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[+] Show/hide bicluster #103 rows and columns.
bicluster 103
Mycobacterium tuberculosis H37Rv
22x38
[+] Show/hide bicluster #103 rows (genes).
bicluster 103 genes
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #103 rows (short gene names).
bicluster 103 short names
Mycobacterium tuberculosis H37Rv
22
short_name
[+] Show/hide bicluster #103 rows (long gene names).
bicluster 103 long names
Mycobacterium tuberculosis H37Rv
22
long_name
[+] Show/hide bicluster #103 rows (NCBI RefSeq gene IDs).
bicluster 103 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #103 gene upstream sequences.
bicluster 103 upstream sequences
Mycobacterium tuberculosis H37Rv
20
upstream
[+] Show/hide bicluster #103 columns (arrays; conditions).
bicluster 103 arrays
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #103 ratios.
bicluster 103 ratios
Mycobacterium tuberculosis H37Rv
22x38
GENES Ascididemin_Natural_product CCCP Cephalexin Cerulenin Clofazimine CPZ DCCD Deferoxamine DIPED DNP DTNB DTT Eta GSNO GSNO_CPZ GSNO_KCN GSNO_menadione H2O2 INH KCN Levo menadione methoxatin Mtm Novobiocin NRP_1 Oflox pH4_8 Procept_6776 Succinate TLM TRC TRZ UV X_109 X_111891 X_59 ZnSO4
ORF01392.2 0.199844002214397 1.66334670652194 -0.466933804286312 -0.429338752046649 0 0.209944218704731 2.22144604543683 -0.213870291420275 0.0646648929550994 1.63128387007418 -0.699383562841241 1.11364860429102 -0.209304279661831 -1.33546922681061 0.109832090062510 0.31777679874439 -0.271471676552182 -0.0895438923086016 -0.417794172027308 0.765455554665123 -0.501572866649723 -0.0694256514471562 -0.794418656378608 -0.365484376104582 0.50712896676645 0.332241667859724 -0.275969289868379 0.304560716545367 -0.0687665005436936 -0.489839986107718 -1.13075860272278 0.61339464241557 1.20106990560139 -0.121278997894656 0.210558467716717 -0.554655933035583 -0.120362795407572 -0.92469877741493
ORFD0400 -0.400429334994516 2.91029522046171 -0.238067015508001 -0.660242342559988 0.0701404725993086 0.528207989358849 1.01477518044645 -0.666797380603036 -0.95207000759058 2.14985662649410 -0.519185007891742 1.74593452008666 -1.01917540056798 -0.348687474791933 0.956987660810084 0.491459118736782 0.775878467330921 -0.501077629036989 0.0867660671303435 -0.298866463884739 0.250879068405929 1.03679205250333 -0.482317327343561 -0.273721205199987 1.38776984916920 -0.127428962122571 -0.178275669117480 0.576282835433295 0.428576668964839 -0.245023560516471 -0.848734669319014 1.41328923832164 -0.170423382299530 0.018239964668632 0.0250431356790813 -0.566270249709596 -0.166971108348954 0
Rv0750 0.0461529062286496 2.00403465874383 -0.52327408687179 -0.533561441899051 0.498462570885101 0.63695682810252 1.75433590352133 -0.55330498339624 -0.7608653791755 1.78573490752738 -0.836187395971514 1.42728543793063 -0.611532911781248 -0.356882542551246 0.998773471615722 0.417113798781479 0.685878582374091 0.0853180805063 0.116975347160232 0.803329193033388 -0.635309916538744 0.944327366617729 -1.13466504536484 -0.210763126239136 0.191557722606293 1.78579001251750 -0.784445952511664 1.15441105412247 0.672437543882385 -0.76508507373748 -0.481481540697785 0.512832394783366 1.90274952879990 -0.254496510527671 -0.378617723140785 -0.531887674077497 -0.292239162484891 0
