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[+] Show/hide bicluster #90 rows and columns.
bicluster 90
Mycobacterium tuberculosis H37Rv
18x37
[+] Show/hide bicluster #90 rows (genes).
bicluster 90 genes
Mycobacterium tuberculosis H37Rv
18
[+] Show/hide bicluster #90 rows (short gene names).
bicluster 90 short names
Mycobacterium tuberculosis H37Rv
18
short_name
[+] Show/hide bicluster #90 rows (long gene names).
bicluster 90 long names
Mycobacterium tuberculosis H37Rv
18
long_name
[+] Show/hide bicluster #90 rows (NCBI RefSeq gene IDs).
bicluster 90 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #90 gene upstream sequences.
bicluster 90 upstream sequences
Mycobacterium tuberculosis H37Rv
18
upstream
[+] Show/hide bicluster #90 columns (arrays; conditions).
bicluster 90 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #90 ratios.
bicluster 90 ratios
Mycobacterium tuberculosis H37Rv
18x37
GENES Antimycin ARP4 Ascididemin_Natural_product CPZ Dipyridyl DTNB DTT EMB Eta GSNO_CFZ GSNO_CPZ GSNO_menadione INH menadione methoxatin Min_med__succinate_ NaN3 Nigericin NRP_1 Oflox PA_1 Palmitate Procept_6778 Rif Rifp SM Succinate TRZ Valinomycin Verapamil X_109 X_111895 X_121940 X_241 X_59 X5CL_PZA ZnSO4
Rv1157c -0.840298183958308 -2.02430123477488 -1.98949249032258 -0.197992845415755 -0.746212065492871 0.164274493256305 -0.266561661214791 0.60444748572682 1.09217276919099 0.0153937390457440 -1.31093158218434 -1.07431470989617 0.874346201126629 -1.71724764236699 0.241688499663024 -2.96758738242627 0.204295585502571 -1.04554008484049 -2.64779048217116 -0.748556487407395 -0.208863625096016 1.00941604707657 -0.00915222627643435 -0.351375485710076 0.231797957208101 -0.679003219726676 1.48725109952483 -0.970786967845083 -1.52132345781117 0.55080746918161 0.396813935591624 -1.52129433599072 -1.37049690201906 0.237993592965712 1.12115505359282 -0.277738091001214 0.510433807519785
Rv1158c -0.712432214248078 -2.28647063342649 -1.92048435950573 -0.197625745362197 -0.833667228258087 0.342270493524578 -0.0735635755095898 0.927608525464676 1.15543235863125 0.0219255179172465 -1.23984797294777 -0.798386733377108 0.850383893330015 -1.22426961900233 0.185025969446376 -2.92959882622811 0.399005939229666 -0.577648717077757 -2.15151831644101 -1.39660821451224 -0.141360166305413 1.28685371601537 -0.143833430134040 -0.881353638623523 -0.166187266054583 -0.667653787161293 1.43523860801750 -0.752281928592032 -1.00532152241103 0.480010313838186 0.450488518704016 -1.8546325451921 -1.08251367041345 0.269614358626631 1.16278640803879 -0.261336124422115 0.653967515840803
Rv1566c -0.8330837029229 -1.58939072725125 -2.18987579720019 -0.371716108740128 -0.893179956738011 -0.0281501022996185 -0.139860122374584 0.761540136154947 1.30977417318274 -0.84944068781672 -0.860081157482814 -0.726738336623527 1.08273086481236 -0.704298061923339 0.253260473227407 -3.62784030660064 0.110140352324638 -0.74066508748158 -2.50687916899671 -0.67956190678606 -0.747500338766541 0.214450033029483 0.0273560924292761 0.232442630811042 -0.513068812992631 -0.297559574611759 0.388142459422086 -0.361579648338538 -0.432997945299098 0.0254299222973616 0.214008240905341 -1.71050391583077 0.0195912255236165 0.243695705441931 0.451316094549342 0.270239991510526 0.432684381475274
Rv1698 -0.552333260778776 -1.79999558233213 -2.02954681002957 -0.636129512853744 -0.814095871986145 0.427578591491439 -0.922152150004874 -0.0211425533649865 0.922498761054533 -0.846620458780183 -1.34496695177347 -1.49143155290372 0.784465669519307 -1.275069635188 0.450814165963483 -2.58870663270523 -0.0344400708444916 -0.273499008753118 -1.25578027464398 -1.98463867276285 -0.337981189086749 0.743339606604018 0.629345351616411 -0.603890869745009 0.246760439525175 0.0289494971673869 0.792824457218282 -0.509700542603396 -1.53511740688385 0.4132507635874 0.587431731890531 -1.83518512264535 -0.833487058356514 0.156626080629813 0.461996601476164 -0.164981691716701 1.15748332059044
