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[+] Show/hide bicluster #102 rows and columns.
bicluster 102
Mycobacterium tuberculosis H37Rv
22x37
[+] Show/hide bicluster #102 rows (genes).
bicluster 102 genes
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #102 rows (short gene names).
bicluster 102 short names
Mycobacterium tuberculosis H37Rv
22
short_name
[+] Show/hide bicluster #102 rows (long gene names).
bicluster 102 long names
Mycobacterium tuberculosis H37Rv
22
long_name
[+] Show/hide bicluster #102 rows (NCBI RefSeq gene IDs).
bicluster 102 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
40
[+] Show/hide bicluster #102 gene upstream sequences.
bicluster 102 upstream sequences
Mycobacterium tuberculosis H37Rv
20
upstream
[+] Show/hide bicluster #102 columns (arrays; conditions).
bicluster 102 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #102 ratios.
bicluster 102 ratios
Mycobacterium tuberculosis H37Rv
22x37
GENES Amp Antimycin Cerulenin Clofazimine CPZ DCCD DIPED DNP DTNB DTT GSNO GSNO_CFZ GSNO_CPZ GSNO_KCN KCN mercaptoethanol methoxatin Mtm NaN3 Nigericin Novobiocin NRP_1 Oflox PA_21 PA824 Palmitate pH5_6 Procept_6776 Rifp Rox SM TRZ UV Valinomycin Verapamil X_111895 X_241
ORFD0052 0.581505364621857 0.870941501238648 0.212238722585070 -1.48292628129030 -0.357191537840704 -2.20741368274665 0.166965704949101 -2.15687564495088 0.336418779484674 0.178008108639031 0.422768285630223 -1.03655617239824 -0.412606175329493 -0.477463088048371 -1.85401314987075 1.85464836235992 0.473671434556372 0.113870656716394 -1.39007864882102 0.362010493898585 -1.78770255753262 -0.210177717145963 -0.734723056676718 0.214308857953438 -2.83466941220835 0.138596332433345 1.23878290205758 -1.62047811496988 -0.878909778481752 1.28113181275112 0.80431197548751 -0.317287984432215 0.159578577978857 -1.53594282009006 0.307961232007142 -0.0122748806856826 -0.507623308718385
ORFD0126 0.288489373364602 0.515865761223342 -0.448038110274488 -0.82095962305076 -0.19591622840389 -1.80876620319990 0.578109143181152 -0.844886290999159 0.505029405525732 -0.141214757877207 -0.0235071546563553 -0.123758405043913 -0.442740452688486 -0.845661974624814 -2.49857388579002 0.698406277980521 0.0716087522644904 -0.0857092752233647 -0.34474025821549 -0.0475749663749483 -2.46446414280108 -0.716116672791278 0.596610342979534 0.361582057179492 -2.08831086963151 1.85124028764119 0.458692110574252 -2.48658854655168 0.701341463280661 0.261246144194959 -0.146322204123032 -0.987117196880957 0.204669114988243 -1.47223091608416 0.315898251890313 0.564403491909176 -0.299707083972209
Rv0057 0.215665945958666 1.03705934303101 0.717172887629922 -1.85410748954118 -0.364590811040191 -2.71405185339921 -0.052634882836385 -2.16441774235045 0.555214582450046 -0.607298309349292 0.162057175075546 -0.401891509600096 -0.319512007536848 -1.43986383830659 -2.58889116237157 0.470036052617721 0.699314251072702 0.5307609667605 -0.288677718322416 0.141125708053232 -2.29206747072516 -1.04900324439202 1.87425862527264 0.48373137632859 -1.40406492188962 0.489579735113640 0 -1.40091074569796 0.703199153887256 1.03938052830153 -0.0340138555374615 -1.10519088774965 1.30820248388548 -1.16711594836959 0.236070523627947 -0.745039613592343 -0.775796304500662
