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[+] Show/hide bicluster #87 rows and columns.
bicluster 87
Mycobacterium tuberculosis H37Rv
15x36
[+] Show/hide bicluster #87 rows (genes).
bicluster 87 genes
Mycobacterium tuberculosis H37Rv
15
[+] Show/hide bicluster #87 rows (short gene names).
bicluster 87 short names
Mycobacterium tuberculosis H37Rv
15
short_name
[+] Show/hide bicluster #87 rows (long gene names).
bicluster 87 long names
Mycobacterium tuberculosis H37Rv
15
long_name
[+] Show/hide bicluster #87 rows (NCBI RefSeq gene IDs).
bicluster 87 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
30
[+] Show/hide bicluster #87 gene upstream sequences.
bicluster 87 upstream sequences
Mycobacterium tuberculosis H37Rv
15
upstream
[+] Show/hide bicluster #87 columns (arrays; conditions).
bicluster 87 arrays
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #87 ratios.
bicluster 87 ratios
Mycobacterium tuberculosis H37Rv
15x36
GENES Amikacin Amp Ascididemin_Natural_product Cap Clofazimine Clotrimazole CPZ Econazole EMB Eta GSNO_CFZ GSNO_menadione menadione mercaptoethanol methoxatin Min_med__succinate_ Nam NaN3 Nigericin PA_1 PA_21 Palmitate Procept_6778 Rif Rifp SM Tet TLM TRC TRZ Verapamil X_111895 X_241 X_59 X5CL_PZA ZnSO4
Rv0006 -2.39605561251168 -0.0226503584323237 0.273694065207949 -3.69279568429445 1.14711632396836 0.861910033998796 1.14967253880111 0.618225243273533 -0.218014531032231 -0.0315665197846768 0.295970988638064 0.48174361626035 0.055543353129434 -0.150625299628431 -0.327149937381060 -0.806761316519573 0.170714130842520 0.131809985483920 -0.133298666673609 0.56696749340044 0.419621470662382 -0.757450694651047 0.348285278972936 -1.01565936537561 -0.749069346792063 -0.624090816152075 -2.42379335780598 0.184771945665902 -1.08420104103601 -0.237510435440101 -0.222339617866004 0.391110763045639 0.628804680457539 0.436442610580224 0.824446442255343 0.107396552964440
Rv0931c -2.48240320124580 0.00231384602967809 0.0675667912626269 -3.14628716102229 0.633963804526328 0.437677344332492 0.0378656250441175 0.516731455259516 -0.265031588755268 0.0306801103729371 0.0254713395472451 -0.216949487918941 -0.663460543216121 0.00237302631615180 0.147426728482662 -0.13574720615034 0.482184183990562 1.15429997067954 -0.503498078321358 0.702535173270694 0.605085186972334 -0.240235288500864 0.259500788329083 -1.15549015358855 -1.08648593764963 -0.528770438365291 -3.43463730920345 0.298066967537251 0.0200604835667265 -0.736157115145479 -0.243714359503083 0.0605804481082789 -0.322363758470374 0.018853134075827 1.38056959139575 0.0101758033163922
Rv1422 -1.84742395077058 0.36226753179078 -0.283736020720131 -3.10385231283735 0.0339703011246851 0.0700473087983376 0.290779049203542 0.328592987960280 0.00841568353247027 -0.227760016732148 -0.181748725875289 -1.57049773356216 -0.257786109863205 0.231765754075628 0.544001275913457 -0.94037257065076 0.921489202547615 0.978487256188417 -0.482861328373647 0.546549358090083 0.321564219814227 -0.262616010359598 0.874398194736911 -0.806835954849216 -0.627102310952139 -0.676481326511299 -2.93151506401566 -0.287818144700794 0.453286302244337 -1.32289150587764 0.419662292525181 -0.446843265280621 -0.5022219724826 -0.65129072756375 1.56455891510758 0.236891820305663
Rv1448c -2.75463202746290 -0.125531978322905 0.181888416935874 -3.43377788295765 -0.0242138386323677 0.121531143094206 0.0310631805936515 0.150620705668017 0.284780733242593 0.0909697814963181 -0.547383520622602 0 -0.595737253766451 -0.36287576811632 -0.402569522154404 -1.31123349120191 -0.0794420598879142 0.377431626088353 -0.0538030770582715 0.576852703868169 0.722095863509392 -0.474970135726643 0.222163872277252 -0.4481909602995 -1.73041964557391 -0.729261147690028 -4.43994425569729 0.158039598615906 0.446858795169995 0.210994865133724 -0.200580597805125 0.229339752712202 0.166178782481180 -0.152787703011910 0.209254587159087 -0.277671851536450
