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[+] Show/hide bicluster #101 rows and columns.
bicluster 101
Mycobacterium tuberculosis H37Rv
19x38
[+] Show/hide bicluster #101 rows (genes).
bicluster 101 genes
Mycobacterium tuberculosis H37Rv
19
[+] Show/hide bicluster #101 rows (short gene names).
bicluster 101 short names
Mycobacterium tuberculosis H37Rv
19
short_name
[+] Show/hide bicluster #101 rows (long gene names).
bicluster 101 long names
Mycobacterium tuberculosis H37Rv
19
long_name
[+] Show/hide bicluster #101 rows (NCBI RefSeq gene IDs).
bicluster 101 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
30
[+] Show/hide bicluster #101 gene upstream sequences.
bicluster 101 upstream sequences
Mycobacterium tuberculosis H37Rv
16
upstream
[+] Show/hide bicluster #101 columns (arrays; conditions).
bicluster 101 arrays
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #101 ratios.
bicluster 101 ratios
Mycobacterium tuberculosis H37Rv
19x38
GENES Amp Ascididemin_Natural_product BZA Cephalexin Cerulenin DTNB EMB GSNO GSNO_CFZ GSNO_menadione H2O2 KCN Levo mercaptoethanol methoxatin Nam NRP_1 Oflox PA_1 PA_21 PA824 pH4_8 pH5_2 pH5_6 Procept_6776 Procept_6778 PZA Rif Rifp SM starvation TRC Valinomycin Verapamil X_109 X_111891 X_124196 X5CL_PZA
ORF02734 0.441174153351773 0.910443853466907 -0.743308704895896 0.272741324763951 -0.210352968417031 -0.0631775203811672 0.123796547204639 0.107314904821744 1.31649132170482 -0.196638445401749 -0.397677384041016 -1.35277223907997 -0.238578661154712 0.103619894954802 0.670740451615231 -0.826836867519086 -0.449021036399658 -0.0367151454353378 0.451674346400794 0.74334926084815 -1.40076812204435 -0.481854332791979 0 -0.272797818607365 -1.38801285748576 -0.854604899509402 -0.690452646075885 -0.143713172867953 -0.114202701830967 -0.236526743876802 0.721637744689222 0.163396743242471 -0.835689738349405 1.29780822308296 0.381185587852884 -0.0447620010635245 -0.247440957054711 -1.27554952754644
ORF05723 0.309464657366004 0.418946136629085 -1.09186862182380 -0.0268026573580864 -0.232012990701604 0.380783918878115 0.640510202654845 0.319495095592653 -0.115598387442243 -0.0672391837431836 0.433438194750099 -2.05924969313992 -0.134933504255704 0.0508605406459983 0.583146925216765 -0.463274386728365 -0.588163440715592 -0.0763793534597074 1.10764615216138 0.782252097742932 -2.092331117254 0.402929548330806 0.375794964087682 0.363067713793544 -1.32221495503562 -0.127670669053801 -0.543686230915445 -0.192327744748355 -0.237400891353174 -0.235604244852267 -0.642364622996455 -0.871716436786058 -1.02376575239730 0.422316704849257 0.317277347501704 0.637405646987624 0.623092207779931 -0.766703440697372
Rv0257c 0.82633986457446 -0.0631771258234042 -0.997647834529667 0 0.107523103287824 0.780845196999914 0.105640236644603 0.962084608463335 0.250194287341649 -0.76845483287615 -1.11668360467472 -2.59088226427101 0.491345466643946 1.02287510231259 0.723273572442231 -0.895889378521948 0.906508300586092 0.105848065932358 0.494047735434877 0.751674391047306 -2.09440055161365 -0.149930336209204 0.0786025782092285 0.332230318963173 -1.56471621589011 -0.85291958832676 -0.716835928178887 -1.76799832534907 -0.981680059756916 0.601980081358468 0.150005503604439 -0.978727941111514 -1.57204000123539 0.638067981042096 -0.0477602466685143 0.640184337441816 0.173165025876052 -0.73852580651917
Rv0873 -0.390939326629139 -0.395742030873354 -0.607207000484862 0 -0.0806932210862466 0.187033785052029 -0.312754864793308 0.161397223952635 0.674270435728227 1.7850566093902 -0.751677109646132 -1.85041306692134 0.212291076354826 0.678813336799058 -0.860004464412892 -0.639514404322385 0.0638402324979529 0.278012065146120 0.345050639727559 0.0531532645329046 -1.56201679538251 0.0421135687909881 -0.158703941834648 -0.00554986332985618 -1.65438253193564 -0.922132693872063 -0.668233910119439 -0.625813303131742 -0.3670731509355 -0.142739707264244 -0.596815872990723 0.347366265449433 0.254899347478575 0.250861335308268 -0.968393677914989 0.0258082142567853 0.685930921577995 -1.59824055138607
