 upstream sequences
Mycobacterium tuberculosis H37Rv
24
upstream
[+] Show/hide bicluster #111 columns (arrays; conditions).
bicluster 111 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #111 ratios.
bicluster 111 ratios
Mycobacterium tuberculosis H37Rv
29x35
GENES Antimycin Ascididemin_Natural_product CCCP Cephalexin Cerulenin Clotrimazole CPZ DIPED Dipyridyl DTT EMB Eta GSNO GSNO_CPZ GSNO_menadione KCN menadione methoxatin Oflox PA_1 PA_21 Palmitate pH4_8 pH5_2 Rifp SM TLM X_109 X_111891 X_111895 X_121940 X_124196 X_241 X_59 ZnSO4
ORF01809 0.236033015786577 0.601415436691375 -0.280371889732481 -0.40223320250632 0.351406526199449 -0.174908260023118 -0.583420732954422 -0.03450634948177 0.77429955554495 -0.0833458352738717 0.0684747637144563 0.236441820852876 0.223623085760427 -0.539480800488545 0.150719192709573 -0.942095384919044 0.465847213698553 0.108068511906186 0.417976796766989 -0.582986844469603 -0.279430753357471 0.389861498819232 0.82170970744562 0.671707723747265 -0.0698197256843642 0.343769228797276 0.295580603641630 -0.234165337236949 -0.363375476471141 0.364344031336732 0.898237195092852 -0.541287189210956 -0.657214044255332 -0.312919463782074 0.29922748616287
ORF04431 -0.0483055139297312 -0.227654584706239 -0.529241384729152 0.047758216879788 -0.147733376545695 -0.165698784134516 0.136954889026004 0.66935284695259 -0.290965668605461 -0.0287036330805208 0.406516283722163 -0.0660927518953403 -0.149128078573600 0.308967192188508 0.231858303059421 -1.25232345009000 0.428730227622356 -0.191864124735046 0.746954876791324 -0.149726531286611 -0.0964332642102283 -0.0328083634066292 1.05167321102724 0.363273656562803 0.0145738823449966 0.365041626167524 -0.0237297487502240 0.456673609708592 0 0.110842623149109 1.07290709844247 -0.0402066723609968 0.354483489359603 -0.117341668362587 0.739364239135802
ORF05528 -0.106477242992147 0.138410180405693 -0.867213095524446 -0.0215329192316386 0.048343945455844 -0.301238424386927 -0.317740832391717 -0.430016251319798 0.254853557091573 -0.454312232836823 -0.46732922467235 -0.0114998751919940 -0.094722303232045 -0.0853964591225121 1.64015000758851 -0.327127576699565 1.01582003764213 0.283153593640828 -0.220414722859071 -0.482372460823142 0 -0.0788932385822058 0.296209256156609 0.314151069337985 -0.291949434442583 1.30627587080698 0.0386434420526737 -0.0249666184686317 0.122444839026808 0.309958325334180 -0.327068882172351 0.0114369883929337 -0.457118162156365 -0.186891385005471 0.440536445239918
ORF06004 -0.160385744800818 -0.155010821159864 -1.1046950672517 0.0937969547372056 0.367473636882394 0.0761448043979312 -0.119153817787133 -0.469768624206085 -0.0287067871890186 -0.244202002097976 0.0742333402014438 -0.118904770655767 0.220067739539008 -0.28004652077312 0.821303834742118 0.66116069133611 0.746304996218624 1.38217681868893 0.635191744643076 0.0085923583907887 0.27057084460456 0.853041537096397 -0.310620379232236 -0.680910376111391 -0.651402623085696 0.732546463344286 -0.129365712717508 -0.0399907165425570 0.208096461245769 0.374792848193564 1.42938258954156 -0.0567026478303434 -0.0508054575277127 -0.264679546634576 0.803361199380064