Rv0834c 0.202396185304264 3.22231730939588 -0.449513225599086 -0.899065789033677 1.02034899227453 0.724877002402434 2.70157920515143 -0.899590046425942 -0.296125596601776 2.29212158773647 -0.644846129502878 0.954456536169017 -0.791950911994924 -1.20183972298258 1.36717464024124 0.316738411128599 0.542623542838251 -0.150665475095012 -0.508241620707123 1.13454377675645 0 -0.199463959711869 -0.988552385553032 -0.58009753828888 1.53570286130015 1.53261194115711 -0.420240594033576 0.556689818234487 0.782763170297562 -0.00325285822379697 -1.03337522171034 1.33912483605697 2.15749362104433 -0.762830266018908 -0.475699526120952 -1.10920216560319 -0.841896309099649 -0.626504629994372
Rv1404 -0.515973638135024 2.43144972023649 -0.400399577842247 -0.358919509240201 0.0793544870662653 -0.0254824990314797 1.43007191223538 -0.94545097384796 -0.597337644650566 1.95499995780595 -0.625871461120213 1.49048218229833 -0.185194800401229 -0.358596853681489 0.101649419814870 0.503693422350293 0.301680579601439 -0.280212717958286 -0.581600500955522 0.989136001101691 -0.0303537020306693 0 -0.738727282327751 -0.666562153226886 -0.946021054348074 0.939404561993783 0.149402948683546 0.809263562434933 0.840220459215548 -0.992043748092782 0.274072197248581 0.128908778041995 2.57753562872117 -1.32005485140450 -0.198258449011502 -0.727931666809364 0.0102625682207317 -0.0460498530762816
Rv1989c -0.0298018418704816 1.97366018550204 -0.519893106327048 -0.37226640888892 0.277398683765134 -0.251006304913530 1.25219538425048 -0.66189266983708 0.147590405332449 1.15988827471781 -0.512140847225492 0.997829346873439 -0.0444986237332868 -0.817978740793571 -0.279049357040915 -0.152867509660653 0.0626678507514455 0.212854463332904 -0.450143322531532 1.63730408132060 -0.56365389246902 -0.0149876248621996 -0.586103928415751 0.212854463332904 -0.140662601740119 -0.107274943651022 -0.448785174072359 0.212854463332904 0.311388684875047 -0.880025561666267 0.0432478999564242 0.654775569611428 0.774031717217801 0.212854463332904 -0.151938522838247 -0.699894505450113 -0.20045352284741 -0.187070462985967
Rv1990c -0.22599442276879 3.08060209875134 0.0725237659282998 -0.387129872452093 0.925739532688906 0.101004858688950 1.65257833337213 -0.383589863476894 -0.448701970015753 2.12987598792860 -0.158322545505332 1.58515119942958 -0.0511902445786186 0.0142403057253594 0.285468222455489 0.864630065117545 0.276938566799192 0.00621374233109014 -0.108561989280812 1.05932834895179 -0.174762095250976 0.455154215312202 -0.230709059181853 -0.214086965141838 0.295563069106044 0.790594518035325 -0.428609115605785 0.373410829828113 -0.210298092254709 -0.282722190345506 -0.156211721342895 0.74835883241003 2.50682917103363 -0.492877553641672 -0.173439512251117 -0.511049073274677 -0.174686281711662 -1.39119553457895
Rv1994c 0.391130314891115 2.37659114355261 0 -0.463759364639212 0.906115424990612 0.247201811838628 2.68426661397535 -0.235601581084843 -0.863373721967539 1.53660102708649 -0.727557708161932 0.835019494629899 -0.642984781840686 -0.475121351462882 0.148760782038868 0.818342864777836 -0.0543965585071241 0.812197747347644 -0.88440470434943 1.43576604322501 -0.593745684988463 -0.158404322129360 -0.725644297184772 -0.173050748147614 0.422470547062409 -0.462771778747156 -0.452907592323603 0.173043840688942 0.156989404244987 -1.48870775156861 -0.171184127990010 1.3032575510467 1.3184024531861 -0.255677770782145 -0.666821687944766 -0.0103111246567807 -0.320426042129281 -1.50381923853974