Rv0506 0.291148344318689 0.474368888387617 0.459348202889393 -0.489359838959979 -0.187658376980482 -2.79644025937248 -0.907601368188698 -2.65115988582048 0.263664305002629 -1.32599103653866 -0.103726298428315 0.148451176282208 0.0775725465066847 -1.49660514007065 -1.89197214496833 0.261194327104571 0.334866252297237 0.885041926970182 -1.07802775932982 0.0167362153221565 -1.12682621207947 -0.816855157813159 -0.111596316330761 -0.0993288278199884 -1.27801009246457 0.619918455633104 1.8308634924128 -1.28972042364278 -0.575702873108696 0.74672693263785 -0.64924479143132 -0.634890051598904 0.961658189310147 -1.46071100098314 0.0868791811976181 0.389677170954926 0.113156750602643
Rv0692 0.477772647432053 1.21230098435599 0.106530730132932 -1.64548706416918 -0.318206564708703 -2.31789132651060 -0.28622966255725 -2.09047880983094 0.440349397252152 0.0180688683951368 0.463004474384764 -1.18499297437082 -0.507227096066028 -0.399598654154379 -1.63663595412320 1.97642764475351 0.490638618518178 0.191113307680199 -1.35203102115539 0.266278159290045 -1.60464596992020 -0.247237913107669 -0.939533214619364 0.421019997952083 -2.71422445019592 -0.125015808685333 1.33378222362872 -1.69535768751293 -0.480370689335626 1.33143938784153 0.786705422896613 -0.877753253341139 0.0788946706685812 -1.27762503091427 0.448923295138393 0.0971941647442686 -0.437473028756311
Rv0693 0.607881419237374 1.30938550733978 -0.440652645452023 -2.04461172201699 -0.452555225370458 -1.60049410480687 0.174819109730917 -2.04711420156183 0.285588891430465 -0.455653592425754 0.106474323260828 -1.36288724552789 -0.607842211063878 -0.259638599237034 -1.31954920277212 2.09803535411901 0.671083228731969 0.136469434443741 -1.73643472784149 -0.359970871871506 -1.93149914032001 -0.507030039232441 -0.388476692983373 0.480960233700454 -2.60314193612134 -0.416052687323858 0.84067377664608 -1.35210127154107 -0.276944087684624 0.861974919259918 0.823305299994194 -1.32858428328915 0.421267092438764 -1.87042525418363 0.367567213881183 0.0420351408742958 -0.214737052211750
Rv0694 0.379144944468608 1.77479478872825 -0.290109567055672 -1.75671511911679 0.137771682184186 -1.88082894078101 0.806647694790296 -2.67166539888734 0.655970608843057 0.30331071798444 0.30135315033128 -0.0314216340433615 0.279017493409215 0.189799302385336 -1.48622119070762 2.61875242220415 0.575051980190843 0.213371823878577 -0.563793272646433 -0.451388753112408 -1.67971912271006 -1.17020948221583 -0.718656596238587 0.826001473421715 -2.45551211612374 0 0.935590535010138 -1.14623894943401 -0.149946123085325 -0.904613930856544 -0.654813108951987 -0.996202618724935 0.345167311051185 -1.50429509952400 0.405003257250124 0.321106267770091 0.0689487365307448
Rv0759c 1.01271781821159 0.751273590133094 0.424308599058636 -0.708320876570954 -0.861488119444324 -2.05384764027768 0.64962845921648 -1.39639915089807 0.834427308465326 -1.05565579997619 1.08222569809455 -0.599927840765118 -1.51101522300022 -0.0360972084725231 -1.38593613350225 1.04547787022661 2.10530356748397 0.463944777329155 0 1.54521970933533 -1.20528666870717 -5.98798985226364e-05 0.427116824789208 0.701375795674323 -1.29974072227985 1.44922070903498 0.386650546026279 -1.29880978101378 -0.292676626195354 -0.50472553250168 0.669216458113277 -2.38253189690476 0.0831558046853635 -2.33321274265838 0.600067189720393 -0.605017036836427 -0.781720360139232