Rv1449c -1.06537114629473 0.168615423788454 0.579436008240212 -2.25938611185445 0.54708329086858 0.0113709125295361 -0.216060270761451 -0.00588433960783025 0.0749503141612934 0.426245303571095 0.0126926917151858 -0.174786779613022 -0.76095067112603 -0.193334547531909 -0.226892193338562 -1.15771006310278 -0.569707113002823 0.557837232319087 1.36422650303181 -0.283993743902643 0.00234293973678734 -0.48220655148923 0.984292130161925 -0.823985263415348 -0.803854410744344 -0.00507335981891525 -3.02493680987097 0.289759397863910 0.82686268714112 -1.01273685210010 0.0535724500876185 0.5440140041298 -0.0772423215563439 0.207849521085317 0.742591849372822 0.222491518593392
Rv1676 -2.06904588418066 -0.137816561902439 -0.154226392133691 -2.04494632518279 0.412203107552084 1.05709918421547 0.545687900857812 0.666720874827421 0.262152848880053 0.0468919189794299 0.237837761646377 -0.196906252348022 -0.301050840900915 0.715058418897784 -0.176683140059899 -1.55852366223618 -0.088772210959423 0.987397501900023 0.69671724534195 0.975009049372414 0.667809726659815 -0.240376780333087 0.522180176081492 0.429284487589249 -0.558666814071698 -0.352464450331773 -3.49772401285436 -0.128770587791952 -1.03085804564263 -1.19144128814490 0.648392765018292 0.166667460159012 0.49468728304595 0.40825986749573 -0.301052764748757 0.673530057425662
Rv1700 -2.67400854675026 0.290836226491622 0.232640322412031 -2.80991115911601 0.985101167532537 0.682509591742093 0.966444152672513 0.213866024151689 -0.191016471812077 -0.74613167510349 -0.0261060360556366 -0.89311115479124 0 0.114913043865557 0.0362719479569112 -0.775798213086842 0.152394685300219 0.0901515005301459 -0.695947424855083 0.535277213083243 0.660462178375455 -0.211105565530928 0.846491751369298 -0.524765166433792 -0.826234954719515 -0.635641514165561 -4.2497206319922 -0.406409547173606 0.44022285282883 -0.138679025759550 0.48806920231346 0.308289555449816 0.371130834064707 0.72221250521935 -0.400327529499713 0.404030326572822
Rv2109c -2.16809849789417 0.287208210643933 0.525962010910372 -2.06120268880943 1.48154980259855 0.329598314343764 0.91963675349321 0.36032034673044 -0.345780261574763 0.238070234089676 0.37620150148158 0.254799834277606 -0.097758846301666 -0.196608090668721 -0.189282229237680 -1.64654478077396 -0.349117939233985 0.404255262518544 0.0467238719920186 0.130342896704518 0.264251612449838 -1.18182060426337 0.573792852879566 -0.80482248857132 -0.75814273854456 -0.392158327197173 -2.63563360160653 0.131770265654002 0.139246781960437 -0.282773113843657 0.41451586792824 0.26352032152145 0.349435705444405 0.511512375726878 0.317715569935236 0.307864111116688
Rv2207 -0.594335406925975 0.429991433304812 0.409548543348373 -2.70667334271283 0.561806726730969 0.455833890196313 0.431629022938470 0.662293209493981 0.432406681736542 0.447216433725809 -0.616014923516264 -0.113637337270811 0.523169763851024 0.268900502033255 0.315848285748964 -1.80711545444728 -0.103396713476242 0.923160419961394 -0.00843281559085564 -0.110924039462988 0 -0.173654402280074 1.25287914905694 0.880503240787531 -0.688417811896561 -1.05772608765208 -3.32141167642234 0.517848373698841 -0.639214321852586 -0.119043720863663 0.112508642513065 -0.51898691585328 0.555000368443973 0.736456813154444 0.360737659229535 -0.457840170469942
Rv2475c -2.13880474453651 0.721368983861169 -0.252172985332047 -4.03134299427896 1.13471446956056 1.02278030531131 0.45852741936849 0.819295024046135 -0.155008754981399 0.221464603789589 0.0875538162267922 -0.537141604166028 -0.81578436707273 -0.13303520155327 0.504703759000882 -0.775628793438895 -0.134559843040963 0.692965862639358 0.550878410362354 0.134601465284736 -0.0494736556218035 -0.0213859410478599 0.359239602146994 -0.499393288985878 -0.310948497827988 -0.802474282698656 -3.68285139973434 0.302013362181162 -0.491944138404475 -0.775395375869248 0.354404175035611 0.132490021786815 -0.188022599437015 -0.0958944336349918 0.242937590978986 0.512163757691621