ORFD0232 -0.436717380836831 -0.0521784098810644 -0.506888504221602 0.0200487178373343 0.694222702473233 -0.236151917286202 0.0483435439052053 -0.639853795303981 -0.217406485490906 -0.0568106701022494 0.274511702949802 1.02898406089246 -0.504574657532496 -0.0896415453950581 -0.3905991944199 0.903208866976329 -0.194956121098421 -0.51853565326131 0.0631562387188672 -0.617987258027327 -0.303819794058 0.404179300495364 0.665903689474792 0.232749106423094 -1.15792971935999 0.19780860402484 0.077720733558849 -0.248152846642922 -0.0936762405979219 -0.0102511952237606 0.961111823347946 -0.0757678802863177 0.0747114705705876 0.846195101612069 -0.0806043829305694
Rv0265c 0.540408317382864 -0.414103935797485 -0.151750856684545 -0.189624214001028 0.459248693586065 0.702298826506075 -0.713677079659424 -0.243131800026572 -0.746296563610758 -0.955325904561394 -0.0460365611529808 0.402805932630162 0.869341749253187 -1.02453174989463 0.521468122217509 1.20691479348314 -0.309162556351066 0.195484735355834 -0.249007295252676 0.00158817971758159 0.346472770171246 -0.0246498942081822 0.325827684894409 0.0799450117221405 -0.865681825112961 0.872176653218216 0.44743442122879 -0.0645332114293717 -0.245094225501397 -0.624176705090431 1.06462404257436 -0.107513761831999 -0.613082572149557 -0.357068825376716 0.197675148400464
Rv0474 -0.0145319683440131 0.0572711177511909 0.301244822869131 -0.31615815578919 0.44888599094856 -0.0932706942709447 -0.0234057435732492 0.604355550170808 0.624435828826097 -0.0857160523843702 0.49268501855365 -0.0877019654912543 0.594566472294773 0.503740029121289 1.17915742669483 -0.113791661347335 1.23989367944382 -0.0936222098200065 -0.538616888751338 -0.843399067703129 -0.533245121065297 -0.118055097574029 1.04336561960564 1.02010196056247 -0.838373901449787 1.73216872311239 0.00803729975134371 -0.123258875099227 -0.195058604429346 0.360839340764641 -0.0917365723512095 -0.00489055849141351 -0.331675308750412 -0.240753805398353 1.30902492502779
Rv0502 -0.157337280450786 -0.124023500122724 1.58909198365231 -0.287392342294996 0.0286203562279059 0.183468325520323 0.413245910978944 -1.29583417456758 -0.232932498670079 0.864398462413501 -0.152974931699180 -0.180295080218013 1.29605681293147 0.940664971472647 0.900547804013674 0 0.810888178530302 0.781018141604898 -0.791332390861385 -0.665151002164657 -1.05147254204697 0 0.598366863358382 0.317242417361446 -0.823473520837195 0.868764769373374 -0.379108390686762 -0.273886256618631 -0.219556801442545 0.0308971800694105 -0.331321261514609 -0.349414483528149 -0.105804612347472 0.0559504107684891 0
Rv0749 -0.179823951906252 0.151714240594822 0.478482871377604 -0.224002081123425 0.384603505040275 -0.531622789622529 -0.113282786948342 0.125968408309495 -0.0841227963390178 -0.170030571745981 0.0480344914526495 -0.103782541508158 0.219799753932657 0.395541074883423 0 1.54816829657885 0.513379587797482 -0.096811404321308 -0.225291633246441 -0.192752208580950 -0.0877398541449159 -0.770209269793008 -0.106792939355798 -0.0839612433873135 0.431084934312854 -0.45451854279874 -0.177241933277839 0.203143841914054 -0.219251180707957 0.0665647215652965 0.0408493435599844 -0.0623529615729982 0.240997032206427 0.333778793829737 0.195079895989457