Rv1543 0.307525010110961 -0.263907625002518 -0.578825199948617 0.353968115999044 -0.338846010761054 0.645315066812216 -0.293525294018145 0.544445685889671 0.932312723148304 1.21913869870744 -0.477688318869624 -2.46647424130995 -0.30770603317386 1.29437610034003 0.595630766415567 -0.595957013857855 -0.64339117486011 0.6590143527883 0.437191448989237 0.609851608523095 -1.86245603708158 -0.0188213841931848 -0.015315889622066 0.407115375990978 -0.342509843705809 -0.0468703077717778 -0.614380060919595 -0.667937471407342 -0.135913523949906 0.381657485832661 -0.232098014749799 -0.758129649107941 -1.79284609523953 1.04372140857214 -0.324343720158825 0.73730619433744 1.12191581649323 -1.02345821757768
Rv1608c 0.383216397292353 -0.117649170742352 -2.16456355848217 -0.301090061666904 0.517111973387784 0.19711006655408 0.211065234157912 0.303070498949519 0.969397472216319 1.28413043235565 -1.56134842032561 -1.70209437111170 -0.301099963719917 0.0851191174416292 0.12441643755543 -2.16393264245362 0.191437215447601 0.131683698333545 0.333995676436351 0 -0.775928234541465 -0.0473414715274956 0.660194172178981 1.25849176201697 -1.54384732169344 -0.761788251483195 -1.99948238751210 -0.640279347122286 -0.617296626177006 1.60313527715459 -0.257642070015619 -1.86512308940616 -1.48466251579402 0.200964511200775 -0.325184315378091 -0.0149338243214228 0.354641155867999 -1.81946073113978
Rv2588c 0.737577491632792 0.0751960169843529 -0.82767452184324 -0.154079550642930 0.0741897264866709 0.345366748573995 0.187978597011016 0.289579823654486 0.000546083867649752 0.762882049469169 -0.668780644759494 -1.11815605308362 0.39915119931219 0.325280880649479 -0.0362522760878163 -0.632005447294558 -0.58403189304429 0.704004338313287 -0.186061444385728 -0.755041474265596 -2.25915952637182 0.261586153281154 0.312071709913514 0.203742363293477 -1.19628058591614 -0.47956087098319 -1.09771328985047 -0.993520616539207 -0.852157884560806 -0.355892812452368 -1.07608550323817 -1.47082323503656 -1.424791159538 1.18101593761144 0.0861093352498565 -0.0468009740478447 0 -0.942773278195692
Rv2716 0.261289753883055 -0.600420994735303 -0.273038304092570 0.366614769969627 0.271583253952838 0.669594050455607 -0.269414159832337 1.05973207601861 -0.0630401417011176 0.237512131313021 -0.0392892242949459 -0.974553240304078 -0.279427742739578 0.748465395960543 0.653926394494799 0.0453666898521923 0.476865236176219 -0.114321262238535 0.439910673998572 0.959166462929786 -1.19005528418987 0.0177385198389786 0.19098991560977 0.147977986818552 -0.855662113088305 -0.333990175805109 -0.00456550102198868 -0.331867061865551 0.0453096686317801 0.144396265787855 0 -0.856057282668599 -1.00162376643121 0.657215363511535 -0.199469454018158 0.82364795757241 0.188976790053723 -0.134414177183928
Rv3219 0.160287184503974 0.522206822424312 -1.01278841965737 -0.255797074019860 0.975351086784447 -0.0881810060924632 0.255029412440373 0.196454742324032 -0.00248103552305953 -0.293503362474592 -0.43938606179066 -1.25548460817719 -0.308434161309815 0.0854631201794143 0.198105142533565 -1.19953224596745 0.0622370352339512 0.0186722362354244 0.000880757431303272 -0.198368886271354 -1.71358568753182 1.13844747499079 0.809168067720694 0.729314526221845 0.268572997555352 -0.214824248367045 -0.356541416253099 -1.76766833792785 -0.649743646989225 1.11515511470117 -1.27076125009042 -1.93610745374764 -0.0221860416947419 -0.318334376617253 -0.109633849526281 0.119461417777581 0.082380177166985 -0.996087836810597
