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[+] Show/hide bicluster #92 rows and columns.
bicluster 92
Mycobacterium tuberculosis H37Rv
23x37
[+] Show/hide bicluster #92 rows (genes).
bicluster 92 genes
Mycobacterium tuberculosis H37Rv
23
[+] Show/hide bicluster #92 rows (short gene names).
bicluster 92 short names
Mycobacterium tuberculosis H37Rv
23
short_name
[+] Show/hide bicluster #92 rows (long gene names).
bicluster 92 long names
Mycobacterium tuberculosis H37Rv
23
long_name
[+] Show/hide bicluster #92 rows (NCBI RefSeq gene IDs).
bicluster 92 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
40
[+] Show/hide bicluster #92 gene upstream sequences.
bicluster 92 upstream sequences
Mycobacterium tuberculosis H37Rv
22
upstream
[+] Show/hide bicluster #92 columns (arrays; conditions).
bicluster 92 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #92 ratios.
bicluster 92 ratios
Mycobacterium tuberculosis H37Rv
23x37
GENES Antimycin ARP4 Ascididemin_Natural_product CCCP Cephalexin Cerulenin Clofazimine CPZ Deferoxamine DNP DTNB DTT Econazole EMB Eta GSNO GSNO_CFZ GSNO_CPZ GSNO_menadione INH Levo menadione methoxatin Mtm Oflox Procept_6778 PZA SM starvation TLM TRC TRZ UV X_109 X_111891 X_111895 X_59
ORFD0310.1 0.116619541044742 -1.39657757417682 -0.489545720998886 -1.23733990656439 0.308978202997237 1.20202630900303 -0.565438073078303 -0.760449917367618 0.225896614847431 -2.38564350825542 0.353987160262763 -1.06521477723800 -0.173772324040619 0.90270431771051 0.40735401545674 -0.122429828017783 -0.877530220217806 -1.13473415738613 -0.0908233130756804 1.39898490712159 0.314972728300266 0.141227055822891 -0.120387620932480 0.637945253319793 0.756581617576414 0.348605153049917 -0.0721063942005182 0.63745121075767 -0.933595267421032 -0.0948332955847897 0.0830096651328413 -0.663832389576137 1.16577225714465 0.69622597057483 0 -0.306923403674905 0.709960378309038
Rv0626 0.0991327557840853 -1.49694353174385 -0.706551610681964 -0.933341784142128 0.65220594820776 0.529788317610491 -1.02233667552568 -0.368032294554062 0.236767197179306 -2.80548319774933 0.0205814618357147 -1.02649731375130 -0.995581275736743 0.78650058967823 0.94983020695405 0.100730141587453 -0.536439567124014 -0.784637206257604 -0.667018148134574 1.79774379446661 0.489288382783054 0.645176853776449 0.180132889502731 -0.0845138505380154 1.17265861142410 0.77955194705053 0.434223817365834 -0.382102624731794 -0.97955474653189 0.00738015204591072 -1.12796402021522 -0.563011360563434 0.243551084239745 0.409912574990848 0.0659500876199686 -0.647098118852113 0.0772207990843802
Rv0643c 0.208487657895805 -0.52907344039702 -0.253563539121804 -2.66179279735676 0.367113263019116 0.884051946599865 -1.18275468346591 -1.09169492452046 0.860736037553314 -2.47087889040767 0.813928232594964 -0.910272803680337 -0.209368180514493 0.42429924934484 0.452674195817345 0.668820820848214 -0.721036571054252 -1.63593885890522 -0.0141848984282765 0.824946005108458 0.482494832945114 0.136107868036524 0.837247576775783 0.520850800640116 0.227962558190812 -0.226560553392776 -0.343464299192625 0.79962383571896 -0.649355781651219 -0.0578652419593168 -1.07485868147374 -1.92587748526181 0.468035866340386 0.356413378242135 0.638304466182934 -0.359421141695953 0.0856068658914994