Rv0790c -0.131541912170400 -0.0713603897790992 -0.424386134456349 -0.0114906194686743 0.143223931689574 -0.168922461350756 -0.368757156581167 -0.0226761092910253 0.0323661490634002 -1.54932217301136 -0.246639863661700 0.283583619963199 -0.387541866068763 -0.378592173407644 1.23443722490665 0.900156192790522 0.800937628190493 0.477265274545355 -0.457758259508809 -0.224269188307223 -0.521611167879122 0.335413498403895 0.313591335409854 -0.180473501166178 0.394484992538848 1.02532462628069 0.0727072832426706 0.0211652648538035 -0.0347161345042436 0.00858886141498486 -0.0652593752644882 -0.118020132965264 -0.668992375579422 -0.260952938354732 0.456017818353532
Rv0791c -0.0643137125435532 -0.193852389822845 -0.121267282586446 -0.231078707335911 0.0816337156605755 0.135417829364255 -0.160223099974865 0.0921482972284455 -0.0770331639900228 -0.800791455465427 -0.373532654230793 0.107534521908183 0.464765537854329 -0.492410626487599 2.17235274461947 0.244280066225952 1.33056829500695 0.146367614256036 -0.421781483416325 0.296256549268711 0.304792556279145 -0.116316008905698 -0.106163376041063 -0.0403468417394596 0.290194172409511 1.74339087139611 -0.167614716990949 -0.228348415363478 -0.0863025261631186 0.13538005815139 0.0273394887180634 -0.0639394575425393 0.00575854139495062 -0.239576391368731 0.486341250141169
Rv0792c -0.120203046353512 0.192664788224169 -0.671176850552374 0.00611583383837923 0.134208849299817 -0.0933287848686626 -0.589145655377473 -0.0223638124852019 -0.149868003026967 -0.646063103900642 -0.132732386540922 0.367872936290037 0.513876069204498 0.0087677214931284 1.58118900233141 0.428123821513658 1.38092109508683 0.114298782721272 -0.261614471836284 -0.231368326398218 -0.551044773162677 -0.105195594764298 0.195103342050474 0.186246201611377 0.0306160576948093 1.40367524260371 -0.134248716333006 -0.0958746546107365 -0.108534574482374 0.0951904336270989 -0.0221679529875814 0 -0.0634056158381892 -0.149875775286105 0.474002156312192
Rv0940c -0.280564192951846 0.59657161445622 -0.548116275098987 -0.0781644835799118 -0.50807856514348 -0.188553422989081 -0.449765233210546 0.675318898069338 0 0.452990205905023 -0.0584445669399179 -0.627768353140381 0.307719632595559 -0.84371489549131 0.0399332748240646 0.138944246524507 -0.639375414305746 -0.64299922487405 -0.136349768162292 -0.331479570199745 0.246233504438169 0.392954412108179 0.683071926447878 0.392915767082167 -0.169424424152813 0.468262324022487 -0.369428835059459 -0.530438887329665 -0.28479897739512 -1.33195711165879 -0.149556756144181 -0.341692667975655 -0.470312206283667 -0.963447076442023 0.667076159636241
Rv1015c 0.0610434891077064 -0.759186874840732 0.168348464284111 0.456581400945535 0.660362269463549 -0.302964820524154 -0.453673318096086 0.231106596865525 -0.180156552473990 0 0.108674379936661 0.221612072316410 0 0 0 0 0 0 -0.144113372499855 -0.440600598959103 -0.46586540557684 0 -0.465002721988605 -0.275025976325680 -0.00536654983987009 1.33905852229844 0.307797262031473 -0.0863025497448291 -0.105727632257134 -0.68105890522811 0.554110060294197 -0.349918737721554 -0.419913172037507 -0.380529435549393 0
Rv1168c 0.0306797408292904 1.27358736572724 -1.20820693414646 -0.311027963921107 0.759878175946609 -0.584713401744882 -0.472546960974918 -0.160339133086644 -0.160824968584802 -0.841233418248031 0.303214943199509 -0.386968386998959 0.0848971158732343 -0.834419168080157 -0.0598999052895836 -0.642882159235829 -0.55740539721288 0.778223818425138 0.0477501036204687 0.453474493735672 -0.429199270954855 -0.471234460181133 -0.18106378149567 0.568352789539305 0.107392244276168 1.47277991195840 -0.751579555564326 0 -0.185241401914741 0.453608458579128 0.0678723303909951 -0.211818204954669 -0.199791832147142 -0.125333371680757 0.179219288604684