Rv3240c 0.749794109954955 0.7558807674262 -0.198905959970436 0.0445840720916979 0.380920856359195 -0.428536966796661 0.168610449221115 0.144332462922839 1.10407131291995 1.68868609758070 -0.0520937585278619 -1.15695869540638 -0.401103161834403 -0.421578597007351 0.0578691794181463 -0.580542966415678 -0.15343200399461 -0.0697412599029517 0.408791568037624 0.280522211086027 -1.30783457583656 -0.297600280306663 0.00130909337506879 0.51781696162634 -0.0435717414339235 -0.157961663557257 -0.817449972432936 -1.38054794651136 -0.126640571870233 -0.0268087024428594 0.159227229692687 -0.208806310186331 -0.569249705721615 0.217784863082515 -0.0411511931037162 -0.158456917429933 0.115814454964300 -0.560895760521098
Rv3248c 0.517147487186626 0.655860091773766 -1.79224437402459 0.059060867731057 0.287402302644589 -0.0174596429215196 0.505275211921262 0.122660741117757 0.265151512229048 0.931982275834971 -0.548860737193599 -1.84963727634706 0.769019979607464 0.629530231353313 0.085109585559262 -1.23000361187279 -0.0986811608018147 0.515532438586762 0.322437461723485 0.277065200504384 -1.86835377611325 0.927145306151531 1.69225688593933 1.6415030032424 0.0870847504240938 0.209697227942630 -1.10001626316588 -1.68919587051103 -1.70505942264047 0.439476182916932 -1.13403794988711 -0.77546042421068 -1.09036537021947 0.178072182599912 0.08592865248091 0.102330289777738 0.182026856064597 -1.14253944351541
Rv3363c 0.583938251527697 -0.160052044545213 -0.659644494848917 0.372529231142902 0.502839208831795 0.414074345472522 0.187089321875826 0.727122788799437 -0.232068345098703 -0.0289678958386101 -0.471841355586544 -1.75228043352786 0.40970048757555 0.197752877212714 0.619571145390459 -0.915922532441883 0.895948224101929 1.17233377446712 -0.319522902926734 -0.00941165593020755 -1.72059019651125 -0.432163437305054 -0.417756815436567 -0.0940097957854764 -1.66943732639071 -0.387941109741672 -0.652503917720143 -0.577975457125202 0.265853045156881 0.689712218940755 -0.41703149973011 -0.777631981887206 0.225122350984004 0.311806049559419 0 0.288681083107390 -0.163853491100768 -0.447725882257072
Rv3600c 0.242155312066500 0.778103735277523 -1.83725021782156 0.0815822210412308 0.414395676387885 0.418203681111325 -0.233047466313475 0.263324631417558 1.47212835324359 2.13415750300124 -0.174250122416832 -1.62948738416048 -0.430558144326666 0.772090587850226 0.693544726566883 -1.20206242779889 -0.927359012566205 -0.00647831881353437 -0.323122650270562 0.149526816298388 -2.65485563603127 0.571566040639533 1.26093678007265 1.06377693936665 -1.35074748075808 -0.620263960250774 -0.951398453577972 -1.37635557288526 0.0092288218662727 1.06748572854604 -0.309532852193347 -1.27656471101543 0.00437607576869698 0.154485220080615 -0.626762952870196 -0.0156211573330396 0.170259011359637 -1.22758783608886
Rv3601c 0.683945120567945 0.496186615654029 -1.85467125065418 -0.0151795629687299 0.626729363687524 -0.303488957453484 0.864776221406934 0.234426783080821 -0.280130723592213 1.01129440404694 0.25270292535341 -3.11271896877692 0.243536717686072 0.562337548932586 0.350409666586294 -1.35595499075949 -0.325109561648418 0.247010624556989 -0.379521330662763 -0.146111839673345 -1.63959423173799 -1.26649043517288 0.051047518075352 0.00175342961555694 -1.20339083509955 -0.120255370411472 -0.740681472598534 -1.06393551229554 -0.0475754523124793 1.45258172875038 1.10555478092207 -1.19927644726769 0.825824328113758 -0.435438013286695 0.420899591298771 0.0439320118127468 0.19417367336142 -0.697276416014124