Rv2147c -0.787133243494334 -2.35776051451125 -1.14372092852209 -0.083557481383446 -0.795700118163509 0.950658483268197 -0.919564991756232 0.61439778052348 1.28388700172055 -0.589840239325155 -0.872949936280425 -0.795052278381133 1.34890152099302 -0.910926564680067 0.387938892507258 -2.41663172657886 0.0304453652435076 -0.406927602436880 -0.414438318855842 -1.04573450876225 -0.374133204043702 1.23321046650991 0.409282825692428 -0.517660975150063 -0.0510798842039611 -0.479091926975927 1.06569114926158 -0.0917457797448583 -1.33222592866809 0.826503961099804 0.305705469531606 -1.22332816591626 -0.901623994868446 -0.0280740865053488 0.532525960948679 0.0944411957469128 0.820464469985421
Rv2150c -0.94053582767607 -1.19002452867229 -0.230411442393866 -0.490347987965272 -0.39813793243555 0.663497346170776 -0.847251469565478 0.656258447493475 0.8367605482061 -0.462369232516779 -0.334278339620432 -1.60241183325794 1.21498346861543 -1.35421872679377 -0.332580142035264 -2.50036677428715 0.185288041355862 -0.200700679558665 -0.384339924588113 -0.191678298781409 -1.00856488979858 0.686817368285805 0.325713840499892 -0.375310003976343 -1.1593835201235 0 0.00103938262636968 0.291093032222076 -1.13870061869236 0.509822975030062 0.347378296876037 -0.722358718027992 -0.733912463446917 0.331106460557254 0.465895313936665 1.33662595092073 -0.0150205514653797
Rv2151c -0.382229702810534 -0.649884210081611 -0.462121397208667 0.03491907199823 -0.528890599349034 0.755884275869846 -0.525898821203536 -0.0401011162902674 0.47580648470158 -0.733023857424781 -1.18136867813231 0.565224840415943 0.703258383172956 1.08366820919649 0.549249022119518 -1.25474117456572 0.182440462283992 -0.0412987329711532 -1.95988224759085 -0.914656437812806 -0.76433639284677 0.112763184168464 0.42731701377392 -1.15264596970853 -0.592710275557683 0.0101441915266701 0.748021132294889 -0.78796212032461 -1.28847718964765 0.564223974467539 0.485434957909268 -0.651372113336404 -0.155755161489391 0.154430063220668 0.660115509252805 0.151338606199364 1.83871229615791
Rv2152c -0.98753744706199 -1.15942237781393 -0.387482963778419 0.283189600417187 0.32332258136991 0.137221219846824 -0.598881334726154 0.56855431419594 0.336402756004446 0.0474362722390658 -0.0269372027645119 -1.28380666717577 0.671912447692155 -1.21404452936946 -0.286013609049363 -1.24183494436084 0.0991253491671945 -0.71785189529696 -2.44736075516013 -0.330525650376091 -0.70012990203801 0.0302590783576526 0.83769702346988 -0.128725089441671 -0.45882020289386 -0.178901591720363 0.306638476628445 -0.757592538771492 -1.56539546146072 0.143759747009598 0.463775444629743 -0.485400848291152 -1.14376213480314 0.562449811790748 0.528088141684326 -0.670651230725814 0.642666212626185
Rv2154c -0.827276221421226 -1.15204932028052 -1.45707318642908 -0.106743525350372 -0.304855381967616 0.229556699191483 -0.220451359574129 0.272077099466180 0.393307144825694 -0.522331659981854 -0.657080078532327 -1.11600644891227 0.092551960680148 -1.01366979222848 0.12719937752115 -0.17580769985468 0.287115249899548 -0.331133501079218 -1.78934942121981 -0.91294415013756 -0.393402872192496 0.78864049709268 0.316066681100385 -0.553512899861112 -0.79963337193313 -0.511756245366257 0.991179163941228 -0.86440976413401 -0.750118256154281 0.309653100283422 0.181595808846093 -1.32452978053721 -1.63370612837502 0.00420660739058812 0.63326257457993 0.117282358607977 0.558329056159002
