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[+] Show/hide bicluster #94 rows and columns.
bicluster 94
Mycobacterium tuberculosis H37Rv
15x36
[+] Show/hide bicluster #94 rows (genes).
bicluster 94 genes
Mycobacterium tuberculosis H37Rv
15
[+] Show/hide bicluster #94 rows (short gene names).
bicluster 94 short names
Mycobacterium tuberculosis H37Rv
15
short_name
[+] Show/hide bicluster #94 rows (long gene names).
bicluster 94 long names
Mycobacterium tuberculosis H37Rv
15
long_name
[+] Show/hide bicluster #94 rows (NCBI RefSeq gene IDs).
bicluster 94 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
30
[+] Show/hide bicluster #94 gene upstream sequences.
bicluster 94 upstream sequences
Mycobacterium tuberculosis H37Rv
15
upstream
[+] Show/hide bicluster #94 columns (arrays; conditions).
bicluster 94 arrays
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #94 ratios.
bicluster 94 ratios
Mycobacterium tuberculosis H37Rv
15x36
GENES Amikacin Amp Ascididemin_Natural_product BZA Cephalexin Cerulenin Clofazimine Clotrimazole CPZ Deferoxamine Dipyridyl Econazole EMB GSNO_CFZ GSNO_CPZ GSNO_KCN GSNO_menadione menadione Nam NaN3 NRP_1 PA_1 Procept_6778 PZA Rif Rifp Succinate TRZ UV Verapamil X_109 X_111895 X_121940 X_124196 X_241 X5CL_PZA
Rv0423c -2.44464869576516 0.0812344877340387 0.795191713664454 -0.471186375144497 -0.417675123581032 0.00398103229834525 1.39486024344193 0.474873527134461 0.831080692800101 -0.123005137164741 0.150489524514166 0.472303811889339 -0.0116973829518849 0.724935054861268 1.36690775226971 0.33645444355213 1.21647870734246 0.923681044296778 -0.652434602144339 1.10938963618357 0.386687429461568 0.442635598969604 -0.312870927589502 -0.45960928726632 0.291721795043178 0.376922882517287 -0.309731762506612 0.91224169780506 -0.323145776083311 0.402600223509173 -0.0211581345627781 0.845707193095742 -0.468661653456602 0.0728929864913112 0.152819566751686 -0.057801338289712
Rv1184c -1.59863716978164 0.0439022030045582 0.973562992816004 -0.576317075148595 -0.179823851566971 -0.628012316268984 0.594169388109887 0.26477367231567 1.42794277500745 0 0.758329975283717 0.275369292300038 -0.103944929466169 1.63450070039326 1.86838581770421 0.253503620471711 -0.438120336787103 -0.819428069316246 -0.759208871973699 0.00885311040878648 0.02477695951376 0.144923373574110 -0.47226382102197 -1.00022107428058 -0.645658779721114 -1.19011218563600 -0.0429589500406745 0.2847814124337 -0.762818036622059 0.933631932473774 -0.094621159119908 1.24662391068855 0.187050756314717 0.393931347125419 0.311155761043801 -1.08309299054147
Rv1216c -0.775822095318026 -0.649183507480153 0.571465530021156 -0.127605888118174 -0.559136335581134 -0.577194129438828 0.634201433946313 0.199292290594696 1.12565043881361 -0.0989410889709054 -0.0773791232389264 0.232253244806203 -0.770893570964423 -0.414569840507614 1.70674617339711 -0.544878109808018 0.0595050590984992 0.0572610713414235 -0.492633598620894 -0.0874662738436694 -0.620204397980386 0.215364567523219 0.0513608554760727 -0.690175683848712 0.152067051692340 0.317000413804551 -0.757798616302997 0.990193413544967 -0.221598358314271 0.645342066886311 -0.297535277639363 0.742263701911638 0.0702679045919745 0.298837427866298 -0.196887315749761 -2.04436987156543
Rv1218c -0.310898982543605 -0.280787852459497 0.425980702737759 0.162621048959428 -0.317060451346911 -0.366946241111668 0.531368744709782 0.0378710515014475 0.836823586338926 -0.126722041407361 -0.169996085529846 0.410666744060425 -0.394319460549862 0.908205862982717 1.50398121252298 -0.288166142576867 1.36859937274972 0.469648556141339 -0.60719598656289 0.314101805219207 0.42381943476391 0.111317551028691 -0.143902604351883 -0.361526901017216 -0.358684501257809 0.263044064969957 -0.439359796662678 0.660527371731146 -0.402263078843865 0.646899761796803 -0.448398525706213 0.657221187824337 -0.0234978494727322 0.350942912386709 -0.268961439062406 -1.49218411147505
