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[+] Show/hide bicluster #105 rows and columns.
bicluster 105
Mycobacterium tuberculosis H37Rv
8x36
[+] Show/hide bicluster #105 rows (genes).
bicluster 105 genes
Mycobacterium tuberculosis H37Rv
8
[+] Show/hide bicluster #105 rows (short gene names).
bicluster 105 short names
Mycobacterium tuberculosis H37Rv
8
short_name
[+] Show/hide bicluster #105 rows (long gene names).
bicluster 105 long names
Mycobacterium tuberculosis H37Rv
8
long_name
[+] Show/hide bicluster #105 rows (NCBI RefSeq gene IDs).
bicluster 105 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #105 gene upstream sequences.
bicluster 105 upstream sequences
Mycobacterium tuberculosis H37Rv
8
upstream
[+] Show/hide bicluster #105 columns (arrays; conditions).
bicluster 105 arrays
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #105 ratios.
bicluster 105 ratios
Mycobacterium tuberculosis H37Rv
8x36
GENES Antimycin ARP4 CCCP Clofazimine DCCD Deferoxamine DNP DTNB DTT EMB GSNO_CFZ GSNO_KCN GSNO_menadione H2O2 INH menadione methoxatin Min_med__succinate_ Nam NaN3 Novobiocin NRP_1 PA824 pH4_8 pH5_2 pH5_6 Procept_6776 PZA Rif TRC TRZ UV Verapamil X_124196 X5CL_PZA ZnSO4
Rv0433 0.253958059815263 0.0561486569540569 -2.7235886948454 -0.442359316654662 -3.15204525343432 0.668662880052448 -2.15734178772919 0.0516525107313491 -2.20176517539320 0.423873690892206 -0.360927445369222 -1.67897848927685 -0.256097999277014 0.0478174975123708 0.344106029839672 -0.555833743648157 0.180227349568804 -0.238256371010222 0.567467510132598 -0.590801340387955 -0.190740532264954 -0.695697878540455 -1.95633207179058 -0.17311276967315 -0.542198839354611 0 -1.46516214332828 0.124855846446566 -0.373293791447671 -1.36747223003044 -1.76963219383713 0.72289131616945 0.167848453215851 0.9826274358525 0.823412887459279 0.378017990461738
Rv0707 0.310052645334928 -1.39750160010272 -2.82830118600307 -1.63228238997456 -2.62130395645013 0.466855899704410 -2.91342379313591 0.172771206367139 -1.31470426526004 0.338352491325109 -0.709185610280206 -2.34193545483248 -0.536330157557347 0.516142584993539 0.632180585363859 -0.257334247692296 0.182610957210659 -1.30099438086857 0.477445373018706 -0.919498289794079 -0.243339431570404 -1.11479312744584 -2.73966278456798 -0.0318614631826765 0.138407146862192 0.294738828703562 -1.22060500947065 0.631633981046683 0.546962324475057 -0.364578573261684 -1.44424967172241 0.89615773246556 -0.431474679789195 0.520551877888718 0.995709460075196 0.250928830827030
Rv2120c -0.00129301167547147 -2.17345994596671 -2.58340226502477 -0.397824297579296 -2.49923968175102 0.343030542415535 -2.67694656257561 0.0145294095744947 -1.50220787715524 0.233622549515447 -0.531658850335539 -1.26250708044636 -1.40815630373785 0.285568084449006 0.239998295103594 -1.10878406694187 -0.058964132022128 -0.640086047146332 0.096128054820005 -0.505681269688639 -1.53663557240083 -0.759482476403349 -2.75508165552215 0.197685273608153 0.215784022236579 0.102867915997846 -1.32665723708071 0.111078608960910 0.485213570393877 -0.40844946140675 -2.21278393605173 0.377314109251306 -0.319377830413569 0.198133097361052 -0.544422261999412 0.335000699605225
Rv2911 0.64172344873468 -1.19029215659919 -2.48601358661584 -1.30875209423696 -2.80654092938486 0.462348041266041 -2.83048784927903 0.478989994444087 -1.47547280410060 0.481852697058292 -0.150169178674494 -1.85337515407040 -0.37065228714514 -0.171239877651218 1.13000221512824 0.340009905370707 0.327966473947615 -0.290987815225269 0.165978745873491 -0.467057595944811 -1.85351760553954 -0.389022470183228 -2.63816073709508 -0.650075963636163 -0.440754685107578 -0.48602562245550 -1.16443832416950 0.903171254051323 0.49357458559023 -0.780185818548358 -2.02952396351814 0.194747827923501 -0.309322434017133 0.117390730280375 0.196026874991792 0.363026962023825