Rv2155c -0.976362799301203 -1.60509144160427 -1.50367328231855 -0.716316545189296 -0.0986233028112074 0.245231706465021 -0.376482477147948 0.25430758072354 1.51423242399092 -0.854891431279582 -1.31463852229908 -1.80977185153632 1.62039129266392 -1.84379773593873 -0.249636373917482 -1.10856284390679 0.0310425765900330 -1.00041264798838 -2.20687513872197 -1.84713482712815 -0.529235357739397 0.847660766191702 0.493048276303711 0.111551822551953 -0.0881294701821886 -1.3859931315669 0.661187975442786 -0.602678835430136 -1.82619172491920 0.0443366785545021 0.685976799245887 -1.64721364512527 -0.473151930854116 0.109821954341869 0.34040535414911 -0.0804701354455177 0.371968781211251
Rv2350c -0.263564372224709 -1.55525877228863 -0.45629552119596 -0.269275196233434 -0.590365678126668 0.680907008049593 -1.46764186568695 0.308862625535560 0.78561459079799 0.439894987955798 0.553166867218139 -1.92078671958869 0.933012978718309 -0.961031875505612 0.340086570532398 -3.01816369233530 0.874547713723068 0.0696373593646118 -1.56804937126033 -0.363768848339263 -0.00434539400969004 1.18430942587715 0.31440559989976 -0.367742647159437 0.30806472236739 -0.241637413109833 0.689033527311188 -0.827711949674845 -2.73824284401201 0.801013871432455 0.45051011598091 -0.790338738479783 -0.560892335407154 -0.0601042601294742 0.547984636126434 0.456410839616165 2.00088933204814
Rv2927c -0.998759565857876 -2.23608166190448 -1.67442478509859 -0.151507664166686 -1.00549633569875 0.323008676177096 -0.633935378198872 0 1.15506624082102 -1.10546866052513 -0.777661302574446 -0.612721668986523 0.965079253649318 -0.732477808558174 -0.197468568073158 -2.91670039596591 0.442039368128396 0.0272124496429707 -0.941894896444806 -0.632451778530005 -0.0509417520794026 0.836932884290682 -0.0260063362982827 -0.84725127032299 -1.12562581729314 -0.571262957235873 0.683787367644265 0.309119786255996 -0.712611027807402 -0.170457168074232 -0.0983291868611005 -1.84013127427906 -1.53150945301379 -0.217844422782605 0.0987123262065872 1.08635863792196 0.603506125358678
Rv3005c -0.5410387367724 -1.89389542185325 -0.560025151320845 -0.457525295978495 -0.273993322462824 0.742536743332836 -1.03593769722037 0.554903306359919 1.42210463959921 -0.293839148250602 -1.36199966629695 -1.16332233468040 2.01875758356081 -1.28346452680017 0.0736458145428846 -1.40208876133195 0 -0.229294141415382 -0.888393103581336 -1.09670848165635 -0.201592563512152 1.20067457000811 0.165886290594043 -0.468095986361699 0.0951694873488263 -0.0943896987952081 0.987296370883024 -1.28852889753945 -2.61435812815664 0.591378865479349 0.261666963766056 -0.571256326398052 -0.55895317725827 -0.122212307918628 0.726099667461454 0.70596250503906 0.0678095381833616
Rv3209 -1.07774198880331 -1.56186652922281 -1.00722467639865 -0.0113407259484581 -0.569026162326637 0.61553385063486 -0.171576529169488 0.0896484706562036 1.03272399347320 -0.434167346200511 0.462292026654392 -0.468616632531099 0.978713384768253 -1.06328576397132 0.140773873323225 -2.05805724215129 0.935680518103598 0.106575796351621 -1.30689641618384 -0.176387056507322 -0.421292011648088 0.366167039997165 0.662514260683174 -0.479556031936551 0.166447328038799 -0.678098186543924 0.548129023041795 -0.351527774609464 -1.38332535942726 0.517088377962731 0.399757908979028 -1.04725738438842 -0.8776828954904 0.460349364611128 1.03425320752873 0.084777580995115 1.45879543348282