Rv1224 -1.16686230713301 -0.0301439644612496 0.814819498170355 -0.326204516741966 -0.0955689946274267 0.0464199892669834 1.89862773257108 0.300042121051821 0.85219874673819 0.0118618557438896 0.277056070806099 0.603699736891925 -0.285266516072983 1.21234036947603 1.06132897865594 0.895887334996414 -0.0914271969834411 0.0687175214062571 -0.552103128082396 0.0739404575181323 0.278424262432322 -0.330069702067123 0.654643588705885 -0.175246606701050 -0.104897838983315 0.0726874000965092 -0.409497543686076 0.422095811430676 -0.298588383733638 0.56657592663302 0.078859812209477 0.91961512965267 -0.094918597309956 0.134928401142741 0.0734253158136554 -0.430082184020696
Rv1248c -2.32351068506038 0 0.299826570266123 0.382401657086517 -0.0514948376516483 -0.351187652765932 0.704350807805593 0.651633957020703 1.57003395806879 0.048231581467052 0.259284033217275 0.909430543222781 -0.41262456438318 0.968959114950358 2.14978285343917 0.350106395709361 0.296157721733139 0.311052247733398 -0.128938799147350 0.227504171114169 -0.357357332183408 0.408966050490797 -0.597533171156149 -0.714844619642558 -1.09631849109370 -0.291066144574395 0.227722935409594 0.146968972680781 -0.257312168941515 0.625618505742946 -0.454790412883267 0.693127896872071 -0.63175363209105 0.506837017617372 -0.156406354454344 -0.556523285860964
Rv1275 -1.96267643742741 0.517488643328303 0.978623758705435 0.189032896596609 0.355134796485203 0.280329219107057 0.890834095090143 0.322136927187752 1.65333409383683 0.276128457367716 0.482642883145692 0.76372772811304 -0.278277078420800 1.10017011978938 1.79778657033203 -0.460350124761419 0.633414902971881 0.684715370840276 -0.553653540033021 -0.0711670663750178 0.285603144818301 -0.137420503317095 -0.135128301008200 -0.464396915326540 -0.706179330504141 0.00802500119041114 -0.0526240465218199 -0.272990168103934 -0.0406606765024645 0.459004584532448 -0.115171446926761 1.22846138536405 -0.306085579992722 0.857982845166981 0.250758489304504 -0.154526317768890
Rv1843c -2.19426456024049 0.0954438633718429 0.431740181220824 -1.06215588276001 -0.355434696891169 -0.117639099762445 1.56593165245824 0.550928108802614 1.37421721021588 -0.164088483152897 0 0.793067565546918 0.341535091985866 0.993834440216616 1.54585712232936 0.827956077932526 0.306440288627523 0.436481674754598 -0.82720032885076 0.245107845130734 -0.431744388661904 -0.0588526567278666 -0.127295731429546 -0.868399457573134 -0.535262308697845 0.444737338964773 -0.209261011768008 0.653502326897785 -0.853419496546999 0.139635687104546 0.338847538907726 0.467298999532055 -0.472293957239563 -0.334204837137807 0.892088723733501 -0.547201349652381
Rv2483c -1.21966371523573 0.329355869633405 -0.0643558202112414 0.219062248666704 -0.0711327094933542 -0.924004500894664 2.22753970011422 1.12240285559274 0.857819465083714 -0.256404624957273 -0.0570105925393855 0.79176159381355 -0.754569328967198 1.41671876400281 1.88565684618097 0.0292153437828582 0.387498890594585 -0.136896640826949 -0.599216735287429 0.109883609356514 0.230262155689783 -0.478020601955886 -0.560937322561947 -0.744973149916894 -0.314135624966148 0.0866168417463682 0.375311304740846 0.91283083676948 -0.113743474998912 0.242955529389705 -0.631855517047653 0.44802773656675 -0.416080239441333 -0.160182602404112 0.0606242205802325 -0.3679838857804
Rv2507 -2.34266274273456 -0.0238464949686880 0.215921465435051 -0.0172644358516038 -0.257778538224172 -0.0232155699133413 1.10214697007197 0.585211508465235 1.89578761934985 -0.208078970431891 -0.444775227053622 0.72941463762534 -0.176563060752449 1.08234079839583 2.47394174678671 0.473830382507611 0 0.232510998480661 -0.122066656718268 0.224748197465205 0.357911351156755 0.618585382584386 -0.149522310564436 -0.307506953485504 -0.383839479627841 -0.397219511864046 0.00424446226371614 0.611031768112376 -0.154973138079981 0.315725322486619 -0.0131194203707457 0.461300696063212 -0.881984233705013 0.309385257437055 0.435767878982622 0.076084420725271