Rv2476c -1.64221511406570 0.262968309976696 -0.139350904588241 -3.26955334442027 0.64213513220061 0.593536738300111 0.509747031234368 0.988068460502484 -0.102953094690274 0.362199021967182 0.238901664060678 -0.457542487102514 -0.833668829036287 0.224867454214782 0.470883437886262 -1.41750613537677 -0.343704736943955 1.32385025035362 0.439803548616637 0.974502748446147 0.872504842528302 0 0.273493311124948 -0.172591241200905 -1.36662971075614 -0.666707961953042 -4.25548475146389 0.307732755391179 -0.248093663772091 -0.587568899408447 0.378954021310354 0.136981290870430 -0.0453910394914949 0.161798200504325 -0.548254383408005 0.427987891585826
Rv2553c -1.92063663388226 0.342969393819164 0.269121487625055 -2.3627018850145 0.696969333708301 0.124241746986146 0.910515349986584 0.098292559818857 -0.101977242223931 -0.0787837365470384 0.642638732179826 -0.226541900599405 0.0226159004090540 -0.0971113377025069 0.185261485334817 -1.79913191054472 -0.204585762008607 0.462717542020880 0.127116727225168 0.0375638697192049 0.142595249508049 -0.473039137045873 0.748279608950879 -0.860132385707035 0.0238331044126069 -0.0272999432737481 -4.56133979113121 0.00790018617495798 0.0158356419265807 -0.538399142702354 0.222866072071450 0.297353086139713 -0.0072985552237355 0.086004578486952 0.0151734849896523 0.498066191278315
Rv2790c -1.75359461411333 0.287624631249187 0.179054092631957 -2.31837551403732 0.643536684226387 0.147258922643074 1.12235692148608 -0.0149613166210001 -0.35480501728632 -0.324080053146708 0.612559760295246 0.850517634997654 0.0992325039974316 0.389934894819294 0.0242821699614224 -2.61337713441322 0.0597490775079592 -0.123247996046641 0.179603113073375 0.120512077328236 -0.0141011535617567 -0.739873250798001 0.0542386688000596 -0.966002156956437 -0.679259157117379 -0.785794235835762 -3.15626449009126 -0.218149204061216 -0.550137211173294 -0.636106593357495 0.0026881031271725 0.367283042064442 0.103856216818229 0.174975451362755 0.857015093977283 0.150492955148560
Rv2791c -2.06595728624780 0.245267725651665 0.0507155210853612 -3.70629504679232 0 0.209985051044451 0.857757896764555 0.335270012193927 -0.293259429502014 0.508715938163453 0 0 0 0.762773347019628 0 0 -0.232356605551218 0 0.363437394160469 0.33479008834997 -0.4786852270254 0 0.510061209949597 -1.2559104163979 -0.271665992715140 -0.784296552335823 -2.02779974039230 -0.000488797993260363 -0.121961445437885 0 0.334490636209229 0.227192320138383 0.253930619059026 0.198588036160411 0.350914345926232 0
Rv3813c -1.34784055849700 -0.151840053850891 0.339668238139221 -2.58074597244108 1.54815554996472 0.604033612819893 0.364314562287271 0.403383651920427 -0.65761688863554 -0.0233368647406422 0.259977491525239 0.256005426493128 -0.455050530109557 0.0329948810404681 0.95798931498754 -1.68425470762146 -0.309743274108276 1.59319335146809 0.574147865358885 0.132162808701650 -0.354694018188177 -0.488118983800234 0.631518521704788 -0.661630979565351 -0.203950279224516 -0.329143980316879 -2.20611674228798 -0.000675558694480616 0.746938721968158 -0.250571074623315 0.591027472605011 0.477880036133496 -0.424043397743527 -0.508547446719596 0.364385923914249 0.337513441428934
[+] Show/hide bicluster #87 motif PSSM #1. bicluster 87 motif PSSM #1 Mycobacterium tuberculosis H37Rv 17x4
POSITION A C G T
1 0 0 1 0
2 1 0 0 0
3 0 0.833333 0.166667 0
4 0.333333 0.666667 0 0
5 0.833333 0.166667 0 0
6 0 1 0 0
7 0 0 0 1
8 1 0 0 0
9 0.166667 0.333333 0.5 0
10 0.166667 0.333333 0.5 0
11 0 0.333333 0.666667 0
12 0.5 0 0 0.5
13 0.166667 0.166667 0.333333 0.333333
14 0.333333 0.333333 0.166667 0.166667
15 1 0 0 0
16 0 0.833333 0 0.166667
17 0.5 0 0 0.5 [+] Show/hide bicluster #87 motif PSSM #2. bicluster 87 motif PSSM #2 Mycobacterium tuberculosis H37Rv 23x4
POSITION A C G T
1 0.2 0 0.4 0.4
2 0 0.3 0.3 0.4
3 0.6 0 0.3 0.1
4 0.8 0 0 0.2
5 0.2 0.1 0.6 0.1
6 0.5 0.1 0.2 0.2
7 0.1 0.7 0.1 0.1
8 0 0.5 0.5 0
9 0.6 0.2 0 0.2
10 0.1 0 0.8 0.1
11 0 0.6 0.2 0.2
12 0 0.8 0.2 0
13 0 0.4 0.5 0.1
14 0.1 0 0.1 0.8
15 0.2 0.2 0.2 0.4
16 0.3 0.5 0.2 0
17 0 1 0 0
18 0 1 0 0
19 0 0.2 0.8 0
20 0 0 0.4 0.6
21 0.1 0.7 0.1 0.1
22 0.2 0.4 0.3 0.1
23 0 0 0 1 |