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[+] Show/hide bicluster #88 rows and columns.
bicluster 88
Mycobacterium tuberculosis H37Rv
22x37
[+] Show/hide bicluster #88 rows (genes).
bicluster 88 genes
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #88 rows (short gene names).
bicluster 88 short names
Mycobacterium tuberculosis H37Rv
22
short_name
[+] Show/hide bicluster #88 rows (long gene names).
bicluster 88 long names
Mycobacterium tuberculosis H37Rv
22
long_name
[+] Show/hide bicluster #88 rows (NCBI RefSeq gene IDs).
bicluster 88 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
42
[+] Show/hide bicluster #88 gene upstream sequences.
bicluster 88 upstream sequences
Mycobacterium tuberculosis H37Rv
22
upstream
[+] Show/hide bicluster #88 columns (arrays; conditions).
bicluster 88 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #88 ratios.
bicluster 88 ratios
Mycobacterium tuberculosis H37Rv
22x37
GENES Amikacin Amp BZA Cap CCCP Cephalexin Clotrimazole Deferoxamine DIPED Dipyridyl DNP DTNB DTT Econazole EMB GSNO GSNO_CFZ mercaptoethanol methoxatin Mtm NRP_1 PA_1 PA_21 Procept_6776 Rif Rifp SM starvation Tet TRC TRZ Valinomycin Verapamil X_111891 X_121940 X_124196 ZnSO4
Rv0198c -1.56805151109914 0.394497933979957 0.306948708308526 -1.10453754830047 -1.56794554979923 0.331095411332493 0.268955407226272 0.326132593871578 0.972027925035377 -0.138467149997636 -0.929752693405886 0.651895209315102 -0.214139167510067 0.391371096489457 -0.0280944116908428 0.998757765001556 -0.108239083083519 1.01354473078717 0.446756522264124 1.04466882793767 -0.357996092164558 0.669274296482591 0.980418613682877 -1.32916609321343 -0.399870771451913 -0.988872735832852 -0.600954468112208 -2.16370443134125 -2.12911307498873 -1.20033195987877 -0.738314626899836 -0.403131521429697 0.475827222527925 0.85980481981559 0.229264376851398 1.00367070716443 0.682944602849154
Rv0404 -1.44775331954067 0.59851278988698 -0.306913151567446 -1.77472248939145 -0.650074080764951 0.444757554583351 -0.0792465036192916 0.653995062696968 1.12791535732789 0.063296626711666 -0.787932706980451 0.583023502897131 -0.204169811530322 -0.166200332443767 0.46915307886157 1.20105432369973 -0.226593063032256 0.303862423674622 0.668017215579924 0.91473577272261 -1.22404450957287 0.618862109463275 0.392960946980983 -0.255543613519464 0.970074790945446 0.922317427381175 -1.32179057346141 -0.471222375795123 -2.55996787449902 -0.956253035750174 -1.51045026632239 -0.9191249680967 0 0.568804698054153 -0.315422597057059 0.602506769485403 0.76232248397436
Rv0464c -1.00446976000224 0.409409891056439 -0.355050191238039 -1.65144604551094 -1.59719629730105 -0.0626451638780209 0.303426297477831 0.819425754783255 0.386090448035368 1.26409155163893 -1.36712797820958 0.333577595795398 -1.94619886127961 0.323893074757738 0.0408684057334974 0.520727673284765 0.408101134117424 0.676644436903169 0.455101254695597 0.652054214162652 0.46974356256667 -0.660412666819225 -0.227207083579097 0.308603035204131 -0.869380238089279 -0.155367733284428 0.860593039022991 -2.05313870174210 -3.00987909466339 -0.96709013242121 -1.3039925037765 -0.924641297229138 0.372983867688478 0.536219956230003 0.350194744296053 0.393948170725303 0.453867887218829