Rv3193c -2.13386475459842 0.398179826361032 0.451503790635767 -0.198949019190246 0 0.102207787621838 0.722101045265213 0.358254576197224 2.00322845072226 0.159515019092193 0.256150663104906 0.254500074320228 0.103294486792755 0.717867868058563 2.48344748682896 -0.0407388169618007 0.791766369667002 -0.209909379270513 -0.161244532542042 0.232048810651258 -0.404945641593989 0.277018507917005 -0.295747807231814 -0.465607500669461 0.186060818245059 -0.346606177946977 -0.250342649061255 0.442261370221452 -0.901037976345899 0.075092771585076 0.240063090218552 0.855886941989492 -0.186846237127723 0.475818834022454 0.828025462732938 0.311695965120921
Rv3588c -1.45859494233265 0.369584524949550 0.653008598543648 -0.413566880344421 -0.147893708553177 0.0643394758478807 0.84595195499082 0.264910450202943 1.57688183405537 -0.037721393369551 0.331133429286494 0.660502735840071 -0.159579358215575 1.34548782782727 2.06027508314108 0.241465696234929 1.16195884236647 0.634964147576804 -0.163295083020700 0.0118903732581734 -0.468987847904909 0.195335195595068 -0.192567672035378 -0.597731795014035 -0.673320787234988 -1.12393789452113 0.71920730681132 0.404031031016423 0.184159917030548 0.990291880622879 -0.285853513031897 0.899721425259065 -0.244081073742637 0.494295146559975 0.0145647304252440 -0.828515899228
Rv3719 -2.10395113785111 0.0886433350709867 -0.0758571767406346 -0.793227195593093 -0.28954569752542 -0.269227518570254 0.91315047039273 0.250244659738450 0.780667068316546 -0.173276782444742 -0.299853515524156 0.997109900678395 0.0319219143217033 0.694949874481324 1.48898095006678 -0.137200110209294 0.341914541855634 0.0959881827083134 -0.447254307959783 -0.0425185406820901 0.500268879781227 -0.301137345927343 -0.133941710676135 -1.30254461679041 -0.226144528947030 -0.386071135377190 0.285305458714521 0.524376635151918 -0.191658216603822 0.448554518634537 0.00847242499597127 0.375171471317528 -0.730720300808562 0.0312952498838278 0.423852176634847 -0.638363270205079
Rv3865 -1.12508433470669 -0.108491199092779 0.574017853251692 1.00347703390931 -0.375017542166491 -0.0845105552608822 1.18986604701848 0.0617224288191494 1.42771083329009 -0.583350976087512 0.302219609607754 0.212834845343444 -0.0346164488953917 1.16180069632145 1.90945628198149 -0.0492286815328934 1.23576185108515 0.752390117444911 0.388169576656915 0.708102088944543 0.142849312619692 0.0626698490471821 -0.0948871287246742 0 -0.891137855913026 -0.274254405291343 -0.663542964222865 1.08993230352147 -0.827612991537807 -0.000813351913272956 -0.283201114037151 0.533845776790764 -0.441945882205992 0.475117293701934 0.221300002250372 0.58025978867271
Rv3868 -2.79675718758102 0.859340418118497 0.520134960561137 -0.377802064142698 -0.00449718874117161 -0.37788596645053 1.78476257738151 0.488975026220112 1.65341778183748 -0.0837238296284153 0.567014085662734 0.528132753180724 -0.0426717279614535 1.65819571972511 2.35871070714265 0.0812085259235075 0 0.0233613089053626 -0.999026096904026 0.39544814430973 0.801072167552512 0.32239186444648 -0.238327815910639 -0.92666786765492 -0.616809377094521 -0.41194250730003 -0.283963258902078 0.71739007657114 0.0588336842564198 0.628314720844211 0.082908939289956 0.832960776470973 -0.0296599942142497 0.493962398245292 0.564073325969675 -0.920063205762154
[+] Show/hide bicluster #94 motif PSSM #1. bicluster 94 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0.2 0.8 0 0
2 0.6 0.4 0 0
3 0.4 0 0.6 0
4 1 0 0 0
5 0.2 0.6 0 0.2
6 0 0.8 0.2 0
7 0 0.4 0.6 0
8 0.2 0.8 0 0
9 0 0.4 0.4 0.2
10 0 0.4 0.4 0.2
11 0.4 0 0.2 0.4
12 0.4 0.2 0.4 0
13 0 0.8 0.2 0
14 0 0 1 0
15 0.8 0 0 0.2
16 0 0 0.4 0.6
17 0.2 0.8 0 0
18 0 0 1 0
19 0 0.8 0 0.2
20 0.2 0 0 0.8
21 0 0 1 0
22 0.2 0.8 0 0
23 0 0 0 1
24 0.8 0 0 0.2 [+] Show/hide bicluster #94 motif PSSM #2. bicluster 94 motif PSSM #2 Mycobacterium tuberculosis H37Rv 20x4
POSITION A C G T
1 0 0 0 1
2 0.25 0 0.25 0.5
3 0 1 0 0
4 0.75 0 0.25 0
5 0 0.75 0 0.25
6 0 0.75 0 0.25
7 0 0.25 0.5 0.25
8 1 0 0 0
9 0.5 0.25 0 0.25
10 0 0 0.5 0.5
11 0 0 1 0
12 0 1 0 0
13 0 1 0 0
14 0.5 0 0 0.5
15 0 0 1 0
16 0 1 0 0
17 0.75 0 0 0.25
18 0 0 1 0
19 0 0.25 0.75 0
20 0 1 0 0 |