Rv1285 -0.324320597837871 -0.0829786317955495 -0.298131797811229 -0.154332287624173 0.349259778417328 0.14691234953681 0.184604669812461 -0.1737294445217 -0.115098894816976 -0.0593579477813366 -0.172072419982560 -0.155376428939619 -0.381076412909164 -0.066238253127011 -0.0136006478402801 0.135379106560759 -0.436569851767047 -0.446724152905489 -0.107813040031313 -0.0540135691999035 0.0246081048177274 0 2.19090754927227 0.623503919202891 0.0445749078444812 1.00882638407155 8.64257455181424e-05 -0.118867886780502 -0.346190636374494 0.448307044215931 2.41641895917098 -0.500326773915815 -0.180323026744332 0.260090168210311 0.515643174517632
Rv1288 -0.230224121944489 -0.930446886271832 -0.205380475908552 -0.0964342292343386 0.0119018507095917 -0.0419539325573916 -0.494796639680979 -0.143907514470648 -0.819942223663307 0.290310533223877 -0.106928289019999 -0.627166326295082 -0.160073340335442 -0.330010024114758 -0.214375177349022 1.47206608396354 -0.525467291480527 0.193434606606990 -0.320585390034501 -0.0743424462406952 0.496757357224877 0.605347629382082 0 0.286184332735958 0.747901942452228 1.14951299386894 -0.510952716086808 -0.166520719566900 0.150552513687800 -0.277952707102025 0.261881789235730 -0.330433644448197 0.348897045103246 -0.562158253389887 0.26831033045064
Rv1290c -0.178889074753209 -0.388593755051519 -0.187411053658547 0.407852292350142 0.310898134614587 -0.305755943487393 -0.0611749856976375 -0.641508245044708 -0.461210968452337 -1.08555311412233 -0.250377456380533 -0.389965015333085 -0.227114658493935 -1.03440578181439 -1.16901655206993 0.755990297715561 -0.646344488165204 -0.230522136985110 0.764884594058959 -0.23885635045229 -0.172544272596048 0.815598915871098 2.01660153282376 0 0.118187776313655 1.47401790384462 -0.296152238920178 -0.318575480006169 0.0508722216862110 -0.418889900080495 1.77962411025878 -0.105561132639132 -0.151553904740887 -0.261007177534031 0.249604712883676
Rv1392 -0.22692792086131 0.232949195588932 -0.882371680758486 0.0851102527587761 0.0416085704901238 -0.5649069851001 -0.109690429929585 -0.609551494934279 0.139242783382614 0.726312220278773 -0.189346765574369 -0.0844620980916033 0.228585946917708 -0.198835103770097 0.57077732877997 0.847657064303806 1.74992788125089 0.325252231912229 -0.244270834277229 -0.524777111335793 -0.499457783384168 -0.321797486094134 0.550331329976904 0.989616595073445 -0.715343589403816 0.772003471595208 0.133789009037617 0.0122302855851445 -0.29874458407451 -0.288883852075439 -0.447021560028311 0.00138614927407232 -0.476508696094406 0.259594423023898 -0.110061519691122
Rv2058c -0.443060711609976 0.19609547034182 -0.5338829571241 0.0551566451231531 0.620268914578023 0.297920756118338 0.112614003484969 -0.616355042815815 -0.00852848408549156 -0.329713162616189 -0.261134278987255 -0.216363165392678 0.498393111685561 -0.263505635628492 1.11609366430202 -0.215990951979931 0.427918643614903 0.393324138405949 -0.00764522533737111 -0.00707487962029118 0.216615934467205 -0.0288889244649819 -0.289877613617237 -0.159501489264467 0.250477349218736 0.810882521811378 -0.213005780238417 -0.0116438564092956 0.0435357475203183 0.355908539416576 0.580939479860445 0.0574837579954861 0.171429150051720 0.654701786063927 -0.00023539595740403