Rv0734 -2.32379338639018 0.757389177885118 0.447001383119116 -2.03702648175350 -3.21275077235368 0.661104626413355 0.0348223872671113 0.780216156864694 1.02012927565560 0.249708331889982 -1.92145045652889 0.259574561272986 -0.419209604437645 -0.0356514817981824 0.403323843237410 0.293418964469699 -0.124662731587432 0.388902875845244 0.484636239802208 1.02339987838612 -0.72792341491159 0.969383365689021 0.500488607621888 -0.447434025366215 -0.128461646468540 0.108325025730194 -0.256561923023892 -1.32424538927639 -2.00723088059955 -1.17312264897861 -2.25110731010368 -1.77788324606694 -0.258208556949813 0.97163726794791 -0.667544931738966 1.08675896184781 -0.0162463500435309
Rv1200 -1.82369986630166 0.201343938191646 0.0164511410081002 -1.6790678419904 -2.04381540109335 -0.0864281934041297 -0.30907307105845 -0.0662456019138683 -0.134624829630929 -0.0405194020724879 -2.22597166461507 -0.0707569956586817 -1.23962259297105 0.0700519474767725 -0.0948477377640779 -0.252037513334759 0.837537858018553 -0.306406702920518 0.309257018633805 0 0.696480077832497 0.287936276945757 -0.40494287365679 0.0377187556466625 0.470187089136763 0.683000023872821 -1.25840008251847 -0.376068817344662 -2.16035242388687 -0.109516479561004 -1.37024804585359 -1.33175602219075 0.792676288025105 -0.613375768254862 -0.534748401087223 0.42234516408569 0.838886366209329
Rv1275 -1.96267643742741 0.517488643328303 0.189032896596609 -1.83109653370085 -1.41462659857976 0.355134796485203 0.322136927187752 0.276128457367716 -0.19335846692366 0.482642883145692 -1.47010428053539 0.138197803695415 -0.355539908361902 0.76372772811304 -0.278277078420800 0.103175897424571 1.10017011978938 0.232899496241529 0.203960688380371 0.0259646663515366 0.285603144818301 -0.137420503317095 -0.475538271012115 -1.04035086488779 -0.706179330504141 0.00802500119041114 0.131268528974417 -1.20556006392504 -2.45456961169944 -0.476781820933654 -0.272990168103934 -2.12776516278055 0.459004584532448 0.338949186792614 -0.306085579992722 0.857982845166981 0.47005999385684
Rv1502 -3.07618052266738 0.42761682976227 -0.61955804311203 -1.25064161853672 -1.58753175726996 0.195077856948177 1.10079010353385 0.128049812733736 0.92221094093028 0 0.182457997753460 0.527047478135747 -0.00916581695059442 1.14288928853210 0.359855398637423 0.350553661507743 0.690901195516043 -0.091870448004591 0.584423818906264 0.742782714644363 -2.02627106915085 0.439124967458321 0.527130724759262 -0.063379493752963 -0.061616251176075 -0.158474655245719 -0.809897954433717 -0.0615857619618539 -2.41726642045288 -1.65016396228305 -1.14220534289569 -1.93377948977584 0.292433973122401 0.549256186258616 -0.452514153269757 0.317621495363470 0.451080275824082
Rv2082 -1.91792099285590 0.518167947342586 -0.961543736988695 -1.20379574132895 -2.89532949875024 0.294893336209266 0.45081285544342 0.385085149066886 0.529896232608179 0.216568623838747 -2.24010585367241 0.293864220349365 -1.76861892276088 0.417906721378622 0.269967256827368 0.982321131431217 0.781785939375732 0.380453671889353 0.688928573249775 0.540205475696674 -0.645073305969952 0.42557093166321 0.727684180536223 -1.22890796283351 -0.766668862664768 -0.517438857041038 -0.43058104547457 -0.413137307387433 -2.6297753715464 -1.65669228196656 -1.21824127416503 -2.09109763564250 0.907097876869963 0.58555664048459 -0.0717676784095533 0.571935537338985 0.889923385786992