Rv0714 0.145648252573478 -1.16230750738633 -0.302745978415407 -1.80578083467571 0.205555542052729 0.525017070683436 -0.673668971173193 -1.32403113168765 0.43339626776627 -2.12070142149908 0.296758305496644 -0.841782080323305 -0.220878331995223 0.163100831996532 0.144443561201993 0.308976299521394 -0.748930533339584 -1.61544329366246 -0.241113720362839 0.366969152684197 0.432607071541078 0.130246611972345 0.344438257079132 0.641245665836184 0.345981363500283 0 -0.273865607771972 1.18054279456064 -1.20989855816978 0.0810293821501817 -1.02189914309329 -1.56194703804337 0.631051486797177 0.165603746389679 0.310922255754509 -0.360463166811403 0.197059361329997
Rv0715 0.289895236492191 -1.140474293899 -0.138186996686073 -2.10380864997925 0.311292298578742 0.627979549974575 -0.762939798422751 -1.16380371184105 0.480587126540922 -2.56452878713721 0.356397175994216 -1.09430711927500 -0.20692175964925 0.248804652791687 0.268402799747988 0.421570793052365 -0.725480918233742 -1.84159450333267 -0.153293149843713 0.704536593095596 0.52677777302501 0.214145193395542 0.488971776721797 0.640033604524288 0.579593016988566 -0.00591920503440457 -0.185282287228119 1.32824811851724 -1.1989842988779 0.24575126783209 -1.01093232607284 -1.77725667602606 0.679283300291708 0.175216650336733 0.396941452835998 -0.274141118172874 0.166245080902496
Rv1386 -0.076096390154494 -0.391429907301601 -0.829443123431208 -2.36016759164181 0.309101519893940 0.92638567025985 -0.408915628447183 -1.42214152293986 0.196288800927446 -3.04943896787918 0.393220446874496 -1.59919168158431 -0.771410854425709 0.510715874627643 0.190321977189208 0.262283471805909 0.534499559699671 -1.79032258592985 -0.425228182032298 0.662393168274094 0.593791928857907 -0.92925932022783 0.223138146384032 0.114243500734439 0.340682647856563 0.310336632366852 0.75752392242173 1.66983251365090 -2.59431798373211 -0.61111650685177 -1.31941448629719 -1.91004144410451 0.694275021093336 0.451291744658951 0.195428801972383 -0.740367938912833 1.25942528279082
Rv1387 0.512827893100084 -0.919888965508155 -0.262057562526509 -2.24104325295561 0.483842750004348 0.714343629448479 -0.117036073895401 -0.480592227989449 0.467166446353398 -2.67861031400297 0.268943713003552 -1.13197685393365 -0.107185159619850 1.07532211826935 0.279247223939395 0.478804288401874 0.949629260691725 -0.733040853345725 -0.036438740987512 0.631968031206629 0.460966347551484 -0.557285378331757 0.388625461348173 0.141422845802297 0.398922392224878 0.249064143433712 0.506100901067362 1.52428199684822 -2.41332328499802 -0.287110240117287 -1.70115047124024 -1.79311672871027 0.687065217478976 0.546905008649593 0.786519965214564 -0.194942293172539 1.41389590283507
Rv1408 0.252252436867143 -1.28371642618923 -0.528827097595963 -2.83700169841147 0.0745140936434422 0.718765471698866 -0.852282852826477 -0.944666614144332 0.324152183701039 -2.30380095022354 0.621541004999298 -0.855606934768849 -1.04342853303514 0.247536397726692 0.761402623985634 0.155115271453637 -0.889427904886449 -1.32714776431848 -0.727506714216223 0.932761443933804 -0.287011075017886 -0.648461059726332 0.262578254273276 -0.150915815868095 -0.353228735235593 0.395187757797996 -0.143594671648902 -0.0597372572833533 -0.9358583282625 0.178183599207528 -0.976286025227869 -2.23979591528261 0.173232488808604 0.199424438153898 0.168576644260619 -1.21210915421549 0.179191518695322
