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[+] Show/hide bicluster #89 rows and columns.
bicluster 89
Mycobacterium tuberculosis H37Rv
14x36
[+] Show/hide bicluster #89 rows (genes).
bicluster 89 genes
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #89 rows (short gene names).
bicluster 89 short names
Mycobacterium tuberculosis H37Rv
14
short_name
[+] Show/hide bicluster #89 rows (long gene names).
bicluster 89 long names
Mycobacterium tuberculosis H37Rv
14
long_name
[+] Show/hide bicluster #89 rows (NCBI RefSeq gene IDs).
bicluster 89 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
26
[+] Show/hide bicluster #89 gene upstream sequences.
bicluster 89 upstream sequences
Mycobacterium tuberculosis H37Rv
14
upstream
[+] Show/hide bicluster #89 columns (arrays; conditions).
bicluster 89 arrays
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #89 ratios.
bicluster 89 ratios
Mycobacterium tuberculosis H37Rv
14x36
GENES Amp ARP4 CCCP Cerulenin CPZ DCCD DIPED DNP DTNB EMB Eta GSNO GSNO_CPZ GSNO_KCN GSNO_menadione KCN mercaptoethanol methoxatin NaN3 Nigericin Novobiocin Oflox pH5_6 Rox SM starvation TLM TRC TRZ UV X_111891 X_111895 X_124196 X_241 X5CL_PZA ZnSO4
Rv0009 0.610166449631425 -2.25283546163468 -1.20178503127664 0.771893831294558 -1.32874369859327 -3.32937532414850 0.559669038463908 -1.86464734680004 0.483135025126081 0.514596064565612 0.961515089680861 0.740233355767129 -1.95482724665691 -0.427985079509492 0.0369090156312522 -2.37825440541635 0.77484404900607 0.68180997284563 0.0652336389884752 0.71466254420293 -1.54505663654672 0.666323179028785 0.135666968734546 -0.273502732397378 0.450776140665014 -0.737387317404398 0.639863214334954 -1.31276998522047 -2.40077182045867 0.830765295520729 0.630464495726853 -1.70533135293832 0.613408469344933 -0.566812211123264 0.130226619934957 0.5395147969217
Rv0567 0.616481693933029 -2.52488516272745 -2.08852485807709 0.528010766721716 -1.52807190937205 -2.91062258089126 1.00508902922622 -2.88126703405698 0.322059550243463 0.134208387429220 0 0.76836235271862 -1.52508385803371 -1.10414719753374 -0.915676757007011 -1.65756619497549 -0.27918679045854 0.625989967470512 -0.483673345815274 -0.0161046956815012 -1.51494862103590 -0.214402292360861 0.837235739963688 0.627156021246383 0.182717331485507 -1.81473793461910 0.449781669552104 -1.73655377946716 -1.87893359563586 1.23162710421612 0.867026002254874 -0.331168665305522 0.226107241357190 -0.371772905515987 0.423244382537749 0.850558791726137
Rv0706 0.894264607203923 -1.86745283587448 -1.88556360202854 0.439632468936902 -0.973035689568662 -3.01325558493148 0.623975790863315 -2.82619663930529 0.317797047780939 0.0860121590748567 0.187018638020622 0.592070260443453 -1.68660587221501 -1.21941968781382 -0.730331313964912 -2.60928519389582 0.996869597723149 0.192680005778930 -0.561744016026381 0.511880197649697 -1.1717163167184 0.0829599085579533 0.151317333007577 1.00691726149690 1.09546929936673 -1.00824659365155 -0.0542975591214364 -1.79942118029472 -1.13385235832200 0.293285094825711 0.520919273504296 -0.0805441128547862 0.245558436721159 -0.672064265500776 0.281029365350326 0.592143373102912
Rv0723 1.03694145412968 -1.02922135741860 -2.32359319223482 0.744256346715202 -1.09344445302969 -2.50048448397197 0.705198988513529 -2.47687565662976 0.888331279298257 0.257640830794735 0.61678700622798 0.909140640133672 -1.77437062760884 -1.43903388063744 -0.474697137658354 -1.53444721884407 0.450684788648644 0.645909168403841 -0.927713039940004 0.250769171611821 -0.495092305249787 0.821337903727516 0.166452771204885 -0.354158637325301 0.964776001249237 -2.24598154779976 0.597522360072883 -0.716721483774781 -2.31264625475166 0.565068362542574 0.775160182831784 -0.291072852259168 0.904396703285141 -0.107250545062222 0.808916115145003 1.08957464272544