Rv0888 1.20688057269343 0.387492007882446 1.22365277929870 -1.16426712005799 -0.61985599228053 -1.99803555191700 0.599194251432242 -1.06041964551089 0.77891098347443 -1.01355833581092 0.683595865171658 0.098743773666555 -1.27967734619196 -1.22817135507054 -1.61848352843499 0.826620737090476 0.846948366380884 0.183532919767661 -0.503372070991719 1.00683938289240 -2.35096295698905 -0.988518878690858 -0.982738911502635 0.633757581954059 -1.64232782360053 1.25820040532747 1.10833882436195 -1.79405195539896 0 -0.572659092472231 -0.523382689058775 -0.963807555618774 0.0604876633269633 -1.59164536261587 0.81100354591483 -0.4823157756882 0.59781605555137
Rv0926c 0.0220312722186049 1.02815646656276 0 -1.57518551178312 -1.41916464438975 -2.86153413755837 0.18485197292108 -1.67565563452497 0.638030791946044 0.0604314407391765 0.359389609020173 -0.95476686739369 -0.721724548586002 -0.337805715776906 -1.66001207913617 0.238942070563086 0.0807116465753625 1.19629313801530 0.790939527664643 0.841884599731244 -1.30879796655710 -0.2018179643352 -0.836480753836489 0.90519838779495 -1.60012619297500 0.754716033311074 1.88102980902937 -1.1006824194986 -0.149272109313069 0.0217740756470984 -0.572831770210371 -1.44314424440985 0.546250918284487 -0.354471177306713 0.0584298845562171 -0.420130642261947 0.136939646338722
Rv1206 0.332294951724121 0.139643267439303 -0.112645038738362 -1.05753710205809 0.130158224901851 -3.02298993544939 0.0937838814877616 -1.90714401539861 0.79212277069853 -1.80079044413669 0.413652834171024 -0.204674309265654 -0.861036979548068 -2.02079850503710 -2.38061782378272 0.130205579826908 -0.0584386925036927 0.651148063378111 -0.429087623879872 0.781953408244954 -3.09105387179388 -1.27595103545506 0.185789996956321 -0.308348316691487 -2.19759519366482 0.564780686054964 1.10334172341524 -1.08740809177382 0.155281112408662 -0.373077670641097 1.04191213462658 -1.52733647879431 0.405360078809049 -2.31967452660179 -0.231711432097876 -0.480098752671583 -0.537011654657976
Rv1360 0.504290832837937 0.419973848293173 0.826786231559586 -0.0386462224326704 -0.0854377862639579 -3.87541533868791 -0.073913174239089 -2.95715301241177 0.56335583080653 -0.743073158210731 0.867846545874517 -0.112323079999495 -0.253977405108878 -0.384222704696146 -2.39750857301527 0.477140011344471 0.649582122398388 0.414888532239508 -0.534248998833631 -0.0122382513750107 -2.15722833898535 -0.0116906867103918 -0.52905288872893 0.79624431043569 -1.21593617797574 0.841696352361537 0.227943379032829 -0.812261874533682 -0.451906125615448 0.0565838250349377 0.113375742938284 -1.32848265524315 0.0900972632721156 -0.687809651582222 0.76113816611019 0.0453140164576338 -0.250889965592413
Rv2140c 0.259977298405281 1.07159667616074 0.763007861869378 -0.847503171727693 -0.475088370146532 -2.69452428404458 0.770091436244252 -1.59483093580609 0.683014505770896 -0.486616345603928 0.833148309117575 -0.681148648064888 -1.15098969005245 -1.03713150763124 -2.74624877554657 0.785160955158856 0.590850268162441 0.734441515865407 -0.718165826874442 1.07251547097072 -3.39446115747953 -0.302150312973371 0.266344266633839 1.08623056021253 -2.14632695028701 0.999548197791138 0.987926173653709 -2.57592287457420 0 -0.48327153518067 -0.476954630989269 -1.75477684224923 0.547759080238697 -1.00618043576292 0.0481652446822899 -0.108322916452633 -0.540623065745716