Rv1591 0.59102171659938 -1.25291074041277 -0.149491365521603 -2.96953485367687 0.386175318113296 -0.051776163336009 -0.383986831573846 -0.592863970019731 0.177463103617604 -3.23662837378045 0.574220100648113 -0.204216069470276 -0.0681710219551693 0.429311840789916 0.116825698599632 0.358976770639184 -0.0512817610589016 -0.165582154586144 0.146037818257528 0.610614394330323 1.12527282296401 -0.248562702064907 0.103441452246036 0.694992513698227 0.95089411874394 0.871599886631548 0.352903399291138 0.394806097354561 -1.14613026456863 -0.256093662841795 -0.883645444879663 -2.32886309296925 1.08136539982886 1.08294521078145 0.174428533453666 -0.201364656342604 0.980259345538301
Rv1597 -0.392982886930806 -0.437937067562668 0 -1.23582124149477 0.0308770030794107 0.355873849515421 -0.0289313413890075 -0.262376925555825 -0.0416842553861136 -1.91046691388354 0.0265194339803379 0.182324560602919 -0.89566287154809 0.256475691336422 0.448662945345071 0.226853050350234 -1.00903454206008 0.0158610019365361 -0.697236877564787 1.38969780128959 0.272529219800062 -0.574381218680387 -0.370351340515314 -0.869589847093837 0.253471297909381 0.642158067414997 -0.405728110314638 0.535162499945391 -1.17921869883938 0.0558278277934919 -1.20326928240649 0.128436544458659 0.0703597450474917 0.467165356211593 -0.361205610970426 -0.788084755684819 0.128244005726170
Rv1870c -0.270834365708857 0.157495894892418 0.0515179004337573 -2.32083479593709 0.278573269135746 0.0470007606878547 0.797836295063487 -0.717055757258343 0.0242931234505901 -2.00285791440594 0.205537015740348 -0.267012015114404 0.475671134868417 0.397544457886693 0.442167964478071 0.697385325970554 0.243292340076522 -0.797585131211883 -0.173788117961102 0.833341624273664 0.529652289566275 0.100451599776401 0.649685593871685 -0.0820796034745261 -0.173300772706416 -0.181675363660879 -0.123431954525888 1.36939503782535 0.280568302506492 -0.305066983112224 -1.75799918168648 -0.751224363474943 0.0993316375944606 0.123864449430450 0.182359804931718 -0.150066306668779 -0.100548894911594
Rv1887 -0.20685432634498 -0.104198403836874 0.27902057056559 -2.69974996535148 -0.103531220988605 0.118085183400242 0.354738809407493 -0.608288579525549 0 -3.02965049810099 -0.0581989636370211 0.434688758410772 0.545186014745303 0.174027442464717 0.730475512472365 0.0782850537202002 -0.448815090788165 -1.26185171292203 -1.12164464247862 1.04469706095469 0.0770851036866012 -1.03110974349931 0.148042135442701 -0.158258336208689 0.360922164378959 0.357064696870445 -0.689178281916314 0.632808245184421 -0.73709822252958 0.49070241362265 -2.44797459587268 -1.22995140089584 -0.234463570989466 -0.237508056104365 0.0961847138623585 0.132177949700655 0.163813811012205
Rv2144c -0.117660685869427 -0.335060002156775 -0.806304373630769 -2.05222754671163 -0.105709296674244 1.29345824021994 -0.460040791871206 -0.331816545381786 0.450507684704436 -2.60953886435792 0.777326400473685 -1.00532210154147 0.120354549732709 0.875385738372534 1.18915837962165 0.413010307338238 -0.143722441380254 -0.463452437881969 -0.584941264342847 1.55190720210368 -0.138122609173307 -0.229056496968884 0.157090706468067 0.561319386655005 -0.081743396371927 -0.081739882386135 0.100058895849228 0.427083202135493 -0.738951722819396 0.751511015593608 -1.29204391095602 -1.48954900207236 0.596203164190751 0.513645327649681 0.239077835320902 -0.285938915302598 0.508073624356258
Rv2585c -0.251458174010327 -0.82271664130635 -0.135027186544062 -1.99762584732473 0.0904297624438415 0.0652813546358763 -0.00472753839055748 -0.358279232012314 0.301721651887174 -2.21089068829413 0.388907572847367 -0.86010596253085 -0.103095298374365 0.800502002563257 0.420438308134175 0.316299816960377 -0.290749316340814 -0.677432320347426 -0.998468039005638 0.349076775365206 -0.403917200645677 -0.549194349788462 0.0565452284099085 0.319263109163147 -0.0645264706747717 -1.02526332083312 -0.644061262964102 0.414894654343989 -0.677797387743435 0.133644557129671 -1.19350776978301 -0.492157361426304 0.745276308280314 0.918812178521215 0.184768832467283 0.0157491778859421 0.110306877385458
