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[+] Show/hide bicluster #97 rows and columns.
bicluster 97
Mycobacterium tuberculosis H37Rv
19x37
[+] Show/hide bicluster #97 rows (genes).
bicluster 97 genes
Mycobacterium tuberculosis H37Rv
19
[+] Show/hide bicluster #97 rows (short gene names).
bicluster 97 short names
Mycobacterium tuberculosis H37Rv
19
short_name
[+] Show/hide bicluster #97 rows (long gene names).
bicluster 97 long names
Mycobacterium tuberculosis H37Rv
19
long_name
[+] Show/hide bicluster #97 rows (NCBI RefSeq gene IDs).
bicluster 97 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #97 gene upstream sequences.
bicluster 97 upstream sequences
Mycobacterium tuberculosis H37Rv
19
upstream
[+] Show/hide bicluster #97 columns (arrays; conditions).
bicluster 97 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #97 ratios.
bicluster 97 ratios
Mycobacterium tuberculosis H37Rv
19x37
GENES Amikacin Amp Antimycin ARP4 BZA Cap Cephalexin Cerulenin Clotrimazole DCCD DIPED DNP DTNB EMB Eta GSNO GSNO_KCN INH KCN Levo methoxatin Mtm Nigericin PA_1 PA_21 PA824 pH5_6 Procept_6776 Rox starvation Tet TLM TRC TRZ UV Valinomycin X_109
Rv0460 0.170408559557770 0.417127325224358 0.201768143043181 -0.784008830174895 0.163036901569294 -0.602836383181812 0.597469625806192 0.386413969199384 -0.101970979434376 -2.34650379463935 0.165439122081003 -1.68390326361290 0.688027422861371 0.950027978562856 1.03537723207605 0.115808642927861 -1.59255843306801 1.43038560545922 -2.15984320594384 0.426543185711045 -0.0840592841078114 0.911094239829414 -1.03036932165699 0.197982487496609 -0.0162854771874351 -0.0160618123215454 -0.124399843003675 0.570047592816451 -0.840596864933274 -0.516691346954172 0.803460086904772 0.385401298983971 -0.476153247379073 -1.46529663063513 1.30854989354539 -3.16682142797331 0.978423093496621
Rv0533c -0.215362138041856 0.614341406156157 1.11712445060733 -1.07488831398556 0.147694750537675 0 0.218408170568338 1.18658263261705 -0.308367760916616 -0.684647887375905 0.244718783078601 -2.83180260420228 0.154453230797144 0.530485842726043 0.903481738211628 0.378599574156125 -1.09565353309436 1.20214775029386 -1.09162610158769 -0.230264831403538 0.833958786785223 1.08888690171249 -0.703026650724921 0.341773251120319 0.373735396967863 -0.880824829386912 0.710451279571007 -1.28858602213741 -0.196926289213256 -0.865568683325425 -0.498904146643346 1.02016448850663 -0.434118275185479 -1.53675922614892 1.16076852398388 -1.52736630000705 -0.0221116855677378
Rv0685 -0.602317285389162 1.42531441416103 0.224700628841951 -1.33404490791563 -0.556387993925503 -0.182760196117903 0.685817783515141 1.00247334602357 0.250989542031098 -2.43176887215467 1.23904293382102 -2.29843858644075 0.782249545075671 0.580903739284857 0.631399539333476 0.969383644373275 -1.29015889721768 0.492464511544705 -2.73761508428274 0.619502624287814 0.915057625647108 0.854483456502913 1.3879054760764 0.43776872985383 0.582436664700459 -1.50685796840092 -0.0412320930486902 -1.12680224872551 -1.30066544404447 -2.05170976648955 -0.560416980743915 0.798925809207871 -1.23275743441333 -1.35246774872795 0.716098215027517 -0.205091552812148 0.431493420049096
Rv0890c -0.500864862309138 0.324537694615357 -0.00817856463756918 -1.58044123273005 0.670844381706175 -1.03161428637606 0.496239160814103 0.179776249107075 0.126919380732185 -2.22785408026294 0.866858166906742 -2.31985022765091 -0.255815541949052 0.466357991132611 0.0993710634982673 0 -0.889401492589185 0.274685394900225 -1.75182621456312 0.322103005715270 -0.0143584157953464 0.943517938587683 0.0290014900133012 0.249695307444001 0.381174715913083 -0.93058747627474 0.884616623689067 -1.11658493433863 -1.03552019779198 -1.03891894395413 -1.80031073793143 0.284701347571133 -0.182341889173304 -2.42351379348825 0.594807449943826 -2.80861973129907 0.520257296832136