Rv0732 0.997225880952145 -1.06283122334733 -2.58617342201645 1.05120930475882 -1.08584621665959 -3.11021224826816 0.090639051605358 -2.79438821286992 0.730356681972905 0.327775988601659 0.934065656953856 0.74286909863547 -1.82588453856079 -0.894712097475392 -0.193956803466126 -2.23255556921053 0.359850227574445 0.529763269441455 -0.465586859629065 -0.092144533036029 -0.605614750128961 1.22375934037340 0.465896785382989 0.461907984153756 0.518081156728967 -0.583580415315925 0.805151532698685 -1.79797070428047 -2.02230108072731 0.840847887899742 0.803421847996732 -0.295023845983588 0.506017719465832 -0.367781322206676 0.00571023837728872 1.18124371741197
Rv0761c 0.99012808589991 -1.30152691612166 -1.55003902121721 0.753104213541382 -0.838551058022609 -2.59054010841801 1.39258238233594 -0.825884840246523 0.442496357358083 0.55120082200717 0.810109237340997 0.697516678094761 -1.13904400702908 -0.0831633422819994 -0.291806613431135 -1.90479191505747 0.008399153238372 0.691504253439053 0 0.336277336713534 -1.54558064677437 0.983159894643998 0.093782482422615 -0.114954612440493 0.874481135415626 -0.261754368124604 0.406830051445333 -1.6478267168187 -2.16900063836571 0.662842142004509 0.96170189346859 -0.793612948440102 0.465644483956947 -0.571929438015942 0.246900963104194 0.91760854401794
Rv2271 0.928033247206229 -1.48956342824974 -1.75760354980420 0.977577938578035 -1.02823509323503 -3.03453339110575 0.968271363657933 -1.88930338815152 0.873064528842577 0.575244618317969 0.510633054351134 1.18497026218986 -1.64637388437156 -0.526874834798086 0.00165195855409577 -1.77016167638916 1.17755339182442 0.870987868346296 0.187388619392235 1.27564851992851 -0.971414645183763 1.01221087909182 0.370658138906447 -0.326137710609302 0.613396751858828 -1.23829188161933 0.650498674822773 -1.82190695571507 -2.05474109723941 0.474291386628643 1.33481857156682 -0.110495176425071 1.16994350231331 -0.373841529575751 -0.638210731426724 1.80154325232988
Rv2272 0.69783354615494 -0.920258012349037 -2.58461019181877 0.77875456781285 -1.09630889612449 -2.90985508436998 0.226565753401585 -2.75958122913345 1.09606855491207 0.267009222081671 0.0170849785476906 0.746997429455734 -1.59697436546571 -1.05456335414411 -0.0370513633889442 -2.13576711259849 1.40075500342415 0.940759425013963 -0.032508250390735 1.09772648118619 -1.10557165317750 0.812969343986968 0.056914960650036 0.123923945546264 0.381092745742482 -1.77817403828348 0.0413268786810941 -2.20751735589881 -2.27974815165743 0.677572868022256 0.869206906438325 -0.325261845205571 0.820690839125363 -0.287510553802518 -0.351217077265365 1.51669660868627
Rv2275 1.02741293699814 -1.27828230372803 -2.37900151022435 0.648829539328013 -1.63650262273907 -1.27691905161420 0.944827970225149 -1.7683218630092 0.71873254681568 0.0808998458738142 0.377753759247949 0.729740036427482 -1.50535526785757 -2.54417179928206 -0.303705019978932 -1.62562939413395 0.89358946049362 0.718668667714338 -0.35877747888036 0.857907221220473 -0.728527232876031 0.96981605521309 0.0924483890254264 1.66001764722137 0.424835984856531 -1.66427645998597 0.329622768145093 -0.547826251369557 -2.07152764210129 0.0446333984099636 0.890653098397095 -0.948631076986542 0.111671360396225 -0.0826815093975688 -0.0301724289897712 1.54148187913739
Rv2276 0.191985924126796 -1.11423993662446 -2.00365439997803 -0.0431757047172959 -0.733895740533837 -3.17234353339712 0.215518338511181 -2.01441558458602 0.734774099027278 0.107929178090445 -0.239213536181248 0.832553191193257 -1.10522625322156 -0.88269390097207 0.26207766850117 -1.97382424824065 1.029164297301 0.81665466570766 0 0.171727766281018 -0.821419839497219 0.689985699833771 0.487808695479639 -1.40902953033529 0.272732358561715 -1.25617439612454 0.131672463072896 -1.42282232556935 -2.74340659882653 0.348048651702966 0.684139116792608 -0.653669524261966 0.507923294703552 -0.205404769400610 0.402790571955139 1.59712887645472
