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[+] Show/hide bicluster #100 rows and columns.
bicluster 100
Mycobacterium tuberculosis H37Rv
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bicluster 100 genes
Mycobacterium tuberculosis H37Rv
25
[+] Show/hide bicluster #100 rows (short gene names).
bicluster 100 short names
Mycobacterium tuberculosis H37Rv
25
short_name
[+] Show/hide bicluster #100 rows (long gene names).
bicluster 100 long names
Mycobacterium tuberculosis H37Rv
25
long_name
[+] Show/hide bicluster #100 rows (NCBI RefSeq gene IDs).
bicluster 100 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
44
[+] Show/hide bicluster #100 gene upstream sequences.
bicluster 100 upstream sequences
Mycobacterium tuberculosis H37Rv
23
upstream
[+] Show/hide bicluster #100 columns (arrays; conditions).
bicluster 100 arrays
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #100 ratios.
bicluster 100 ratios
Mycobacterium tuberculosis H37Rv
25x34
GENES Amp BZA Cephalexin Cerulenin Clofazimine Deferoxamine Dipyridyl DNP GSNO INH Levo methoxatin Nam Novobiocin Oflox PA_21 PA824 Palmitate pH4_8 pH5_2 pH5_6 PZA Rif Rifp starvation TLM TRZ Verapamil X_111891 X_111895 X_121940 X_124196 X_241 X5CL_PZA
ORF05167 -0.364159347156569 -0.417000911619175 0.108907851605240 0.476457670987425 -0.291639633509772 -0.195144442832848 0.118968552462098 -0.250499025370721 2.52656590210031 -0.274681681342369 0.720228571133474 0.370696831409859 -0.694410917418105 -0.294644788610099 0.0750705197510238 -0.212969919291249 0.230561977277506 2.11626653829286 -0.287178914445578 0.0568152101706761 -0.128543521218694 -0.8029073002625 0.468046337005164 0.0906931940631763 0.668894734643539 -0.214469096329744 0.177504415829525 -0.310023646578074 -0.26519743170774 -0.289714510137592 -0.54783008350254 -0.502391988849839 0.146921954662613 -0.618992864004775
ORFD0322 0.109393701701967 -0.0506402611442383 -0.161922760125504 -0.742677870898444 -0.446597284762271 -0.203198911652882 0.114708948020305 0.739108345092039 0.444767378794106 0.0212919707527070 0 0.191605855812674 -0.175568585527272 0.326996153344865 0.586103876432286 -0.0159837660834093 -0.437360618178405 -0.0463741629222673 -0.182888418617866 0.0632901404479475 -0.192115148865903 -0.248460382848065 0.36591885174199 0.300339765005577 0.382135757354749 -0.50160274267953 -0.691698551371276 -0.696658404136338 -0.230265620833681 -0.0307086061997681 0.171934623629104 -0.396529615709031 -0.283317700847683 0.475597043342357
Rv0039c -0.0952484869165662 0.181670360106918 -0.539112931209448 -0.44370057197233 -0.0466249200007894 -0.487486548461972 0 -0.0466249200007894 2.37152075774192 0.0183247690708913 0.876050574176216 0.751160076618491 -0.199408844063828 -0.0466249200007894 0.678574549286384 0.6700468478018 -0.257889300844633 -0.0466249200007894 0.0712200143173845 0.350216477738373 0.208424196638757 -1.11105970815561 1.29152465741537 1.44289614070335 1.54576850302697 0.279606124856944 -0.0466249200007894 -1.97802926339768 -0.550499891996163 -0.179032586419464 -0.716104437607733 0.136796379729176 0.505980744362352 0.262263876653714
Rv0079 -0.414877031572480 0.217743775454805 -0.169670497574143 -0.087632584822474 0.076240467795952 -0.260813997787990 0.398279100977185 -0.302000827277442 2.15555332953084 -0.201788799170507 0.344751785990616 0.198460404415031 0 -0.449069811521581 0.080741165123258 0.183523615580950 -1.00455778381547 2.02936279845966 0.356405613571116 0.509433585127362 0.418874863029946 -0.213491900782709 -0.221872135761378 0.839998089287402 0.526537793364136 0.103042199014307 -0.0208825818282498 -1.10135122702936 -0.27396844007265 0.257874530135853 -0.315427222291131 -0.145974358931584 0.253002910118081 0.484539161168162