Rv2104c -0.378122631028502 -0.334952106433955 -1.22747460715148 -0.278045377661104 0.511279933541769 0.0219988847928226 -0.172149479624748 -0.345903760345822 -0.436729118694278 0.274396900839544 0.0464398399229096 0.469908357627832 0.372263167971364 -0.163991080816057 0.494045068785944 0.492926276971021 0.981698810047338 0.451694623465221 -0.568450374574102 -0.152471487121337 -0.360861635313851 -0.125984498241001 0.602936298912265 -0.679001708356522 0.153157108448582 1.41700390838822 -0.0482989564256679 0.00095460888932686 -0.1208511858738 -0.317655322079549 1.68205211534336 -0.252347992314249 -0.11088915758148 -0.492333340008187 0.22379210612273
Rv2136c 0.0239021491766584 -0.21103380538351 -0.907010576465803 -0.279548890003751 0.0151839764677338 0.454649639546921 0.331665712461177 -0.437068788578896 -0.0885406306870128 -0.779862585634447 -0.00307298942965368 0.301256529525439 0.362080883785651 0.319010287634419 -0.431988928296222 1.55067596874473 0.198244809152764 -0.0222106293462272 -0.369600736091039 -0.545438788863562 -0.573021333222286 -0.129569710965513 0.161655233784176 -0.0563249744511408 0.101347128068104 0.378012688665791 0.121328955526528 0.347049118003168 -0.0445897301563499 -0.206949597307277 0.942058607997804 -0.334306104283828 -0.183381338440737 0.55022743930728 1.17242146826767
Rv2334 -0.117293279941012 -0.476694306096526 -0.608233098585987 0.388710450675236 0.0567909789846883 0.585228223748852 -0.542878082113883 -0.347699696872788 0.304501880649103 -1.33050846139827 -0.697061912628405 -0.117681722348801 0.50103418703864 -1.09042018657636 1.33111259459554 1.70129372950501 0.906568113531947 0.0632292731118667 -0.0252234171065567 0.307844027000595 -0.108582787481693 -0.682814221778477 0.336728998045524 -0.294669374493915 -1.57295528523688 0.81678320101251 -0.69156769235209 -0.316758008494926 0.495115543437033 -0.334862741394296 -0.218620357500187 0.651281628297092 -1.01220585751422 -0.163977240303725 0.200715465546157
Rv2396 -0.388864640612305 -0.186813908204995 -0.582797446620453 -0.456684531922698 -0.0262002036134233 -0.418330925174047 -0.221680214485531 0.713307608444827 -0.159291331457996 0.380919919913574 0.604471616245564 -0.00445978985697919 -0.533085576112691 -0.216604679549346 -0.320143951752550 0.653543318711563 0.094597658410066 -0.244156859395916 -0.0192377873000042 -0.468243158840917 -0.224903626956417 -0.0944855420421322 0.786221483925228 0.328077617911189 0.285216324041811 0.0114381195594140 0.0780417053744261 0 -0.242039697566601 -0.0354788851010777 1.26015375079296 0.0618276798957525 0.215255384095382 0.0953872700093727 -0.372119138751727
Rv2518c -0.0790085801385643 0.285729330161553 -0.53482564283629 0.0690911552744599 1.21855074965205 0.576517153015156 -0.702875983642516 -0.198828660088195 0.279201689499829 0.0535504028439892 -0.0797759058370768 0 0.480727674423535 -0.80560864447954 0.72075932688491 -0.634473700101565 1.49244216863397 1.36393953852425 0.297084172448271 0.530858931209476 -0.0947223000882962 -0.124713913993638 0.406629467653199 0.463235522755692 -1.09374258734224 0.409490880298272 0.166043890828347 -0.00866023902456925 -0.155931176930575 -0.205357412443445 -0.00800337806791946 -0.49237008091941 -0.622156450660296 -0.451320012138962 0.144072577180551