Rv2582 0.540482524475459 -0.940669034767416 -1.80386940206175 0.987464363467189 -0.825793117889812 -3.92732580957175 0.52599607160828 -2.35419720779899 0.866193432494648 0.32755992085768 -0.442251212347206 0.706201035505004 -1.3861206665854 -1.20307728859229 0.706809964171567 -2.87180275729619 0.67663176132182 0.947914992204018 -0.355856367357996 0.925073009663766 -1.07824050290408 0.449258936409722 0.41498617560192 -0.735670489731013 0.194385195278068 -0.794054968629842 0.360021713461805 -1.31167590348096 -2.2086378770461 -0.151465589441857 0.669595667232611 -0.694646810424473 -0.0754714947260397 -0.399441384046314 0.800182700424149 0.825747883762631
Rv2993c 0.742966009872519 -2.09579170489768 -2.64719497168028 0.80009622882219 -0.933382788075093 -2.80899206066594 0.383757490331476 -2.3491806229167 1.03324496084176 0.00195406596526879 0.0507105561332948 1.31716871681397 -1.92112361416164 -1.29303498895049 0.298010388499960 -0.741372843150204 0.619180746138049 1.36147174495378 -0.339281862998959 1.30825303464354 -1.32460676291769 0.758906129652267 0.249318736414960 0.555989097476816 0.832050156845072 -1.43529551634748 0.809064561529122 -1.34720555850715 -2.33450112035215 0 0.930038648010943 -0.776166026155572 0.48347333704919 -0.86871810707872 -0.473784984080619 0.8833372075348
Rv3598c 0.910403762506797 -1.59650380234214 -2.50667687592811 1.05066433489487 -0.559849233434326 -1.99175366095039 0.92674136169412 -2.54456148620048 1.00854799233830 0.127743497630881 0.664588346757449 0.942647552277198 -0.918918482709964 -2.00087679699058 -0.175865467352589 -1.97801831828624 0.350127770403718 0.856902792048783 -0.578178013530681 0.946346969201702 -1.53876648706024 0.429872584124561 0 -0.753243450074427 0.544652959102242 -1.36926907773327 0.319172045486035 -1.28475009495829 -1.61840564008304 1.09225719685232 0.928167761835581 -0.476357063695295 0.442511453535425 -0.414183257698087 -0.152924562435619 1.29657859829278
Rv3747 0.621921922573435 -1.38770475773498 -1.29350186046875 0.626698994303628 -1.22652879201646 -3.33865947665992 0.738698368293176 -1.94245326048902 0.835459466603171 0.593003463441777 0.903166511943858 1.14585344928827 -1.80233243059320 -0.82062225962026 -0.89689958097068 -2.54075020550103 0.400940903270345 0.804410785245798 -0.505258642421662 1.11156690928125 -1.23043349958651 0.950526093017417 -0.327820580692663 1.67859157701275 0.65249683822082 -1.12511411528953 0.157707964220220 -0.713352829002746 -2.53474088475891 0.765998783895466 0.610286648134956 -0.986070994882464 0.530983721598693 -0.874415503205182 0.0339769345926035 1.45239144612394
[+] Show/hide bicluster #89 motif PSSM #1. bicluster 89 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 1 0 0 0
2 0.142857 0 0.142857 0.714286
3 0.285714 0.714286 0 0
4 0.285714 0 0.142857 0.571429
5 0.428571 0 0.142857 0.428571
6 0 0.428571 0.571429 0
7 0.857143 0 0 0.142857
8 0 1 0 0
9 0 1 0 0
10 0 0 0.857143 0.142857
11 0.142857 0.285714 0 0.571429
12 0 0 1 0
13 0 0.428571 0.428571 0.142857
14 0 0 0 1
15 0.428571 0 0.571429 0 [+] Show/hide bicluster #89 motif PSSM #2. bicluster 89 motif PSSM #2 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0.454545 0 0 0.545455
2 0 0.272727 0.727273 0
3 0 0 0.090909 0.909091
4 0.090909 0.363636 0 0.545455
5 0 0 0.909091 0.090909
6 0.636364 0.090909 0.090909 0.181818
7 0 0.181818 0 0.818182
8 0 1 0 0
9 0.636364 0 0.181818 0.181818
10 0.181818 0.727273 0.090909 0
11 0 1 0 0 |