Rv2785c 0.183877303741859 0 -0.110523157598017 -2.1717469147059 -0.0529215077316601 0.742985345999782 -0.481348943066826 -0.837814089169006 0.066038764886711 -2.21086447021715 -0.217400950459156 -0.90504416743005 -0.657985055435929 0.172206648259024 1.3677624367026 0.223991305936609 -0.396496903836299 -1.02056116118997 -1.19745495410631 2.00662688187935 -0.121276226863802 -0.413195155011136 -0.0858760414547846 0.163869825668283 0.261165308502998 0.595216288802506 0.0435401298985186 1.36111448184691 -0.670063019850426 0.584429094803291 -0.24114568937306 -1.91464594069100 0.0081222907614264 0.468120494340498 0.00954121627526694 0.077845307280559 0.081058788363654
Rv2904c 0.160107747415552 -0.30305187014579 0.0425849436270602 -2.3978618123221 -0.107803146219607 0.713919048352113 -0.644336212329043 -0.53759457105284 0.188061993234979 -3.25535701295843 0.00268831277845357 -0.145093090926494 -0.0861507516274051 0.463426025887304 0.59660853983904 0 -0.633688660785115 -0.747447850383226 0.172075924646392 1.04015400905448 0.338781062900738 0.614940542372274 0.146344496218228 0.55010115758381 0.300078659234327 -0.0170761155052523 -0.0132690900495377 0.977572299958541 -0.429958172718322 0.172590743466564 -1.41128972045424 -1.08450858676416 0.784891467012436 0.268418887223854 0.103944075067605 -0.101006697943903 0.184448780653715
Rv2907c 0.210058216905069 -1.44038585811050 -0.118123979850900 -1.59501116974410 0.153217424750119 0.704640340353467 -0.681858581612383 -0.638030434207599 0.422951371692771 -1.29359293016991 0.277266764257929 -1.0003372202112 -0.328772257827352 -0.118555334559717 0.756314184048309 -0.0410911280712122 0 -0.751513812574037 -0.329578583496701 1.08453545472511 0.100105021546592 -0.519987820272133 0.255972756478278 0.428312929425648 0.424757400295492 0.0178096360442466 -0.256238335939037 1.25657004662386 -0.087021102266717 0.179008501857851 -0.985177776167716 -0.792244348000704 0.550248334362393 0.176324876193615 0.218963184483432 -0.107216863146930 0.376384690566756
Rv2909c 0.33655140952028 -0.66969907973023 0.115628978777996 -1.84062581754807 0.331961605694580 0.810441900912231 -1.10921665841185 -0.487365302464685 0.317349814244511 -2.32071980395478 0.28490683535272 -0.624661954820196 -0.254104204998121 0.378635654154129 0.508569392774472 0.256830733604772 -0.569943454737125 -0.573966904659017 -0.93377265714797 0.90538397092206 0.189390520628776 -0.166407350350533 0.214136726682966 0.478916798921657 0.421533427362145 0.298797127574 -0.0719373908929935 1.02351881289393 -0.394636531751911 0.478365455727415 -0.93922286808203 -1.04621189060194 1.04288905284047 0.215152808461232 0.250803058825277 -0.120002968469079 0
Rv2951c 0.305234783577682 -1.30448630375580 0.136477351029859 -2.54277853114877 0.641846244802903 0.565610545192921 -0.756862601782569 -0.652035562187576 0.532890253501294 -2.77272988745455 0.834655215371322 -1.03570401186980 0.0159258934071994 0.736842017012506 0.928491938736216 0.166594689422014 -0.719410814521856 -0.911209117296014 -0.343862316605975 1.54612403908488 0.083978010889559 -0.800983784972437 0.117122889975243 -0.0534176742653646 0.231154865926822 0.277070670887414 -0.846639936844227 0.175744516729394 -0.321626757511814 0.213511916912436 -1.84038629657951 -1.54975140068209 0.294360341253628 0.514220523421289 0.494493113540139 -0.253135521957562 0.394533558071712