Rv2607 0.193362983880616 -0.249140159715222 0.280688893857900 0.183721609085942 1.10466310512845 -0.478833324278711 -1.09579591076538 0.211531728540678 0.052436747466543 -0.525866888735607 0.520486233644268 0.497583576982675 -0.0772886268959266 -0.93990716865236 -1.14077615580295 0.833788702705355 -0.692480915293039 0.485877692009478 0.321328159223682 0.413428992110364 0.183618086675459 0.203498411699632 -0.680017871402756 -0.229415074134384 0.638451287505673 0.21522573164003 0.294638342418812 -0.0904395383700254 0.254531879358930 -0.539366468019629 0.529580890568489 -0.124377185976927 -0.0105701648975581 -0.0674965939656746 0.154901684843055
Rv2623 -0.100132022502256 0.268287393726549 -0.163872412977311 -0.142943802639862 0.379368010726188 -0.00754333553547636 0.320456914691722 -0.251520307463279 -0.0698258024803127 0.205475468153348 -0.0398306211258892 0.422972596768234 1.51650707583736 0.422088101468398 -0.538348420064860 -0.233489478284108 -0.884096070891759 -0.628105033179561 0.309741600047038 0.0449270664295513 0.336572610551941 1.01001765723981 0.466159659611922 0.696227447847284 0.254003752120189 1.10713986317898 0.138546981039596 -0.0825104038434099 -0.538363946834122 -0.0484459694818108 -0.723270755992146 -0.305148513130500 -0.609865962156602 0.135178308312953 0.152794940728271
Rv3491 0.0710660577831794 0.246489277008909 0.406079558193178 -0.40295969252814 -0.539658287971992 -0.0959370660654353 -0.233751520610516 -0.135346380806565 0.643738171238956 0.627928847956598 -0.339243807971558 0.514884265967335 0.817196351148082 -0.445941226659184 -0.519241926872007 -0.00138725337726350 -0.666208014463735 0.310844528775613 -0.0853508709624233 -0.640739495000573 -0.684088778761082 1.22263241040489 0.422017112677557 0.651646707628845 -0.33321272586339 1.17948281414378 0.0538266609855007 -0.565579281673636 -0.201218076535372 0.836674405132567 0.534822271941357 0.0232988125996485 -0.993836202479156 -0.799477249944663 1.02454109952921
Rv3855 -0.282461127928358 0 -0.303299978596069 -0.385615145388694 -0.142623818890441 -0.29066222566028 -0.262734846285412 -0.335957663843803 0.0197870832467991 0.369798213190878 -0.206615178940997 0.200603533275848 0.00675434012923071 0.0205905911486995 -0.385897601125593 1.49526486873423 0.315827407408901 0.99622872636238 -0.421697710650979 -0.525533810315004 -0.222885492739979 0.0403798018796585 0.98838860930804 -0.256283779154649 -0.969604374495328 0.129774608755882 -0.395815148607031 -0.480121494620977 -0.285414912209110 -0.166928825132196 1.80180822848915 -0.363915986410718 -0.310232084622076 -0.0646639974342704 0.630378804255
[+] Show/hide bicluster #111 motif PSSM #1. bicluster 111 motif PSSM #1 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 1 0 0 0
2 0.333333 0.666667 0 0
3 0 0 0 1
4 0 0 0 1
5 0 1 0 0
6 0 0 1 0
7 0 0 1 0
8 0.333333 0.666667 0 0
9 0 0.333333 0.333333 0.333333
10 1 0 0 0
11 1 0 0 0
12 0 1 0 0
13 0 0 0.666667 0.333333
14 0.666667 0.333333 0 0
15 0 0 0 1
16 0.333333 0.333333 0 0.333333
17 0 0 0 1
18 0.666667 0.333333 0 0
19 0 0 0 1 [+] Show/hide bicluster #111 motif PSSM #2. bicluster 111 motif PSSM #2 Mycobacterium tuberculosis H37Rv 18x4
POSITION A C G T
1 1 0 0 0
2 0 0 0.5 0.5
3 0 0 0 1
4 1 0 0 0
5 0 0 0.5 0.5
6 1 0 0 0
7 1 0 0 0
8 0 0.5 0.5 0
9 1 0 0 0
10 0 1 0 0
11 0 0 1 0
12 0 0 0 1
13 0 0 0 1
14 0 0.5 0 0.5
15 0 0 0 1
16 1 0 0 0
17 1 0 0 0
18 0 0 0 1 |