Rv0080 -0.0927754504757956 0.090867283193693 -0.038685119020386 0.225550257142247 -0.202166676288959 -0.0613509794502842 0.089962506103184 0.0633741776498057 2.59706918431432 0.451233303537139 -0.0276129037996219 0.254241204819407 0.087415396303293 -0.490389349440637 -0.144008762099822 -0.165629577129574 0.00431555040807111 0.821156001070691 0.210960834235915 0.236258726809576 -0.282224333740457 0.512940187213356 -1.19055777839066 -0.327050870143219 -0.564845825703759 0.334525897317927 0.0890468597173217 -0.807676204478207 -0.384205966457366 0.0263045349396109 -0.0243987241858787 -0.210426788501522 -0.446391653745224 0.400130574501736
Rv0280 -0.250518448949925 0.00203224124501743 -0.104122985771826 1.17320911809256 -0.568958030858636 -0.948204981767938 0.367568439177280 -0.99794295228775 0.848048042504901 -0.147809886380774 0.285192973941868 0.250171840110606 0.343447748629464 -0.0373221040865628 0.377523365462093 -0.361867085327755 -0.968591842419935 -0.373852510122359 0.130238333886551 0.619369074154847 -0.180358394979483 0.246466961451328 0.21753016308432 0 0.91040861253478 0.249646270260561 -0.5239128883628 0.0760373580747164 -0.243126987178017 -0.580077205817656 -0.415082993063285 0.132276402442146 0.0751672330966387 -0.0648868824232892
Rv0569 -0.0371288686454626 -1.01438298853663 -0.203833408031696 -0.133984126936667 -0.205637212843858 -0.260297654968029 -0.301603986721119 0.846779636363115 0.984820226815192 0.116285614888509 -0.198397644639077 -0.515777206575043 -0.924822367774881 0.543862848379077 -0.341839507195868 -0.246983201093726 1.43435121923435 1.74775453427891 0.294885453467019 0.771581055202699 0.337387682871803 -0.84532029363699 0.224098085393124 0.0237282376617158 0.952602780796213 -0.0370497784928990 -0.118371379999388 -0.672403887814363 -0.213401777049069 -0.0700527267433786 0.0541006624848093 0.0260943714959680 0.183762998949677 -1.13693067450601
Rv0990c -0.494679184441136 0.385145589396496 0.0440443442948876 0.488722292706305 -1.09851639253070 -0.312882011995624 -0.0722713855590623 0.277193485650344 2.53991941591657 -0.600160717563827 -0.104760822905306 -0.48484942725527 0.116120566408447 -0.595304420411946 -0.32130236751214 0.219452730559062 -0.58217045525172 0.418955006771648 -0.0492501628625633 0.267167073772161 0.563155234192517 -0.0820282741973046 0.646315520428992 -0.1435363630763 2.31465370020613 -0.611402869039983 -0.0884481917382756 -0.864416081295321 -0.0566375299388247 0.220473806747603 0.151742612008669 0.155004015629448 -0.109275567570674 0.257282146783752
Rv1733c 0.0865024411047041 -0.354618938243154 -0.262009805146849 -0.0301230823486677 -0.589260295366701 0.0427267440722003 0.493732970809098 1.26765459526911 0.389854223481267 -0.479636791070113 0.06215608435626 -0.59767441897259 -0.213849828591524 0.249963700497544 -0.00334710373777778 0.733445769818906 -0.891848346127716 0.945525564117424 0.0212090076723618 0.70443167701788 0.311758832632127 -0.414872824446422 0.968493133024021 -0.0466003803054717 0.322411557719052 0.0160999551479433 0.970145298106252 -1.18023697253696 -0.229134764463086 0.430000152827819 0.288425083987974 0 -0.236472195927383 -0.257037815223712
Rv1813c -0.234718421544128 -1.21777848880515 -0.140127415704207 0.505131380481980 -0.331694042199818 -0.386107636485475 1.44909852749422 -0.195839354616865 2.48169167501436 -0.391380499642454 -0.328675557469533 -0.63369934539263 -0.909239122465248 -0.379741925627564 0.0813516428991721 0.176029519697596 -0.987421604158035 0.937304676982779 0.389577081665888 0.5141011480668 0.197224200533706 -0.685490453673515 0.237197401938489 0.0966810229862542 0.6235123154106 0.342723883769272 -0.134287328948027 -0.109925131577896 -0.131663172370538 0.73305124683713 0.673039642259661 0.509112000899475 0 -0.778758341199575