Rv2034 -0.304487563002492 2.22621738912958 -0.196373056250751 0.157389479077527 0.510062073210651 -0.213402446187785 1.33498241739704 -0.473366882047608 -0.479713679086109 1.70537112888928 -0.0261613434947941 0.634186689791188 -0.25796600069939 0.141612360220597 0.350708271765802 0.766936777770334 0.300279113718845 -0.56251924451769 -1.12962934349470 0.412302234851072 -0.361010523472302 -0.300475170310555 0.0836649620825339 -0.426167044942477 -0.0945746830252919 0.67387000841039 -0.531987505512434 0.748547891589071 0.489267263221536 0.205889451043337 -0.20382388906444 1.14593807533274 1.93024253602899 -0.761559192239325 -0.483777961540825 -0.60998509754701 -0.556590809678058 -1.29649584019931
Rv2035 -0.602139530268311 2.77719156039805 -0.526923197250619 -0.47949609995423 -0.0180508137440653 0.073586661583653 2.32546591159673 -0.63665634970074 -1.40642044384255 1.95169601403387 -0.490886190540926 1.44037591808876 -0.81597916290944 -0.331288297363621 0.791542377103624 0.420278536595903 -0.0525660455045068 -0.152261025369384 -1.56140438655679 0.133135488110741 -0.236143911465338 0.253987518710625 -1.09304273005959 -0.168740118372349 0.199279151403971 1.33707796884022 -0.322719824618782 0.54004473396977 0.117507278165347 -0.746092953503291 -0.0858286586309018 1.22498415043045 1.68235342218502 -0.558252608797297 -0.897197443006543 -0.463720621121921 -0.668804367851759 0.145106232796364
Rv2159c 0.0339262304898543 1.79287497226514 -0.563460406670689 -1.28239531331046 -0.374057328957351 -0.0662856056551452 0.387321543162601 -0.752454582765675 0.061323262303445 2.87595890242902 -0.246047121005316 1.41402222170069 -0.110681898293441 -0.486304098774058 0.289329239720183 0.0972201096316647 -0.811869404591754 -0.874234081558482 -0.0561600317833546 1.78403809957072 -0.208551009138157 -0.763009395876144 -0.489622354704888 -1.17324027137126 -1.53278334262809 0.433807978073932 0.203863399198573 0.171562646880672 -0.0272069818489937 0.376669297614999 0.253814611151470 1.39270413093307 0.790525180083287 -1.08932163270090 0 -0.588207463659534 -0.279608042869460 -0.272012189231058
Rv2237 -0.00810268868739754 3.21272519642587 -0.245528066588891 -0.677279179160297 0.848409519436923 0.077780764812311 2.55535140245023 -0.868830904995859 -1.78357253233536 2.13795906694780 0.338530007107177 1.90083925983505 -0.432066287904627 -0.908184424097545 0.728988652787492 0.690240314280434 1.44014929209036 0.0669802496427844 -0.529108969687995 0.352054892117308 0.169981096388203 1.07461744339274 -0.587884523006872 -0.781438272316822 1.18932286312746 0.362634925871547 -0.190394631486241 -0.158785069824633 0.156184805930550 0.210519975850407 -0.519338637112869 0.793571336130989 1.94679030434119 -0.686934685144901 -0.598445983542566 -0.424748483317227 0.416239570149172 -1.95147813924830
Rv2342 0.283385156487868 3.66371684528488 -0.126675712009185 -0.617404968320901 0.94285100092055 1.12652655379566 0.458816233981586 -0.263052760482468 -0.598913567460596 2.05673232061619 -0.370237552413832 2.16850969524285 0.137890030124551 -0.52667161221358 1.37631576724482 0.974502499910567 -0.83343318746174 -0.727142648219085 0.373767890024116 0.441300405071147 -0.543350240064033 -0.71299019124727 -0.309226485260764 -0.262687478997744 -0.169697694710904 0.0336097454215194 -0.43999806771526 0.59426382523594 -0.456644484443951 -0.360370412712796 0.092744558392765 1.57552507213088 1.7679247331898 -0.397997328968011 -0.319996541960605 -0.526024327402462 -0.345053859126780 -0.774888635482333
