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[+] Show/hide bicluster #109 rows and columns.
bicluster 109
Mycobacterium tuberculosis H37Rv
17x33
[+] Show/hide bicluster #109 rows (genes).
bicluster 109 genes
Mycobacterium tuberculosis H37Rv
17
[+] Show/hide bicluster #109 rows (short gene names).
bicluster 109 short names
Mycobacterium tuberculosis H37Rv
17
short_name
[+] Show/hide bicluster #109 rows (long gene names).
bicluster 109 long names
Mycobacterium tuberculosis H37Rv
17
long_name
[+] Show/hide bicluster #109 rows (NCBI RefSeq gene IDs).
bicluster 109 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
32
[+] Show/hide bicluster #109 gene upstream sequences.
bicluster 109 upstream sequences
Mycobacterium tuberculosis H37Rv
17
upstream
[+] Show/hide bicluster #109 columns (arrays; conditions).
bicluster 109 arrays
Mycobacterium tuberculosis H37Rv
33
[+] Show/hide bicluster #109 ratios.
bicluster 109 ratios
Mycobacterium tuberculosis H37Rv
17x33
GENES Amikacin Ascididemin_Natural_product Cerulenin Clofazimine Clotrimazole CPZ DCCD Deferoxamine KCN menadione mercaptoethanol methoxatin Mtm Nam Nigericin Novobiocin Oflox PA824 pH4_8 pH5_2 pH5_6 Procept_6776 Procept_6778 PZA Rifp SM Succinate TLM UV Verapamil X_111895 X_241 X5CL_PZA
Rv0064 -0.511615021425794 -0.350777293302901 0.056280502061381 0.78427009861006 0.0936152495326096 0.660797862846199 4.61901555369054 -0.469220909557946 2.3212483535616 0.041771276552052 -0.00986777582553782 -0.0327818070602406 -0.357820756005092 0.585473825106573 1.17108552255600 1.66463955431161 -0.449902943715289 1.41053947793076 0.318750077375647 0.331145588833567 -0.101309664492171 1.64695709305128 -0.0475376725041196 0.0459061312199198 -0.286338304220724 -0.242216757891892 -0.0115816824481812 -0.0905587814248838 -0.566037192745854 0.249362168901037 -0.114871693542966 0.371330505700081 0.358618404014258
Rv1161 0.349902764521773 -0.110187186074681 -0.256033323303141 0.249825220765001 0.184988896288310 -0.210911749980038 4.45962982029834 -0.513758332701542 2.98677063564806 -0.150431917671179 -0.267102888098746 0.136430857606290 -0.519434573763427 -0.313439191823854 -0.296239451973077 0.394220564963051 -0.217863120580727 2.53987443240544 0.567122674860582 -0.312954206397354 -0.00790722163427554 1.77755341945295 0.305184361308053 0.459640192662254 -0.285899135765585 0.638488132147749 -0.520437608286701 0.269866380254749 -0.171166370221900 0.46082870526999 0.107198636145366 0.0157401879847805 0.48399037794271
Rv1576c -0.0499316913184684 0.0139395882039203 0.156519320366091 0.704664568024404 0.0495896955666569 0.119990511839776 4.48874548894636 -0.405190736055687 3.43449760451394 -0.280273569543353 0.08481592637074 -0.0932090685169123 -0.205115272409227 0.0622066444980982 0.0318668231705997 0.845880873656297 -0.436410472133723 1.61823403740489 -0.0318669136896617 0.100013707432653 0.134526555404199 1.55452290610154 0.590399904707932 0.0271051100171722 0.203126964375345 -0.561353993376207 -0.476335980041961 -0.123416577289481 -0.431997954155176 -0.279626454032013 -0.107592016981303 -0.149112330772800 0