Rv1996 0.28032474525034 0.256165716310071 -0.598406873781992 -0.470498215678992 -0.374566793822181 -0.511663943276897 -0.129019430911938 0.287764484352887 2.14756781699504 -0.304077767562350 -0.341785220074419 -1.16565326924277 0.267930036683661 -0.733874379178548 0.197924145991110 -0.349294003165356 -0.793587282638836 0.847856004289386 0.49345651214027 0.42337801367625 0.348120203101335 -0.027824127982563 1.69557949144544 0.304211557872481 0.83233252657492 0.919648435563146 0.057019080416093 -1.70413961278387 -0.224201357496596 0.146048269502461 -0.0890335301188625 0.582070425426537 0.315839511559841 0.1277590626095
Rv2007c -0.497525877237249 -1.01033577605029 0.0344999411250418 -0.368279419921816 -0.456647694060453 -0.304955361512637 -0.228909768219065 -0.0204183344772545 3.09886024415356 -0.189334017540454 0.131245141309404 -0.562577884985169 -0.759286072997735 -0.472060741857117 0.105451345106379 0.112547852510315 0.0127153175394862 1.54206542669879 0.154599246195695 0.37679727020187 -0.048700069988621 -0.675638965478676 0.20443508536033 0.437170225234879 0.0262792430279792 0 0.170890075982882 -0.945655383485352 -0.134612204861702 -0.59693410485825 -0.297287036144329 -0.0126566544263094 0.0237803496715005 0.367726743413994
Rv2030c -0.218373990938861 -0.0155937413056394 -0.150591874860934 0.441222399741653 -0.476314733995949 -0.277193757205040 -0.139766525987389 0.178466568048522 3.64017050886475 -0.485610121635771 -0.10297367280019 -0.336526156636394 -0.10729949843021 -0.133083062142957 0.0592521728361296 -0.139400690298486 -0.653134463314198 1.61311755951069 0.545775433725016 0.796931933697392 0.417044328001028 0.0918592274772417 0.524317557494709 0.179894673883924 0.0111750723753308 -0.201435430536082 -0.476731103837544 -0.899758843848432 0 -0.0660332025384698 0.306195288860712 -0.0250459647589326 0.293710188521301 1.86899366376214
Rv2031c 0.0455565645848851 -1.16691736838871 -0.0250989640552489 0.0751525683660877 -0.917005221490758 -0.472073959980913 -0.152459205056996 0.204786459521184 2.70944125676854 -0.122748138071164 0.088307202658155 -0.453202132245977 -0.803419377984012 -0.765770843646766 0.366312338091653 0.00867057080586297 -0.689746258304328 1.69125449991011 0.455486431001160 0.773603125450732 0.336234463156223 -0.364790222322138 0.177111483553083 0.211045588336408 1.04074254190513 -0.247486847262604 -0.471792863539627 -0.893398800588082 -0.0950153458092228 -0.237443620322012 -0.122085570927932 0.0666742839106309 -0.00832794341570695 0.85992410593636
Rv2032 -0.238721804337508 -0.152560119329045 0.173619885285702 0.34167578059951 -0.980497093041687 -0.0365917211444579 0.093973867869015 0 1.97680675943952 -0.125844813460902 -0.00735232230930707 -0.264638803308989 -0.138039640785918 0.267121749322676 -0.0762909649239882 0.392321213446828 -0.153753520980936 1.95685910084834 0.517488115015468 0.607715871321747 0.451848669522249 -0.263295461560011 0.329787461704659 0.346861691878438 0.0901113754477528 -0.199699230023139 -0.521348421195819 -0.919801837732567 -0.0199782777126542 -0.117152011194907 -0.132765197030223 -0.145257699706363 0.0583910357137318 -0.290158573174508