Rv2557 0.414240822895342 3.16354154941478 -0.640881218585551 -0.746652815051623 0.709592336045241 -0.0979696956997911 1.24390426583906 -0.380574142480142 -0.133785688328591 3.67933649531365 -0.270354879323571 1.06098742350044 -0.342142473492046 -0.417233975988061 -0.170606987863128 0.146573122654001 -0.342197966533412 -0.924221457995086 -0.389597908079597 1.10373881505355 0.0823711971061446 -0.567296001164641 -0.699854564617674 -0.894377361794886 -1.13134164510549 0.618933060466543 -0.349746128512827 0.458851462627682 0.679541082055062 0.173291261574802 -0.474959947662532 2.27904520100394 1.72201607680856 -0.752191232743872 -0.83491133749276 -0.521943173741668 -0.616756607500862 -0.359295377795394
Rv2777c 0.386855723563318 2.52620533755899 0 -0.769592611219752 0.884567622209139 0.951845748444274 0.122916629814765 -0.401015486915342 -0.908673953117346 2.04329013151566 -0.418835607851855 1.43363810088937 -0.531705546497986 -0.442167198939038 0.746193953888022 1.01435510479378 -0.513217508300143 -0.55634696381447 -0.424368509050282 0.928342034311126 -0.0493908506498393 -0.636361804611289 0.453568929287218 -0.57549993097785 -0.186866680905248 0.440988197019292 0.297801961493279 1.81339432692377 -0.464692188620895 0.268343696345772 -0.0600066359401812 1.67283565836184 1.23204496454651 -0.0564948416729724 -0.62190628837999 -0.634062327865152 -0.717121100962502 -0.845126696149994
Rv2780 -0.525253778591662 3.51677779074355 -0.0292949104010748 -0.0384483388269767 -0.367394931231409 0.274202486379891 1.05173960214279 0 0.0678028654398652 3.98088741957625 0.143119923109725 1.57923790640701 0.00079158730574366 0.112806041429509 0.09847794236188 -0.0180866467215783 -0.150637753818701 -0.0968860120583702 -0.28758044838907 1.64755956841195 -0.214236383424894 -0.497843266029381 0.210890280195969 -0.213116774378019 -1.04293375440716 2.10063499812765 -0.191911713212762 0.740544358893977 0.264476097796492 0.58188817472865 -0.325513216670800 2.15095916917702 0.756139771578278 -0.201249492751193 -0.200861219112571 -0.0599722014582276 -0.159268134177464 -0.459953067158535
Rv2829c -0.0181876488979571 2.43034901477594 -0.150820928086962 -0.594313938030956 0.549150282428898 0.370232808906263 1.96246622968113 -0.55539268764961 -0.836850158669115 2.69056632291238 -0.522653676575708 1.37286805890946 0.497651525767629 -0.534467753350725 0.94667754232177 0.782134891112828 1.14385409177431 -0.43840190869771 0.55265138015596 1.71764068005115 -0.873241970878898 0.277920879589952 -0.776064076246345 -0.817945516481366 -0.43106290342133 -0.553062158449159 -0.548565886063863 0.09521764247415 1.6063067898941 -0.297819291111551 0.0381018734061409 2.02036244651005 1.14430704832262 -0.86494036285636 -0.500210265817028 -0.205715870934858 -0.0399330172526034 -0.898135589398657
Rv2853 -0.199848049651657 2.57192478322548 -0.313293875228298 -1.00339745509140 0.810630921540555 0 2.89440369135207 -1.24201923617350 -0.700355067356665 3.05989566346878 -0.167013330057546 1.73100608708862 -0.705092618656751 -0.388735109900419 0.578409337050171 0.987704407923819 0.322724138539617 -0.395907971466997 -0.597029903743972 0.672782697782768 0.613524474635471 -0.0399993030827851 -0.355168478945750 -0.871893244204063 0.860039432380283 -0.110554844476565 0.53446066529073 -0.111762000013824 0.083344573356003 -0.059132286756258 -0.0869244385190504 0.379799734861726 2.05128399184854 -0.944866634312492 -0.0900946425566099 -1.18958303183106 0.226085823500402 -0.715161290501983