Rv2135c -0.763774878324965 0.191931488442118 -0.280932806971487 -0.902167094905903 -2.73146200936860 0.166409921155691 0.587421950057358 0 0.103050683460098 -0.209297986381369 -1.19197858789595 0.0378248085758747 -1.72533128282889 0.574254123494741 0.0641893901684226 -0.0579494024096553 1.18807682325180 -0.189117502879134 0.568888039506415 -1.27250035351184 -0.469018088171786 0.196638491869542 0.414898148045515 -0.270587058219082 0.0772188949736822 -0.741515988765163 -1.03801208295431 -0.592660638201303 -2.51085517143122 -1.36868485171329 -0.363892157062977 -2.03642754513225 0.998166108368975 -0.00108027864378227 0.0409214573125338 0.0196585649018684 1.46938789450858
Rv2243 -0.494507123939069 0.400795517573836 0.086858197846993 -1.14831790623388 -1.91296330643312 0.0277903824329120 0.0252791246231296 0.464817646128727 0.241300539735473 0.0724572338949964 -0.598338775663295 0.387887283301859 -2.05568468622461 -0.286280085093222 0.740696275887762 0.599753230711945 0.215138042282270 0.449298855431743 0.178884401439905 0.441862972237607 0.564754066361937 0.197843430816154 0.247123355001842 -1.26838220730197 0.0891866401068009 0.0873633904640996 -0.200994257462678 -1.30459217718633 -1.29996334513749 -0.738823498214616 -0.527580783550887 -1.38634445201967 -0.217540622336601 0.421204067307765 -0.980270765438882 0.0137511150589245 0.287852878941436
Rv2244 -1.73244419960065 0.919293687608464 -0.203386277447858 -0.898743795891411 -1.12296891360204 0.736047650310968 0.317446653407375 0.522886693872386 0.30913618343858 0.423014479579957 -0.519372632755664 0.373340356675735 -2.07864609874795 0 0.862993395612147 0.848668826091103 0.713986523391491 0.490258634054123 0.199173240299150 1.15695530333427 1.11763825395969 0.859628801025574 0.702303958561164 -0.496205167723618 -0.868630345921484 -0.525263615249167 -0.754188410457737 -0.999628138547402 -1.8031510002632 -1.07955006870215 -0.237128554970092 -0.685940251785595 -0.215484573098537 0.638431737031363 -0.574409280147937 0.368650335328887 0.503504469508979
Rv2246 -2.37307752052632 0.648451601934545 -0.51072973300292 -1.97660724789462 -1.56319739991174 0.331253710294117 0.393351125257183 0.479863628472807 0.0578109080556438 0.426040625023615 -0.427619945854305 0.417863158249291 -1.58933819642428 0.150457292523093 0.476429190619332 0.593544676528814 0.797701376821937 0.43068767897262 0.113259122892075 0.804821116412976 0.177397094786467 0.409675364222061 0.258655590966209 -0.438631275992610 -1.25312375982258 -0.407176848298054 -1.07939168449078 -1.41947514410698 -2.03565475888551 -1.41196623828184 -0.403637546303602 -0.960632510799767 0.250573934590394 0.626170483101014 -0.536961959391506 0.500396615101062 0.0981146947030958
Rv2247 -0.387770733345222 0.417662652309433 -0.0679839364783148 -1.71868994108232 -1.15477733151338 0.494982269574804 0.315776913064104 0.0972417541812135 -0.193334202494781 0.50086478972214 -0.60268068849704 0.349116583727808 -0.961429462722394 0.134105733664568 0.713519333907544 0.330015206526124 0.764467001921365 0.108820780118763 -0.186475593094043 0.39443942477839 0.592535350107915 -0.0525923725442877 -0.515753174609771 0.251494081142512 0.32248897360935 0.047298840120267 -0.019379854671661 -0.665656891730657 -0.378983056031411 -0.549533176191657 0.0508183731165093 -0.864181384692255 -0.000192865193458476 0.353722066994123 -0.410927648293778 0.287967606870307 -0.338742575498268