Rv2058c -0.282250509171502 -0.097310114157937 0.0551566451231531 0.620268914578023 -0.0209779903606565 0.103426473255048 -0.00852848408549156 -0.131655732865373 0.498393111685561 -0.321809806048972 0.259396758377088 0.393324138405949 -0.191895335327453 0.176201340552295 -0.00764522533737111 0.216615934467205 -0.509525854900942 -0.0288889244649819 -0.289877613617237 -0.159501489264467 -0.443107414253081 -0.041488364852348 0 0.250477349218736 0.155160027528163 -0.213005780238417 -0.555781704064443 0.462689672839757 0.0435357475203183 0.355908539416576 0.580939479860445 0.0574837579954861 0.171429150051720 -0.55805487871039
Rv2253 0.0659044362273127 0.097780893285654 -0.138673326215812 0.522254595545608 0.228607324132244 0.211000798504084 0.126169999816793 0.373457106489255 0.54908779033814 0.136034112559027 0.115531259908254 0.573196934227995 0.212679217277002 -0.756146460106753 -0.113230654959108 -0.374551269849555 -1.72222322387757 -0.249125666726745 0.0863039508268442 0.0407927546243744 -0.399320074734267 -0.222514315061706 0.222433889007342 0.676979448556402 1.38562815916469 -0.130844741759486 0 0.211814861357074 -0.17840953344852 -0.499855668783066 -0.0270730360688816 -0.505672482834924 -0.0268794798086041 -0.0617071976437141
Rv2623 -0.275668916627737 -0.516664050169562 -0.142943802639862 0.379368010726188 -0.672196315898189 0.123667349842586 -0.0698258024803127 -0.0838952514696795 1.51650707583736 -0.294708861976539 -0.096246941267868 -0.628105033179561 -0.59910309131368 -0.54418759639122 0.309741600047038 0.336572610551941 -0.385653624555765 1.01001765723981 0.466159659611922 0.696227447847284 -0.00625607922648103 -0.435750614364312 -0.32307871312154 0.254003752120189 -0.733219865983745 0.138546981039596 0.0737378553272759 -0.791766507265435 -0.538363946834122 -0.0484459694818108 -0.723270755992146 -0.305148513130500 -0.609865962156602 0.792514321098236
Rv2626c -0.326126369374620 -0.466404228058646 -0.0523946058838963 0 -0.69370486330506 -0.304604232427565 -0.0775263910619443 0.0231259123782174 2.88896036487648 -0.625628506058018 0.00247542284134346 -0.430867143097666 -0.379163926326075 0.0497809269726089 -0.216943446174680 -0.231910620033221 -0.883531810007838 2.4627311752827 0.354045226123649 0.701072062241651 0.238388674378754 -0.543925064908192 0.155664816380841 0.143666237802003 0.567829589808781 -0.457105836478006 0.299036566934182 -0.48951512597115 -0.200731002418701 -0.184891593413702 -0.0333521690760016 -0.282662191375914 0.133255826177573 -0.226348887329696
Rv2627c -0.209635692217551 -0.801262219557464 0.200035821480890 0.115079539606934 -0.0520176477286557 -0.145548379457841 -0.0275746129223325 -0.0887315658348358 0.954071353309742 -0.254074130919489 -0.285876985270648 -0.804034821333467 -0.394213296954744 0.291244588962643 -0.0826309139518785 -0.632416179654676 0.598454792283999 1.53443407041756 0.180257664825267 0.191642985035633 0.0127475107308020 -0.355752929584991 -0.0280203791266691 -0.0160631285952684 -0.790528387683626 -0.0692201429746863 0.150590922897506 -0.836660821984434 -0.129756543366337 0.0460108881248966 -0.80681545788768 -0.222423204626404 -0.526072873590015 -0.210813317575364
Rv2628 -0.168707894412767 -0.406952125424808 -0.140455201202781 0.202678204392724 -0.813590023585519 -0.0292820578413301 -0.0367990391662547 0.0722686455002727 0.643063342326032 -0.31303225241771 -0.00299071627553441 -0.388654280413418 -0.475592454959273 -0.115039103091536 -0.195248638108947 0.0938116459630249 -0.142004162109543 1.86157513280080 0.417942993298498 0.83710655276034 0.0368336493914088 -0.467494742692096 0.370954721310301 0.00825215851645092 0.537481206841057 -0.497811038095951 -0.351047385633655 -0.831601259869575 -0.00515673734140156 -0.00345932140796291 0.317049109952149 0.0371367589662314 -0.421424620569981 -0.650196906444972