Rv1577c -0.0278450183982884 -0.175044595361212 -0.0604822203744598 0.392862709254505 -0.195046225714367 0.204976484438013 4.76802821846908 -0.386854789600422 2.70450011830868 -0.374633286807097 -0.164879508944629 -0.313240086387112 -0.240491912326267 0.0291107917694724 0.572962932814816 1.06365816119437 -0.270644033883625 1.31808636793665 0.208858221049005 -0.123609678526306 -0.460977489443476 1.43664357413307 0.248292124279093 0.0291182778102208 0.0510554402206515 -0.225428665643750 -0.472916857092136 0.168389086756480 -0.257930891672605 -0.476268029713714 -0.121009423628240 0.393234147086641 -0.69232350271496
Rv2005c -0.735077603139978 -0.0176023469003987 -0.427754022055857 0.756349632927235 0.226443588907734 0.799588289525385 3.54458496111001 -0.338835921213241 2.04123574041837 0.0193696984114947 0.0723722082501327 -0.152004174077599 -0.634601897205145 -0.683739360620845 0.272937270427197 0.383312412613429 -0.274570793534638 1.04879048500106 -0.31559649742613 -0.167631059643286 -0.375786294891668 2.26657123087492 0.476348332986563 -0.689878655249003 -0.285040844717675 -0.508965143550822 -0.413732990009833 -0.150275437126270 -0.146136133810863 -0.0170772360020336 0.182610297129561 0.299058656937539 -0.488605921787303
Rv2498c -0.223638052098326 -0.0335703108307411 -0.0700138588866125 0.77220205167701 0.235045963741908 0.671770631745936 4.98280604235374 -0.106594259645152 3.25391173860384 -0.163789646789335 0.00565987462921079 -0.462122424012898 0.0741331429023958 0.0698856642140639 0.399276456616782 0.990310439243338 -0.288630100284609 1.77660936848721 0.256315252620870 0.34818066389192 0.141526561280312 1.10261167296731 0.571696241610171 -0.0807074610854758 -0.638157323562368 -0.219269711369651 -0.944876800090346 0.0517948679015002 -0.0257786576065362 -0.0545809743656208 0.284713847123935 0.483424238820367 -0.0629563814359598
Rv2499c -0.537243909056498 -0.167347827358810 -0.177823929350903 0.507743982306813 0.194277859629344 0.372180138967013 5.05878445872562 -0.0968015157180762 3.42286195852541 -0.131409124928763 0.0874701171851035 0.0377478177538031 -0.467826199349383 -0.000547081903855088 0.81896176493848 1.07027414936235 -0.26523939522627 1.81574521363721 0.165046556762394 0.095964181901269 -0.0126834525996153 0.489742036090097 0.190120838269015 -0.0692530321030955 0.0216108340981708 -0.435042874910097 -0.107105635483675 -0.249146686702865 -0.246571741795690 0.172024495986714 0.197145214090216 -0.0368028466299624 0.359327712601436
Rv2554c -0.701218896056044 0.0459987590779661 -0.195475286540361 0.734422233394623 -0.220725956364607 0.382731019544465 4.06805882436901 -0.46733241799651 2.25856718533035 0.184469190337631 0.0578233921920489 -0.628739834871193 -0.169466973711840 -0.126459082122371 0.209476350131969 0.260564527654924 0.496520461591231 1.53335679397488 -0.439403246080642 0.063306859169192 -0.151533183996830 1.52600872401016 1.15799589311274 -0.366082039118081 -0.73409579713964 -0.464738183617368 -1.2071882734194 0.178460728383378 -0.440715834107639 -0.277150334629618 -0.142734898362491 0.480877505973989 0.283709634053065