Rv2357c -0.267584357635032 0.509992572796366 1.15453970289294 -1.36547985970466 -0.78688594876484 -1.66722585993080 0.624945530622664 -1.94810777694380 0 -0.549070577481651 0.580987943685443 -0.587187869465645 -1.41507271795501 -1.67951992168354 -3.19952706475726 0.377996116426325 0.83095178343015 0.566126002927441 -0.982150866892915 0.173052556636270 -3.22474446949886 0.00152999900820010 -0.369397611603131 0.163739558866925 -2.12050803001272 0.212580132646557 0.607095057452975 -1.18097287947997 0.475050408734057 -0.534368074208914 -0.00647768447532671 -1.65131842475496 0.49709236733596 -0.892869581985332 0.224406603266952 0.341360243309104 -0.442656983833528
Rv2435c 0.166036152638504 -0.0381167330956501 -0.0414376270161358 -0.766445918570257 0.207416127638473 -3.2790304500344 0.727295754814723 -2.96748509635584 0.205961618472059 0.0521850287166581 0.300400918713131 -0.246860643388565 -0.124638920044512 -0.65168656893616 -2.3393011294249 1.15713859410313 0.186058007097155 0.508319377525007 -0.715543401161097 0.227196905217305 -3.10222989829451 -2.23550559884741 -0.354384562047671 0.4965024823929 -2.21937296691154 0.861681558071812 1.02163928291360 -1.21597133627712 0.112998142873415 -0.222551011577893 -0.238905597327742 0.235041937085824 -0.0140960933004802 0 -0.0847441377719348 0.0884948843647477 0.0566457066847275
Rv2561 0.709677588842747 0.281318680769990 0.54557254091376 -1.14944526381872 -0.83185058782442 -2.88870506707601 0.55503729267335 -1.1886583303658 1.11550028722328 -1.30395873446245 0.980690390153705 -1.08812442472394 -1.29577342961533 -1.81550957635881 -2.05768423188293 0.858752574823082 0.90075274216888 0 -0.72911406852807 2.18668722853198 -1.29292224548902 -0.295556492648282 0.587363107705598 0.387517344626219 -1.51267720253249 1.18978456140769 0.592971015112308 -1.26672116221943 -0.679295597364194 0.537732060561039 0.505581202183745 -1.46245525932683 0.643061411969642 -1.17784331935389 0.666626867310012 -0.925173769220401 -0.564051820943028
Rv2716 0.261289753883055 0.835429583305086 0.271583253952838 -0.694124162331029 -0.784172712016823 -2.82442113098128 0.000395958603710887 -2.55257644903258 0.669594050455607 -0.419841896189086 1.05973207601861 -0.0630401417011176 -0.91207936569 -1.06653239490788 -0.974553240304078 0.748465395960543 0.653926394494799 0.368008259360122 -0.107501691600972 0.783551522130897 -3.39716930078562 0.476865236176219 -0.114321262238535 0.959166462929786 -1.19005528418987 1.65636711217531 0.147977986818552 -0.855662113088305 0.0453096686317801 1.01814976246750 0.144396265787855 -1.40771198920215 0.50487052765233 -1.00162376643121 0.657215363511535 -0.551330251854861 -0.639425172157828
Rv3029c 0.87268246373393 0.675709104198594 0.593545390142687 -0.633473006441569 -1.06274666377144 -1.78657097989674 1.18325824922008 -2.21349892093522 0.413883128156889 0 0.423017401580056 -0.537002336940009 -1.89845167958340 -0.753588820402543 -1.84488754663977 0.353365273610934 -0.0363259344655691 0.627350354456664 -0.924865160576645 0.413770872971296 -2.63703423329292 -1.00459046716526 0.430187249443469 0.358338507440778 -1.93904437011268 -0.286311011953243 0.232181434379152 -0.530238670372667 -0.111740078207628 1.18446065595017 0.756805334980186 -0.850478977811483 0.539654124842475 -0.303543710090143 0.242097934737721 -0.149866508732365 -0.181842651968017