Rv3246c -0.664863022359276 -1.90669102507091 -0.755307525238716 -0.194276401516162 -0.179297148428544 0.501787709351451 -1.26112078762554 0 0.88443785018179 -0.480113250469411 -0.586027249024583 -0.631640765241648 1.56020339250906 -0.920702795725021 -0.157304490537785 -3.38597165839734 0.439518108377056 -0.304970690747297 -0.512383661407599 0.475436094282394 0.0464632357187548 0.64515305899687 0.0694141787033668 -0.0206426556991279 -0.587104492763545 -0.0171139926789397 0.52207886483229 -0.147139327811279 -1.66055981623021 -0.347625878200187 -0.0105660837034626 -0.742615235758984 -0.807092911965182 0.225523477926284 0.103956288385049 1.31008877082458 -0.345954270207035
Rv3330 -0.524328893886056 -2.19666378716181 -1.13334481129774 -0.763694778387182 0.154330094472632 1.03148868921206 -0.680950946724766 1.31575725790891 1.83916829728558 -0.465322569154827 -1.60440063192348 -1.28856465042362 1.11770483171134 -0.48579844091638 0.691450207961023 -2.19685745683302 -0.156696234608977 0.20324499719306 -1.12182884878389 -0.0344158412588687 -0.272877226934331 0.899399095405956 0.247629439769461 -0.872950493242549 -0.549959465382599 0.605671771409346 1.13071761604810 -1.83162779802523 -1.35692953772860 0.833614348525419 0.963929404935725 -1.08131934170472 -1.57707072273307 0.304519191558447 1.11997445978514 0.272135591338700 0.76504817573938
Rv3587c -0.558644535552027 -2.50013473734076 -0.348785605263843 -0.716625515825144 0.306849850069704 1.06376762831438 -0.97606064710347 -0.0260560020957016 1.03285327134103 -0.10613862908724 -1.61294653738558 -0.981720270740054 0.763153454275964 -1.653585610008 0.49148344929087 -3.57954023586211 0.383863973914006 -0.506660949510916 -2.04158275125910 -0.83517961764333 0.273703945539891 0.823633788204909 0.481450293764662 -1.12406250547325 -0.227968924983863 0.152233383327643 1.04999463737122 -0.636435130183809 -1.96525783947485 0.394048341448439 0.0425589288974374 -0.32865054185316 -1.30480297571339 -0.496071631360711 0.704899429986168 0.684682886688287 0.167038021042330
Rv3717 -0.926083732321639 -1.36248544822959 -0.772124009913915 -0.138085483111157 -0.214698259589792 0.488024086944863 -0.301283757533463 1.34094313877250 1.90825051436442 -0.110127407166666 -0.902571028533171 -1.04718954695840 1.39759576843778 -1.48199200642799 0.37359788957623 -1.53164244171142 0.876466239088787 0.00103143765328241 -2.05161027834397 -1.28178100429764 -0.703931295750155 0.400052503516787 0.271644872281632 0.117632781771124 -0.574296870918243 -1.03251391727456 0.7164639657975 -0.146830366684996 -1.45054039463701 1.06556626709664 0.786791184076201 -1.05506697756474 -0.809038515202972 0.614014390847539 1.10368727077268 0.417577463387118 1.27973404251542
[+] Show/hide bicluster #90 motif PSSM #1. bicluster 90 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0 1 0
2 0 0.142857 0.285714 0.571429
3 0.285714 0.714286 0 0
4 0.857143 0 0.142857 0
5 0.142857 0.857143 0 0
6 0.571429 0 0 0.428571
7 0 0.285714 0.142857 0.571429
8 0.142857 0 0.142857 0.714286
9 0.285714 0.571429 0 0.142857
10 0 0 0.714286 0.285714
11 0.142857 0.428571 0 0.428571
12 0.285714 0.714286 0 0
13 0.714286 0.142857 0 0.142857
14 0 0.857143 0.142857 0
15 0.571429 0.142857 0.142857 0.142857
16 0 0.714286 0 0.285714
17 0.285714 0.571429 0.142857 0
18 1 0 0 0
19 0.285714 0 0.571429 0.142857
20 0 0.285714 0.142857 0.571429
21 0 0.857143 0 0.142857
22 0.857143 0 0.142857 0
23 0 0.714286 0 0.285714
24 0.857143 0 0 0.142857 [+] Show/hide bicluster #90 motif PSSM #2. bicluster 90 motif PSSM #2 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 0.4 0 0.6 0
2 0.2 0 0 0.8
3 0.4 0.6 0 0
4 0.8 0.2 0 0
5 0 1 0 0
6 0 1 0 0
7 0.6 0 0 0.4
8 0.6 0.4 0 0
9 0.2 0.6 0 0.2
10 0 0 0 1
11 0 0.8 0 0.2
12 0 0 0.8 0.2
13 0.2 0 0.8 0
14 0 0.6 0.4 0
15 1 0 0 0
16 0 1 0 0
17 0.4 0.2 0 0.4
18 0.6 0.2 0.2 0
19 0.8 0 0 0.2 |