Rv0933 -0.451433724465596 0.447629589365872 0.120403915960512 -1.90975538598238 0.157680748015876 -0.341967689800088 0.414706652909311 1.06170150959728 -0.231969515171989 -0.615865045920755 0.304688129859209 -2.03577103764181 0.496924644728176 0.74694746662885 0.783768631682413 0.361466437110101 -1.48143910037804 0.315557299320969 -1.79651359508405 0.972409051324294 0.207934363675321 0.844626292425463 0.632805568071032 0.0108884753263779 -0.308818533951278 -2.58906748320967 0.371472706600493 -1.62040018949593 -0.458402012853697 -0.0346413475281763 -0.671685871340873 0.570639892807072 -0.454241859368658 -1.70086612711981 0.498358374194159 -1.33403965112436 0.934953057398014
Rv0935 0.144549197796359 0.638195574069839 0.222791125176795 -1.57961027738412 0.613005556547431 -1.45326259164889 0.580973502855643 0.198168592151616 -0.131922067271161 -2.29125222328704 0.63627360015782 -2.26325553610106 -0.224132729926475 0.647314814529506 0.713049459477982 -0.00676858824632842 -1.86294218580845 0.985869383307111 -2.15593385451569 0.822668940234089 0 0.729522183284883 -0.086060496174816 0.477178754997318 0.0338215044026156 -1.51713092304984 0.418908278013695 -1.11777745984818 -1.70510673451353 -0.78868939253668 0.445588943782736 0.290396030539225 -0.355570374212969 -1.80456681244865 0.7880216504403 -2.34936921019406 0.59555023535785
Rv1175c -0.422463527806723 -0.0104172738770624 0.740019711056688 -1.19005472650168 -0.116802621591288 -0.433456491371863 0.509315842384548 1.47209054283797 0.292676600323034 -2.22379926305522 0.95221299543448 -1.53073337606226 0.591200314092004 0.653213959098246 0.422942912980409 0.525044753624239 -1.15569236215703 0.845260144041068 -1.72236481156580 0.314776717926264 0.778222214783506 -0.168786895340729 0.463694786874927 0.667362169544526 0.989660060596457 -1.56139975918045 -0.007074486688532 -1.74616638521636 -1.52842701484615 0.0122583474498674 -1.19505172048045 0.254792338867622 -0.712606113136155 -1.80685760414893 0.0128252229032368 -1.94904551733703 1.02993306310349
Rv1611 0 0.470704991905326 0.693885284288442 -0.794690272265497 0.106128315047509 -0.104398850541597 0.184801145606677 0.196769598994067 -0.144199759112979 -2.60211647869123 1.11626859186331 -1.71906139463525 0.174309240115479 0.879018500974774 0.99758351135722 0.299114476256748 -2.13857528045818 1.62643487098985 -2.07447109464471 0.164540999105858 -0.0122107336603491 0.629855263964948 0.128371280779451 0.107726823944916 0.299252712526233 -0.981417811679806 0.664520989589138 -1.31850133935693 -0.587942573738692 0.190270388003823 0.191394278206805 1.11250026785926 -0.875073280620125 -2.27475803403716 0.792906123965526 -2.20207356940018 1.00921016966759
Rv1614 -0.607624564218457 0.47207230493386 0.476486005158897 -1.30390132828753 0.755455759930257 -1.45371364676856 0.318430406033494 0.228651359047075 0.0875031416405018 -2.43618607514247 0.423132115528764 -2.28977104766795 0.414145152683785 0.0313414904462396 0.487877104548229 0.775854719996583 -1.48463029411621 0.873373683007156 -2.45353846398898 0.372904366929968 0.455199058299 0.725595068825721 -0.0769937565848263 0.151456808867107 0.501324682623298 -2.16617387810832 -0.119636943419191 -1.16370261386038 -1.43225417673387 -1.16772936493887 -0.787361259143596 0.49237725182734 -0.510342382249813 -2.39379671615661 0.65987636248204 -2.2245657925669 0.589998024522919