Rv3232c 1.0441072258244 0.667157468642137 -0.0711856625992589 -0.927510395271832 0.137426681198276 -2.25334085772386 0.773732301014919 -2.36071031864668 1.02691608737757 -1.24503748683181 0.816623654184746 -0.776887380824697 0.340769603933479 -0.991323311732227 -1.5983850284209 1.63602487896045 1.05860230303901 0.471878406993277 0 0.563810499520123 -2.39263025758218 -0.299923162448770 -0.707327185466865 0.705494493138411 -1.87317104463175 1.10575020745808 1.36185030549201 -0.385507155996627 0.0945639478243921 1.72898238094227 -0.0438018550716578 -0.77830922532937 0.45505931127743 -2.2168836776677 1.54903981176277 -0.222646990277301 -0.0323613977419663
Rv3234c 0.791986189961106 0.616650319831136 0.391417936467628 -0.230882446930598 -0.83487957215308 -2.34109683829441 0.229654306504347 -2.96269526733946 0.758667802955449 -0.434192253717056 0.642497063048394 -1.08462368382701 -0.794350793994283 -0.747656912865078 -1.04404657141200 0.449586748879808 0.959906856056327 0.978543379157102 -1.39822987463674 0.338589432037377 -2.72065174373339 -0.0531410797772753 -0.533339050979405 0.252122605992282 -1.45707060338217 1.17770250233864 0.320233652721789 -0.643444224221184 -0.204457138249971 0.772246301189389 0.0758372820954357 -1.62640800944741 1.38481689185537 -0.420027322333551 0.794025629880753 -0.122866598909427 -0.563769780426879
Rv3600c 0.242155312066500 0.32241593150563 0.414395676387885 -0.370989656463622 0.463858315537016 -2.42174541957410 -0.818661535807005 -1.15344069421768 0.418203681111325 -0.690421933069051 0.263324631417558 1.47212835324359 0.966289551405316 -0.868883439169934 -1.62948738416048 0.772090587850226 0.693544726566883 0.566712308990596 0.0493488149252838 0.222397659036185 -1.86293336873068 -0.927359012566205 -0.00647831881353437 0.149526816298388 -2.65485563603127 -0.658102561318428 1.06377693936665 -1.35074748075808 0.0092288218662727 0.75543830721089 1.06748572854604 -0.537539683810864 0.463688748831839 0.00437607576869698 0.154485220080615 0.475277961146554 0
Rv3601c 0.683945120567945 0.41867585584408 0.626729363687524 -1.42715395396999 0.0233000675843091 -2.26868188808790 0.74315693847173 -1.86836824689643 -0.303488957453484 -0.411404946167414 0.234426783080821 -0.280130723592213 0.287827234920434 -0.608502040884268 -3.11271896877692 0.562337548932586 0.350409666586294 0.656544812735476 -1.65199303490817 -0.0433645070481899 -2.08762184256883 -0.325109561648418 0.247010624556989 -0.146111839673345 -1.63959423173799 0.685384029875192 0.00175342961555694 -1.20339083509955 -0.0475754523124793 0.4598055958424 1.45258172875038 0.530606025163377 0.789162667855617 0.825824328113758 -0.435438013286695 -0.101203924804366 0.22700042367291
[+] Show/hide bicluster #102 motif PSSM #1. bicluster 102 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0 0.058824 0.941176 0
2 0.411765 0.588235 0 0
3 0.823529 0 0 0.176471
4 0.352941 0.235294 0.411765 0
5 0.882353 0 0.117647 0
6 0.117647 0.117647 0 0.764706
7 0 1 0 0
8 0.235294 0 0.764706 0
9 0.588235 0.058824 0 0.352941
10 0 0.529412 0.411765 0.058824
11 0.529412 0 0.352941 0.117647 [+] Show/hide bicluster #102 motif PSSM #2. bicluster 102 motif PSSM #2 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 0.875 0 0 0.125
2 0 1 0 0
3 0.125 0.25 0.25 0.375
4 0 0 0.125 0.875
5 0 0.375 0.625 0
6 0.375 0.25 0.25 0.125
7 0 0 0 1
8 0 0 0.875 0.125
9 0.375 0.125 0.375 0.125
10 0 1 0 0
11 0.125 0.25 0.5 0.125
12 0.125 0.375 0.25 0.25
13 0.625 0 0 0.375
14 0.125 0.625 0.25 0
15 0.375 0.125 0.25 0.25
16 0 0 1 0
17 0 0.375 0.25 0.375
18 0.625 0 0 0.375
19 1 0 0 0 |