Rv3287c 0 3.25558695491447 -0.715040463263175 -0.173968741445265 0.859577839221268 0.490649980497133 3.24979986226783 -0.54748878052541 -0.390148221327756 2.70206407398994 -0.0380818233716391 1.47197734476727 -0.232793118871038 -0.230753327045946 0.871842822996459 0.297644848780094 0.346729453037824 -1.08556651566698 -0.200576325481716 0.976642466469731 -0.341598451199644 0.389816314469215 -0.221066651892774 -1.08017402950308 0.0442737093359796 1.88495553945180 -0.421231833956403 0.0657686439337441 1.07815027446963 -0.323187617675857 -0.532812631554557 1.82001599350663 1.72261398013620 -0.989532250453698 -0.625248216809317 -0.825488584843378 -0.652951141998642 0.343851518096555
Rv3290c -0.0454762167825074 3.30823685162721 -0.298771110852526 -0.259466007606135 0.209236657203456 0.253220597759121 2.37157166837728 -0.294543369966277 -0.585065217971243 3.29448488088694 -0.325640417939573 2.88333867789998 -0.15752448481214 -0.426301230518802 0.267101459305148 0.705301695713131 0.0279931884321091 -0.036047798873409 -0.261482295080608 0.828343434444952 -0.0292651872730225 0.124270672288742 -0.228811093402931 -0.396276156655385 0.349225744471532 1.47370893475059 -0.358509313707390 0.0467888021325631 2.71208828295080 -0.302674374734196 -0.316434489550135 1.73280118831763 1.61028809358573 -0.566312091283712 -0.0544167044863039 -0.331427041565357 -0.105711210447770 0.411029228734932
Rv3814c 0.100311383267122 1.70518594003604 0 -0.616351703877924 0.570323711179869 1.26670053584929 0.913634803569377 -1.10190307093613 0.243180066885791 2.22554802253197 0.0171188006003450 1.29458899191035 -0.276786578401151 0.0471988757251184 1.72840151771218 0.697368865692421 0.843369389668733 -0.315343138740014 -0.884944359477192 0.436796529176917 0.81651386141759 0.378335096987394 -1.12490864555265 -0.13668461546428 0.656639646186634 0.982195182963963 0.375024548369154 -0.0239811182650426 0.286683338327326 0.385676703151454 0.309684670694794 0.260843012183430 1.79642305874034 -0.47430061052215 -0.561527657673693 -0.690454573437789 -0.278035045546469 -0.0707163042029958
Rv3917c -0.408275780514111 1.60186773563935 -0.306653080747946 -0.220805501041901 -0.364770578296521 0.569420802699757 3.32203052949203 -0.337086724853063 -0.376624107802219 2.04718285086456 -0.681852134664969 0.99906328986701 0.150842133239323 -0.317580267903181 0.758241720819701 0.950040447433126 0.0648322394348871 -0.513263642901442 0.456598457584283 1.30146037498406 0.0521183600253841 0.272264551011097 -0.907877963338036 -0.766580542604424 0.82732673828396 0.39030196011 0.137850044038796 1.04739319073298 1.65336169008313 -0.357506897125378 0 1.06722717255614 1.33255299629003 -0.584676519315267 -0.479953958135885 -0.408652241086152 -0.62994211702297 -0.458993282492872
[+] Show/hide bicluster #103 motif PSSM #1. bicluster 103 motif PSSM #1 Mycobacterium tuberculosis H37Rv 16x4
POSITION A C G T
1 0.026399 0.187887 0.04503 0.740685
2 0.571429 0 0.285714 0.142857
3 0.857143 0 0 0.142857
4 0.285714 0 0 0.714286
5 0 0 0 1
6 0.285714 0 0 0.714286
7 0.285714 0 0.428571 0.285714
8 0 0 0.285714 0.714286
9 0.428571 0.571429 0 0
10 0.571429 0.428571 0 0
11 0.428571 0.428571 0 0.142857
12 0 0.285714 0.571429 0.142857
13 0 0.714286 0 0.285714
14 1 0 0 0
15 0 0 0 1
16 0.857143 0 0 0.142857 [+] Show/hide bicluster #103 motif PSSM #2. bicluster 103 motif PSSM #2 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0 0.777778 0 0.222222
2 0.611111 0 0.277778 0.111111
3 0 0 0 1
4 0.055556 0.833333 0 0.111111
5 0.166667 0 0.833333 0
6 0 0.055556 0 0.944444
7 0 0.5 0.5 0
8 0.5 0 0.5 0
9 0.444444 0 0.277778 0.277778
10 0 0.444444 0.166667 0.388889
11 0.166667 0.111111 0.166667 0.555556 |