Rv2048c -0.898673464596136 0.811780466994139 0.358642182120839 -0.702178482785083 0.164063112430359 -1.85526406008608 0.251549242831131 0.516819336504419 -0.66236997991699 -2.82203551566556 0.702241727822764 -2.46430260533344 -0.380887348388177 0.399401722391815 1.46459694040693 0.689650808193736 -1.31783674180573 1.66646421997848 -2.20468132298095 0.713733181235397 -0.363872024620744 1.05170194833327 0.394322588038847 -0.119802469223926 -0.159266218909297 -1.02280529061659 0.0523591468848262 -0.664289560397518 -0.425274200909292 -0.99163406501727 -0.635725866377759 1.54571745160802 -0.614879444899013 -1.51787615728405 1.26816853089391 -0.674452689464897 0.232127380115372
Rv2066 0.152095904010314 0.472072693797706 1.03727343898568 -1.55559007358222 -0.63073561311165 -0.138826844614664 0.117554768616172 0.0297217716899464 0.426674505415172 -2.53293361392876 -0.0997177690262416 -2.21191206769830 0.284910772895061 -0.133677294134724 0.121832237006716 0.720630424620577 -1.04788814681033 0.113297337021021 -1.46788897429092 0.392081225674918 0.501058874880938 0.943223865498228 -0.377870570936914 0.337574696474371 0.201875671929925 -0.996052273989286 0.757265704374202 -1.45419759131278 0 0.155707512569966 -0.598131084963139 0.246788285783932 -1.48902770642138 -2.40479411566618 1.38689324307619 -0.708932154273677 -0.66228828886848
Rv2258c -0.811090187378956 0.534667858524767 0.475044512857053 -1.16481841119311 -0.0617886918059116 -0.202273966703792 0.370773798814857 0.376587238529517 0.00637269086119898 -1.17782956638536 0.270812461735059 -1.86146458274345 0.128271479242276 0.523886567785951 1.72825642222501 0.229783851690037 -1.04110306774125 2.01845143881996 -2.72426686774499 0.394474954566228 0.206081048129738 1.01276155572373 0.87080368183362 0.393989575342328 0.306729839020849 -1.61327945423563 0.290620136765491 -1.34774624587465 -0.131860516643538 -0.355380706751175 -0.298478830437817 2.21646904910534 -0.898724275928741 -1.78330315522568 0.807669028617141 -2.36606977270278 0.178281907837450
Rv2259 -0.483608449828955 -0.82921872685684 1.07397267959771 -1.05029745072453 -0.790697600802318 -0.689575152939583 -0.538987093367298 0.165158961760748 1.17813349592925 -3.37529212219704 -0.331233758362748 -1.97354826977017 0.587933313291826 -0.0423570140935408 -0.0228732919767033 0.437186353636733 1.39314433533713 -0.142543826575360 -1.36746025799194 0.0145297224581073 0.70015178282515 -0.458362146785196 -0.140950955434173 0.568564028334374 0.767004332749586 0.358887459659591 -0.426601700148698 0 -2.4579164384429 -0.100620619545210 -1.12792665018739 0.133955939364290 -0.683073383430794 -1.25887267356598 -0.370641652917452 -2.43761658828154 0.503911619948013
Rv2571c 0.0795939586384467 0.158663387544431 0.371950745077863 0.597675814602614 0.952795242327023 -0.87827537095214 0 0.270333071497955 -0.34990941953672 -1.46411540191103 -0.480647791115509 -1.24205594828577 0.221563750099158 0.453970395455413 0.90761640969046 0.532130970318225 -1.56335435224321 1.10333727379440 -2.28546677939373 0.160351687851954 0.433967709501536 -0.240670713160631 0.346014013667941 0.394634805815751 0.0186589369405091 -1.03911976126189 -0.215087424005119 -0.979134100644818 -1.24284261956300 -0.183055562729839 -1.35874478459295 0.838669058423279 0.586064623704078 -1.71281148717746 0.405950983723933 -2.16385540681894 -0.0193978481059944
Rv2882c -0.366086236935409 0.841570019805337 0.735219652317459 -2.05187115388207 1.27085687174360 -0.137822472953612 0.1409197754155 0.762964579432069 0.140141987748397 -1.14720866440654 1.10242482092306 -1.45525071867427 -0.503182823097299 0.655535359509662 1.32393591447474 -0.287487303392407 -0.549220725047049 1.03408619273796 -1.11395919150892 0.266946593917723 -0.591126605783909 1.57100588199307 0.243141734551808 0.877196330950712 1.2164206614029 -2.23122652202558 1.64071750787672 -0.946078749305796 -0.174194266293509 -0.441116563751705 -0.521813771974997 1.36835932345732 -0.64695594675244 -1.79946387176981 0.656473219669728 -2.72241028355637 0.473392904764216