Rv3602c 0.542544533406336 0.345383201159568 -1.55980105505574 0.0312501677422909 0.567698986937855 1.13743054664628 0.205646534121921 0.301438719365301 0.0199195870127996 0.867181729401822 -0.325788384330848 -3.30729843564187 -0.223446168894487 0.145240183343911 0.757400352523495 -1.14470780034877 -0.118001182984205 0.262658597389927 -0.366728452558724 -0.450557425122554 -2.13790662078604 -0.330358404007256 0.496223406235462 0.457086757041171 -0.386432081262944 -0.323607375523265 -0.819851767447235 -1.27927095598927 -0.828963474226753 0.682151128833932 0.127278723268480 -1.39745539222615 1.55070267181558 0.123295654517449 -0.311949249614999 0.189676535454461 0.0519958253357806 -1.63446992831915
Rv3673c 0.171105869698941 1.56754351030450 -0.6029121209302 0.0382416655044681 -0.582211854386862 0.0194818747431398 0.367174318899234 0.559802910976149 0.529348606043014 0.618960604814672 -0.560810396474155 -1.8605894112875 0.153504671685238 0.804926162728517 0.358560767947475 -0.939460898155376 0.659389476250948 0.91200928962654 0.843109294872984 0.593133902369666 -0.976169065360946 -0.0859276997039032 0.0298576565278885 0.751717604964024 -1.00400360553001 0.098348959960265 -0.463601218730725 -0.54810846049427 -0.171891355267264 0.439472187533503 -0.0218600914015728 -1.12739089084422 0.278949030511985 0.616027119676334 -0.639067696948846 0.471806468606865 0.606212271301103 0
Rv3715c 0.412565200917731 -0.166034490969514 -0.424171701466793 0.851643951417395 0.528180199660795 0.777611652155052 0.398202053283571 0.140512548541003 -0.199850730363367 0.274620071902994 -0.649508373240174 -1.96361849804039 0.558054250829384 0.690793940021158 0.076223677809531 -0.688291672862417 0.325829468317453 1.06778264202118 -0.120595888863181 -0.395792995373864 -1.91042955367648 -0.289206262443271 -0.142448632204396 0 -0.425699690178488 0.0872647651246782 -0.529493092867181 0.221804209321692 -0.656124936361095 0.747813248709989 -0.557214858432213 -0.66470722406738 -1.04246734180513 0.215965426386781 0.3829672678022 0.161104417433152 -0.202762443695135 -0.899278144574123
Rv3716c 0.651647593853773 -0.466586998492414 -0.699868490001121 0.424227495154356 0.525577207213773 0.821298568937613 0.333545198223578 0.438799496101689 -0.304413072422458 0.0368844875450981 -0.357486644099753 -2.33548801391774 0.585822963619358 0.322821197297727 0.526705584828107 -0.585412428430001 0.446881818895536 1.53982442702144 -0.68757077302672 -0.628433554185133 -1.71318227679278 0.128255579813027 0 0.235407448921866 -0.110694530524524 -0.0485990338599905 -0.391572925836183 -0.064900532885101 -0.176897915489812 0.758990302480367 -0.539557420349613 -0.613256854269608 -0.548658558820504 0.274074090116716 0.0115003696402236 0.0888642607567221 -0.43162062968902 -0.593847837393421
Rv3924c 0.57897677908294 0.167796007059811 -0.769774511444145 0.0532129792252828 0.565415769074555 0.101368350213864 0.442724906228826 0.310513913839423 -0.014105900269388 0.0501547622900825 -0.211221314664076 -2.50704352099785 0.0654254597430476 -0.062798959820128 0.099247762391679 -0.527366523449314 -0.00927591434833249 0.493225100694272 -0.421477482689408 -0.316236399262129 -2.4344572403291 -0.154496781908603 -0.0228800693619922 0 -1.91440535202052 -0.413338891457452 -0.452362068552355 -0.477899466488901 -1.00766529281822 0.561191066281566 -0.614413313555204 -1.53092654992487 0.42124205749862 0.086612487311222 0.44537737986502 0.159276960218225 0.09269688500376 -0.404805448461265
[+] Show/hide bicluster #101 motif PSSM #1. bicluster 101 motif PSSM #1 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 0 0.3 0 0.7
2 0.4 0 0 0.6
3 0 0 1 0
4 0 0 1 0
5 0 0 0.1 0.9
6 0.4 0 0.6 0
7 0.8 0 0.2 0
8 0 1 0 0 [+] Show/hide bicluster #101 motif PSSM #2. bicluster 101 motif PSSM #2 Mycobacterium tuberculosis H37Rv 14x4
POSITION A C G T
1 0.6 0 0.4 0
2 0.6 0.4 0 0
3 0 0.8 0.2 0
4 1 0 0 0
5 0.6 0.2 0.2 0
6 1 0 0 0
7 0.2 0 0 0.8
8 0.2 0.8 0 0
9 0.6 0 0.4 0
10 0.2 0 0.8 0
11 0.4 0.2 0 0.4
12 1 0 0 0
13 0 0.6 0.4 0
14 0 0 0 1 |