Rv2953 0.456293825505836 -1.78870690094706 -2.90051003342309 -1.30856943791337 -1.78142066910962 0.455292311910040 -2.11684001708785 0.268765551430055 -2.07196895307448 0.796399412454263 -0.199368629267632 -2.55858443005964 -0.70935230816504 0.130400727290720 0.949891524136087 -0.604553358964292 0.438621676301142 -1.31457479814603 -0.163506560990665 -0.650721128505923 -1.98732519240763 -1.04406708469500 -2.88423410831867 0.0720997598073743 -0.00499904692543334 0.559888071049205 -1.92494061904700 -0.281291191542864 0.242093311291676 -1.3269625720991 -1.51036482291894 0.364385909396712 -0.331002381360009 0.00657447163987359 0.254339698157893 0.526953415669942
Rv3794 0.487013591184317 -0.701882463058522 -3.16099667192 -1.39971490460679 -2.1775342410805 0.730424207886579 -2.87781785174544 0.309841301196871 -1.48680235268675 0.359952654373809 0.332376173046431 -2.24828613353824 -0.225644486986362 0.238346914045239 0.775673318070142 -0.599971286025315 0.638696957418882 -0.885117968360721 0.337146494648104 -0.416061481213101 -1.79448283907841 -0.645549750616884 -2.30332484914628 -0.665246859750301 -0.0466153306421874 0 -1.44400631473066 0.13298070429328 0.00933021840632047 -0.694933927432564 -1.48181379099827 0.457758210571435 -0.316629202874607 0.609422636864887 0.361282026276723 -0.0438833216285308
Rv3795 0.747518175324441 -0.507927070418357 -3.42565744671520 -1.18119400154283 -3.39515347212648 0.626092665727173 -2.98188524743852 0.549424187733093 -1.37484713963306 -0.103553101654781 -0.237409444816563 -2.10102024940719 -0.63893461128237 0.356460618530873 0.380154140761587 -0.153423969234769 0.874217375647725 -0.973769723531716 0.389693713567397 -0.342806228338725 -1.93532004898078 -0.658846251184496 -2.10269835421062 0.113524774930305 0.159371340305231 0.314973938684569 -1.6111462714108 0.600247027498185 0.309504206901574 -0.52584240465754 -1.37841816680639 0.305882292864366 -0.254026009155886 0.256003321738177 0.917535979439677 0.67591855378969
Rv3922c -0.000151834322692570 -0.798889050667562 -3.23367917673756 -0.84774558071213 -2.33858207534473 0.605765606918898 -2.72507125537443 0.148576395486558 -1.99541495257851 0.226268860875929 -0.320153130635199 -2.29887401632478 -0.995811393721507 0.0574261159043557 0.641033310583665 -0.7242204095712 0.169048518856348 -0.531553165999589 0.0177849672229719 -1.13839964027055 -0.0466688682695674 0 -2.07007938456015 -0.541358903373796 -0.241697603123524 -0.192949503556807 -1.52599797323426 0.0884774193226949 0.185855170512812 -0.958876179279732 -1.87504376347451 0.773703011553072 0.00778732359534367 0.448883493309094 0.183128198975065 -0.141242908385018
[+] Show/hide bicluster #105 motif PSSM #1. bicluster 105 motif PSSM #1 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 1 0 0 0
2 1 0 0 0
3 0 0 1 0
4 0 0 0 1
5 0 0 0 1
6 0.333333 0 0.666667 0
7 1 0 0 0
8 0.666667 0 0 0.333333 [+] Show/hide bicluster #105 motif PSSM #2. bicluster 105 motif PSSM #2 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0.857143 0 0.142857 0
2 0.142857 0 0.571429 0.285714
3 0 0.428571 0 0.571429
4 0 0.857143 0.142857 0
5 0.142857 0 0.857143 0
6 0 0.285714 0.714286 0
7 0.142857 0.857143 0 0
8 0.857143 0 0.142857 0
9 0.142857 0 0.857143 0
10 0.857143 0 0 0.142857
11 0.285714 0.142857 0 0.571429
12 0 0.428571 0.571429 0
13 0.142857 0.428571 0.428571 0
14 0.142857 0.428571 0 0.428571
15 0 0 1 0 |