Rv2650c 0.292049596055637 -0.0485330038153591 -0.251409219265811 0.162300205871253 -0.190651549087149 0.677618847019967 3.40944941545592 -0.240838693551886 2.15080184138295 0 0.183322158673742 -0.573035181705316 0.0437339670526584 0.237857998738515 0.342666458916073 1.20557377376555 -0.304314105035559 1.52485307299822 0.287587845075918 -0.0407679658284564 -0.347011045720545 1.75926665101224 0.516296035886681 0.725293846360185 -0.152422155676481 -0.0357706579246352 -0.713082708212152 -0.210604770531362 -0.282945215366749 -0.364732821923482 -0.00804833438434235 0.190920721058857 0.439393067568151
Rv2651c -0.229204055930774 -0.128822525528062 0.285518503184204 0.231157252436074 -0.202291566668185 0.560395367630405 4.77371596550822 -0.296304210846734 2.32409614153923 -0.752766356824236 -0.382633448507600 -0.494547351986921 -0.120510084773562 0.337707383376796 0.443776940581408 1.41871586311672 0.288620133553055 1.16144280378896 0.0756419127710647 -0.351508858640756 -0.105303805060215 1.12776620479186 0.243007443766294 0.0842268605739605 -0.200555987095512 0.0683610429420302 0 -0.232411840900906 -0.177999214444578 0.227382318907893 -0.0184530476618155 -0.084095630416669 -0.161220149626327
Rv2658c -0.078314567950801 -0.438148676903428 0.869728011439833 0.162725053087473 -0.320834170944164 -0.0985877129152614 4.58252886410607 -0.135526894482440 2.80857425564085 0.00577773522330465 -0.243991104833566 -0.627579291297471 -0.638270806232821 -0.244268861641000 0.00501789728447318 1.09828870626041 0.113053547149202 2.30874902893454 0.111402017793538 -0.134523711322063 -0.729345364126143 1.92817673536389 -0.220941992502849 -0.45678262887841 -0.116892361644448 -0.00526260917118089 -0.895099409234712 0.0199865745612887 -0.861836795846313 -0.243003695923787 -0.30982034979761 0.100235475756291 0.0520881555694517
Rv2665 0.39226525647325 0.0443861036145885 -0.235575240707792 0.719055482381887 -0.208751535566377 0.233612331620717 2.92256025151259 -0.235786518295941 3.08942899103377 0.140304701583052 -0.330176583920842 -0.189393845663883 -0.467157171877819 0.0927795175223881 -0.451378124786612 1.60556926038758 -0.0330280179990415 1.71548548359894 0.432574266051938 -0.137570995635586 -0.0384538814488737 1.82836617080768 0.420178378009243 -0.0152366355044248 0.0821552820060151 -0.473893441508017 -0.61498500670429 -0.0487640451641644 -0.106699407101272 0.210189112189956 0.055701009567439 -0.170238158047403 -0.331469569289671
Rv2686c -0.599226818291988 0.64452732085556 -0.715747854179948 1.35624365441934 0.573645857167834 1.04059874029324 4.49398857521457 -0.440328847594303 2.54981519300302 0.210820407308888 -0.0380553551212982 0.313866509922133 -0.905931673906338 0 -0.257996401670666 1.34351336871483 -0.766849998366416 1.11307623946296 -0.107632058190777 0.587244436545878 -0.180225861489078 1.21011610262604 0.423834111233644 -0.492527162338665 -0.0458595261218720 -0.435814027350239 0.300766267766335 -0.551968328030284 -0.90081271292783 0.350606162301864 0.445120827659563 0.392088378918631 -0.0447830871897475