Rv2524c -1.77675245168801 0.0956880440563107 -0.681103147936385 -1.57943925589974 -3.28454537329992 -0.758389606207225 -0.255922724453848 -0.286890441628501 0.0612403035912125 -0.187734532129668 -2.20149271395137 0.190720390167242 -0.393064186853354 -1.07531413257263 0.246123207416365 0.42767953018659 0.637083934941187 0.381434293738273 0.466090168015125 0.861611218795734 0.164381814123441 0.397027715263104 0.431857154763949 -1.16118050065094 -0.369812251959119 -0.228505406814161 -0.734737159865145 -0.627538787890295 -1.41815762767594 -1.21563088588109 -1.45441732256535 0.389149030884685 0.143867479447810 0.171149419573345 -0.547944550092176 0.239799687103939 0.253044922307870
Rv2846c -1.75373785811881 0.574386777402704 -0.171790019459827 -0.534630481119125 -1.55577373310591 0.147356436813326 0.239760877443022 0.342859418054359 -0.0402892718679646 0.153095233310130 0.189600143254101 0.331661760516174 -0.714547230481073 0 0.98460360807502 0.494381712366482 0.607217006281996 0.302997650423723 0.355888917514532 0.942509937622732 -0.389440916464058 0.0600224664205751 0.438583560285879 -0.156683010664895 -0.939130121272405 -0.172497415219188 -0.724491572512033 -0.855088855414545 -2.25027585007248 -0.826536829800189 -0.461435216088099 -0.755544146678884 -0.186739885462690 0.281169337340753 -0.784101715993122 -0.111063932082834 0.12050226206823
Rv3248c -1.68945659666129 0.517147487186626 -1.79224437402459 -1.00932333866486 -1.23194366635850 0.059060867731057 -0.501733775628136 -0.00432039132869927 0.505591182039615 0.232720243710295 -1.63718716307427 -0.0174596429215196 0.230165219059923 -0.371653005559879 0.505275211921262 0.122660741117757 0.265151512229048 0.629530231353313 0.085109585559262 0.738042235084338 -0.0986811608018147 0.322437461723485 0.277065200504384 0.0870847504240938 -1.68919587051103 -1.70505942264047 0.439476182916932 -1.13403794988711 -1.20471082706269 -0.77546042421068 -1.20487182922076 -1.09036537021947 0.178072182599912 0.102330289777738 -0.316621151722819 0.182026856064597 -0.149018585130431
Rv3262 -2.26022417957427 0.479952402371232 0.383773603452602 -1.36165847044717 -1.52345217910790 0.727456251023072 0.993739565834131 0.665030512141234 -0.0624301257448369 0.317764502084861 -1.89512017947784 -0.526883841307259 -0.693206347449415 0.751325112273386 -0.112257996098214 1.26838548905702 -0.0893856163556353 0.485535536957832 1.47167643800104 -0.17980457229134 -1.98087169871924 0.552787776726007 0.723904074648339 -0.821269541635215 0.472493100728028 0 -0.946915098514848 -1.28321289704251 -2.81422330075746 -0.805429726713813 -1.37346963466128 -1.82775374581847 0.870660017616419 0.893912334525548 0.443736074368203 0.704131771697348 -0.0893856163556353
Rv3285 -2.57215318790291 0.477080756664141 -0.733691435078327 -1.82163039256548 -0.918937641878229 0.0970118149293472 0.0751791902286361 0.538578572736717 0.664256043968128 -0.254601744899767 -0.775051428794528 0.39773812732335 -1.03730501970515 0.155844538676951 0.65612271178671 0.602807558617825 -0.203165594372821 0.466367864513937 0.608830008424832 0.371551468128688 -0.000425166983437758 0.272843988937121 0.332465581944652 0.240548985920255 -1.86999317889047 -1.55872252693616 -0.0527269007103647 -2.6180713087391 -3.5413017640369 -1.45045270552190 -0.319367429505295 -1.47671856370880 -0.0332520545451887 0.56008554515393 -0.642620755150248 0.288736655652568 0.603647323262516