Rv3031 0.353235682907494 0.20291423586589 1.13813541944349 0 0.670880811245628 -1.42909604701284 0.549620434991735 0.382341981676309 0.130896623960491 -1.53155423769262 0.820423150368814 -1.30387131986058 0.438475956654472 0.382639219143627 0.0467904407282628 -0.0699850014170255 -0.814256576306336 0.947609022652867 -1.68229149358295 0.228639651771996 0.889330984587573 0.311478127202588 -1.23101643052914 0.342083261137566 0.234129075211998 -0.276035233483758 -0.605241148974585 -0.519181740997233 -1.06482783535303 -2.08231332897397 -1.07063491223920 0.607047812211845 -0.545626141825338 -1.07410705536261 0.250490212164349 -0.0136295668230601 0.122284966311455
Rv3291c -0.350459948128884 0.373500746031440 0.349200401183864 -1.51108005420305 -0.183730166385873 -0.228455493913216 0.125058798218903 0.299534292960103 0.179654803337507 -1.97291421058423 0.213747957867916 -1.83360110831408 0.214146499914228 -0.136355256966903 0.449990591275318 0.627480719476262 -1.46273548144605 0.209201283365065 -2.33713929973298 0.00577007932948066 0.572818316237032 0.271960516670109 -0.134193494959012 0.718128419428658 0.756904537517142 -2.42575095692734 0.481813497583858 -1.35844115671371 -0.87979110473762 0.541730042381224 -2.31759384562772 0.317238119415928 -0.317088327473724 -1.46563397411543 0.332237200412689 -3.18533020023314 -0.0329179213423381
Rv3793 -0.610832213751737 -0.0227475864731620 0.63403992657187 -1.02479301431440 0.102153414172514 -0.518815071621477 0.469831690112402 0.345035954627784 0.144036821127669 -1.21019903245469 0.169090961869078 -2.80954969240114 -0.191738123659036 0.312448260016477 0.391547826507217 0.456735356415544 -1.73393807171107 0.878772881290666 -3.25867601734175 0.165639382973707 0.192321234249635 0.0834414773826762 -0.178591975916307 0.343749273247006 0.226511632516512 -1.16667803881055 -0.253062214320634 -1.29765086040776 -0.75079986516902 0.00935835534850893 -0.214682122958064 0.161169913642987 -0.83121178224128 -2.93475781628924 0.209019812074582 -2.65163434569158 0.230483695922569
Rv3823c -0.386908707316573 0.624043316698691 0.594932034898824 -0.356016528697508 -0.243816506970067 -1.12036457145603 -0.169181324155145 -0.408729294090845 -0.0626510197797139 -1.85489166861422 1.12095238275683 -0.710299196720685 0.213054263207831 1.03346624101834 0.332746636645771 -0.0613653938063922 -0.604260459236608 0.514546546996612 -1.58865451880898 -0.249715534482370 -0.325599080011403 0.276479824951225 -0.551233500198003 0.206951186483024 0.723690678433154 -1.18682949623021 0.655215761577165 -1.82911281849660 -1.55143604868490 0.417572079407363 0.734764240614746 1.60204905978291 0.0618947584460808 -0.241738061709136 0.240354920674906 -2.22455718596532 0.905899303249043
[+] Show/hide bicluster #97 motif PSSM #1. bicluster 97 motif PSSM #1 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0.833333 0 0 0.166667
2 0 0.833333 0 0.166667
3 0 0 0.833333 0.166667
4 0.833333 0 0.166667 0
5 0 0 0.333333 0.666667
6 0.166667 0.166667 0.5 0.166667
7 0 0.5 0.333333 0.166667
8 0.833333 0 0 0.166667
9 0 0 0.833333 0.166667
10 1 0 0 0
11 0 0 1 0
12 0.166667 0.5 0.166667 0.166667
13 0 0.166667 0.666667 0.166667
14 0.833333 0.166667 0 0
15 0.833333 0 0.166667 0
16 0 0 1 0
17 0 1 0 0
18 0 0 0.666667 0.333333
19 0.833333 0 0 0.166667
20 0.166667 0 0.166667 0.666667
21 0 0 1 0 [+] Show/hide bicluster #97 motif PSSM #2. bicluster 97 motif PSSM #2 Mycobacterium tuberculosis H37Rv 20x4
POSITION A C G T
1 0.6 0.1 0.3 0
2 0 0.4 0 0.6
3 0.2 0.7 0.1 0
4 0.2 0 0.7 0.1
5 0.1 0.6 0.1 0.2
6 0.4 0.2 0 0.4
7 0.1 0.1 0.3 0.5
8 0 0.6 0 0.4
9 0.1 0 0.9 0
10 0 0.6 0.3 0.1
11 0 0.1 0.1 0.8
12 0.2 0.8 0 0
13 0.6 0 0 0.4
14 0 0 0.9 0.1
15 0.1 0.9 0 0
16 0.9 0.1 0 0
17 0.6 0 0 0.4
18 0 1 0 0
19 0 0 0.7 0.3
20 0.1 0 0 0.9 |