Rv3134c -0.0446639260396903 -0.788743676539084 -0.115182936840280 0.248369449591274 -0.379949033068275 -0.0683187509208116 0.130501534313991 1.01237399316974 1.74333567293254 0.146265396599378 0.145100558758547 -0.561999768557653 -0.826604897551143 0.366883031757893 0.116887688231123 0.156227980495004 -0.168002902653091 1.31398517326115 -0.338548423136587 0.276939089477495 -0.227528109410278 -0.354875235431708 0.608742394288131 -0.0729131569913518 0.440195426229607 0.154714087696262 0.503947821121842 -1.13090582281876 -0.0890937292413212 -0.101902199877460 -0.261528051509921 0.0808772740787346 0.390080041749103 -0.205608760094874
Rv3341 -0.177501573117827 -0.785499483627534 0.0958942959077372 -0.30340127151033 -0.542789649436215 -0.00567838515009872 -0.142377528526575 -0.0910766070249176 0.024583932681756 -0.285102260325014 0.369147214599152 0 -0.376002177483268 -0.193309017368123 0.427459136369749 0.144247055316029 0.360764439858394 -0.200881527481458 -0.135341801856206 -0.00921314076479069 0.191175859430930 -0.295724249991791 0.81689788862211 0.563655596047789 0.197685404441868 0.199961077130746 -1.03403549952508 -0.320304929019362 -0.189525892632179 -0.217619111589917 0.232452872418155 0.0160885309982355 -0.066554802106316 0.4584385325679
Rv3342 0.175142927930739 -0.233074574198326 0.0231928953250864 -0.202972157483350 -0.697020585108429 -0.0850695552888805 0.0197444023118537 -1.08840191430078 0.340011249491070 -0.402609514341591 0.0512156376083552 0.393051379423596 0.0908119295902311 0 -0.0194408089415253 -0.0178405216916611 0.73767516650146 -0.260520976458514 0.210485785152337 0.325634473758652 0.324656428717119 0.0491750107585323 0.351301320541657 0.325321814428563 0.0685336226004921 -0.0297658815523367 -1.12573299343585 0.355094673882922 -0.176906369376171 -0.55456698295891 -0.381848218889512 -0.0298529334112036 -0.274615718041808 0.579547991489892
Rv3463 -0.00339904970779712 -0.334701383335668 0.140758938191189 0.207404773069719 -0.414146907115505 0.0989285237763705 0.359958722588032 -0.267484993186958 0.0294174812903196 0 0.282274189542653 0.122258252141743 0.107126911945650 -0.429090101842088 0.549216425060843 0.0423255398241182 -0.642951184462448 -0.332511958973403 0.600883907328762 0.597893007352759 0.265883049736598 0.187810584673060 -0.488228522657811 -0.272574284667413 -0.611161896221033 -0.0160962872856044 -0.921096211336506 -0.50370255019201 0.178443527019672 -0.494467495296544 0.0954999938303448 0.19372980718139 -0.374251568157676 -0.0309525133540245
[+] Show/hide bicluster #100 motif PSSM #1. bicluster 100 motif PSSM #1 Mycobacterium tuberculosis H37Rv 18x4
POSITION A C G T
1 0.615385 0.153846 0.230769 0
2 0.076923 0.076923 0.769231 0.076923
3 0.076923 0 0.846154 0.076923
4 0 0 1 0
5 0.153846 0.230769 0.384615 0.230769
6 0 1 0 0
7 0.230769 0 0.615385 0.153846
8 0.692308 0 0 0.307692
9 0.538462 0 0 0.461538
10 0.384615 0 0.615385 0
11 0.076923 0 0.923077 0
12 0.230769 0 0 0.769231
13 0 1 0 0
14 0 1 0 0
15 0 0.769231 0 0.230769
16 0.076923 0.461538 0.153846 0.307692
17 0.615385 0 0 0.384615
18 0.615385 0.230769 0.153846 0 [+] Show/hide bicluster #100 motif PSSM #2. bicluster 100 motif PSSM #2 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0.125 0 0.875 0
2 0 0.75 0 0.25
3 0 0 0.375 0.625
4 0.5 0.5 0 0
5 0.25 0.25 0.5 0
6 0.125 0.125 0.375 0.375
7 0.125 0 0.875 0
8 0.75 0 0 0.25
9 0 0.875 0 0.125
10 0.625 0.25 0 0.125
11 0.25 0.125 0.625 0
12 0.875 0 0 0.125
13 0.75 0.25 0 0
14 0.25 0 0.75 0
15 0.125 0.125 0 0.75
16 0 0.875 0.125 0
17 0 0.875 0 0.125
18 0 1 0 0
19 0 1 0 0
20 0.25 0 0.25 0.5
21 0.5 0 0.25 0.25 |