Rv3295 -1.01446509835563 0.290052911797032 -0.0751743977885517 -1.19136189118127 -2.23635475384025 0.763592436308702 -0.140932163946347 0.570790397838487 0.148017440945299 0 -0.801176255209017 0.790547171959477 -0.580662710604638 -0.156447203132877 0.526650266904968 0.85744642972457 0.627672948280339 0.788993551250966 0.317403030799470 -0.292690671702347 -0.165508986804463 0.488481612077544 0.400586965110906 -0.635924430682739 -0.769134393811295 -0.689685584157334 -1.13203570675066 0.535846396281913 -1.73227474886405 -1.36822594491573 -0.633765910225378 -2.35845935366457 0.817558976115273 0.555608912532338 -0.177165356887812 0.213685061857999 1.10449862372692
Rv3671c -1.59712089437639 0.611127298103102 0.201212435701632 -1.47038974937319 -2.32253891646774 1.15488577820270 0.423230531826141 0.553721492946122 0.681595327830768 -0.0844239539332132 -2.27999649503965 0.710352644565412 -1.75438645879909 -0.0304003316394690 0.204835185574513 0.911711801195305 0.112343305979106 0.544045823901329 0.641377824505149 -0.102522362558431 -0.625305165098691 0.358203695780196 0.0495864839181954 -0.574432180547368 -0.81212426692581 -0.195397291727419 -0.419396980234209 -1.67569585546499 -2.45898154036941 -1.05447636317696 -1.48034908950175 -2.24741401694449 0.282219599912317 0.568433388155941 -0.224737935545537 0.462025185291254 0.0873255627329204
Rv3799c -2.47668348093906 -0.0973317788822555 -0.0360941817024593 -2.10869747587326 -2.25548852650266 0.297573486834054 0.158227284471095 0.404756756049954 0.322812120001060 0.513264865036673 -1.18511440957427 0.327632196023666 -0.853303247947627 -0.343841705707193 0.268488956432455 0.436540684928414 0.600616817376281 -0.0585947306606237 0.254598691920094 0.180083389356026 -1.04128803260150 0.265671248291002 0.630298373214744 0.169120316309585 -0.0168159587818335 -0.067080619883317 -1.00509891796590 -0.626944976860573 -2.20816542594860 -1.43471925947278 -1.05890905482493 -2.86303898854499 -0.231100570757509 0.556925309183748 -0.446569481808059 0.411098481987086 0.705871230389198
Rv3800c -2.58282004399498 0.122791504196012 -0.127997215192295 -2.49536951704662 -2.10863268630031 -0.217148998976253 0.105625354471483 0.107791356830432 0.370539874842287 0.568413883389965 -0.762497913428046 0.0108077221075955 -1.25132841815587 -0.160201389383981 0.399200096648044 0.163720872266756 0.44364606662159 -0.324634973964947 0.227235642631753 0.423223171042978 -0.395123227079504 -0.0685465021253148 0.0644638288729946 0.173709910641052 -0.205641653627001 -0.462696836210093 -1.08302316691860 -0.701651715128894 -4.1751323777061 -1.54120315978334 -0.767324389358097 -0.888309029619748 -0.322116433688685 0.198617658577230 -0.0602869767822704 0.0214043195712558 0.273132624121547
[+] Show/hide bicluster #88 motif PSSM #1. bicluster 88 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 1 0 0 0
2 0.833333 0 0 0.166667
3 0.833333 0 0 0.166667
4 0.833333 0 0 0.166667
5 0 0 0 1
6 0 0.666667 0.166667 0.166667
7 0 0 0 1
8 0.166667 0.333333 0.5 0
9 0 0 0 1
10 0.166667 0.166667 0 0.666667
11 1 0 0 0 [+] Show/hide bicluster #88 motif PSSM #2. bicluster 88 motif PSSM #2 Mycobacterium tuberculosis H37Rv 14x4
POSITION A C G T
1 0 0.625 0 0.375
2 0.125 0.875 0 0
3 0.875 0.125 0 0
4 0.25 0.625 0.125 0
5 0 0.875 0.125 0
6 0.25 0.25 0.25 0.25
7 1 0 0 0
8 0 0.875 0.125 0
9 0.875 0 0.125 0
10 0.875 0.125 0 0
11 0.375 0.5 0.125 0
12 1 0 0 0
13 0 0.875 0.125 0
14 0.5 0 0.25 0.25 |