Rv3025c 0.534236856840589 0.333301300030037 -0.0558202523271903 -2.78856492681729 -0.0419775115378094 -0.159895745144711 0.0616203893033307 -0.109852709294075 0.240524426659457 -2.95460211527045 -0.322052920259541 0.273214518335813 0.0306570021179144 1.28288531575473 0.313021891095367 -0.187359432621000 -0.0492613795960202 -0.696707755767424 0 0.884176412186674 -0.248597571097455 0.120431597877917 -0.000642251373572846 0.909028505881915 1.3129311867199 -0.021375688457442 -0.140695211015799 0.578939775829524 -0.254846429672001 0.888663347992547 -1.18931547919613 -1.92906538152137 1.14684115040795 0.847089699481343 0.268537678236451 0.618808649504631 0.828349624372613
Rv3726 0.454417184064411 -0.866188012591754 -0.277737284683145 -1.69350132145184 0.701247841203006 0.102663426569311 -1.40204303357585 -0.750222482442891 -0.059281492419802 -2.44542836196382 -0.132134969329202 -0.7622322466314 -0.0721988653602668 0.888884071598041 0.880511481584818 0.219783643609393 -0.788156693196986 -1.00195388157345 -0.753173998798185 0.755210967060768 0.122501731603011 -0.287127137163999 -0.11374010176567 0.805219320160122 0.692368748465295 0.329396557901788 0.323891702622761 0.355131471903191 -0.216704516174457 0.382416371371497 -0.889502972232048 -1.08255671926629 0.84619121277253 1.02061151722275 0.0564162034392706 -0.779019346584512 0.694492691416261
Rv3908 0.355690827811118 -0.496851076734575 0.407760686988631 -2.91798894486916 0.115447556373659 0.677295252463545 -0.239200425808415 -0.236881450932667 0.811253401436982 -3.70016158802501 1.03849816101969 -1.23280282558318 -0.496036600427867 -0.116227111417240 0.916169606964986 0.241046568834266 -0.603496139112727 -0.619557384881396 0 0.259257494342744 0.299177074813077 -0.732301397964941 1.27645634215517 0.0161169840734639 0.852757441273232 -0.131137221426998 -0.0803128173520656 0.118743245449199 -1.06865308230039 0.0792809932477394 -1.29634627332723 -1.41258534373745 0.290743350268575 0.818731730631191 0.853823157934633 0.408812289164321 0.605953512588183
Rv3924c 0.270792017782308 -0.628791662576638 0.167796007059811 -2.6862338997256 0.0532129792252828 0.565415769074555 -0.308156826779985 -0.559320889599073 0.304723359945914 -2.49065716346974 0.101368350213864 -1.19697537562971 -0.246953786187778 0.442724906228826 0.409188380648736 0.310513913839423 -0.014105900269388 -0.675331824959443 0.0501547622900825 1.00246964581197 0.0654254597430476 0.261179945515327 0.099247762391679 0.777066645414893 0.493225100694272 -0.413338891457452 -0.452362068552355 0.561191066281566 -0.614413313555204 0.0414471809741647 -1.53092654992487 -1.09669007503972 0.547347333718287 0.44537737986502 0.159276960218225 -0.000229958728863576 0.469855363408292
[+] Show/hide bicluster #92 motif PSSM #1. bicluster 92 motif PSSM #1 Mycobacterium tuberculosis H37Rv 10x4
POSITION A C G T
1 0.105263 0.894737 0 0
2 0.631579 0 0.315789 0.052632
3 0.263158 0.315789 0 0.421053
4 0 1 0 0
5 0 0 0.947368 0.052632
6 0.210526 0 0.526316 0.263158
7 0 0.894737 0.105263 0
8 0.578947 0 0 0.421053
9 0 0.157895 0 0.842105
10 0 0.315789 0.684211 0 [+] Show/hide bicluster #92 motif PSSM #2. bicluster 92 motif PSSM #2 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0 0 1 0
2 0.8 0.2 0 0
3 0 0 0 1
4 0 0 0 1
5 0 0 1 0
6 1 0 0 0
7 0 0 0.6 0.4
8 0 0.4 0.4 0.2
9 0 0 0 1
10 0.2 0 0.2 0.6
11 0 1 0 0 |