Rv2688c 0.671421284138696 0.77697054701802 -0.471541775653488 1.70649639004535 0.112373518089754 1.11923765978858 4.02832818710019 -0.251227153680092 2.45346156776263 -0.26253917653206 -0.109337716477229 -0.193228389716479 -0.562765366050351 -0.00719253710033725 1.23505381403907 0.615804809491956 -0.866619437275555 1.73808234338945 0.178464416540192 -0.374724029193335 -0.207174040173645 1.06820089988182 0.0636193589686058 -0.0218120934668438 -0.952588529568476 -0.191739365354002 -0.147268704512286 -0.603726457431475 -0.560378088732526 0.214552248287651 0.779233576299213 0.276775160698763 0.411426337459238
Rv3606c -0.21048913733242 0.221640595794487 -0.351273348244693 1.52607013015240 0.481772253064011 1.66499599402752 3.72408441982093 0.222646419149175 1.97734476891881 0.703336877920933 -0.41637795551668 -0.311750440507449 0.0381567713687385 -0.00236832778885406 -0.301581735528345 1.64043833630325 -0.455153654141023 1.83084434864429 -0.081450169838944 -0.0616438141505382 0.0367055317821944 1.28641437583970 0.789818673806902 -0.296419838186172 -0.887634905721603 -0.268596126334601 -0.43384796772153 0.0211467123541365 0.0329822458219873 0.127696681326608 0.389796717913809 0.564814829587666 -0.0152487091753225
Rv3607c 0.396768807112698 -0.277775863695959 -0.76489254915522 1.19542153849470 -0.295311657488211 0.884547130475597 4.75953691815657 -0.189827151051860 2.13797322136542 0.924492263379464 -0.370182782683784 -0.867336685940208 -0.0819941835237274 -0.136271895993623 -0.809365560829739 1.18729365031368 -0.0485981017048039 2.55093330820743 -0.189044728912237 -0.2513741352317 -0.501322060964813 1.06951390565411 0.276684415008927 0.204881751665451 0.609737991856855 -0.158547280301478 -1.26208749868074 0.33101350402291 -0.243124330960264 -0.406747508372256 -0.0870377874475352 0.94514502498763 0.609130387943438
Rv3609c -0.152670248552076 0.0960740941239107 0 1.90022537913325 0.215713885328200 1.23248117041179 5.1008708390477 -0.582329558944665 2.86113932913525 0.301361711114577 -0.126182661677373 -0.173027081936270 0.142090541484654 -0.394302470363626 -0.0999577208145152 2.31908734072246 0.543054225379578 1.97426729350453 -0.501322362099536 -0.513074669364074 -0.270413539386382 1.56822840094480 0.558735769136418 -0.461913516029219 0.181891838440733 -0.455280270019024 -0.61598653258756 0.149724220836619 0.538367640159296 0.437744668826278 0.257855985330628 0.593648161853617 -0.00945249756016848
[+] Show/hide bicluster #109 motif PSSM #1. bicluster 109 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0.8 0.2 0
2 0 0.4 0 0.6
3 0.6 0 0.2 0.2
4 0 0.8 0 0.2
5 0.8 0 0 0.2
6 0.8 0 0 0.2
7 0 0.2 0.6 0.2
8 0.2 0.8 0 0
9 0 0.2 0.8 0
10 0.8 0 0 0.2
11 0 0 0 1
12 0 0 0.2 0.8
13 0 1 0 0
14 0 1 0 0
15 0 0 1 0
16 0 1 0 0
17 0 0 0.6 0.4
18 0 0.8 0 0.2
19 0 0.2 0.8 0
20 0 0.6 0 0.4
21 0.4 0 0 0.6
22 0 0.2 0 0.8
23 0 1 0 0
24 0 0.6 0 0.4 [+] Show/hide bicluster #109 motif PSSM #2. bicluster 109 motif PSSM #2 Mycobacterium tuberculosis H37Rv 14x4
POSITION A C G T
1 0 0 0 1
2 0.333333 0.166667 0 0.5
3 0 0 1 0
4 0 0.666667 0.333333 0
5 0.666667 0.166667 0.166667 0
6 0.166667 0 0 0.833333
7 0.166667 0.666667 0 0.166667
8 0 1 0 0
9 0 0 0.333333 0.666667
10 0 0 0 1
11 0 0 0 1
12 0 0.333333 0.166667 0.5
13 0.166667 0.833333 0 0
14 0 1 0 0 |