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[+] Show/hide bicluster #85 rows and columns.
bicluster 85
Mycobacterium tuberculosis H37Rv
10x37
[+] Show/hide bicluster #85 rows (genes).
bicluster 85 genes
Mycobacterium tuberculosis H37Rv
10
[+] Show/hide bicluster #85 rows (short gene names).
bicluster 85 short names
Mycobacterium tuberculosis H37Rv
10
short_name
[+] Show/hide bicluster #85 rows (long gene names).
bicluster 85 long names
Mycobacterium tuberculosis H37Rv
10
long_name
[+] Show/hide bicluster #85 rows (NCBI RefSeq gene IDs).
bicluster 85 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
18
[+] Show/hide bicluster #85 gene upstream sequences.
bicluster 85 upstream sequences
Mycobacterium tuberculosis H37Rv
10
upstream
[+] Show/hide bicluster #85 columns (arrays; conditions).
bicluster 85 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #85 ratios.
bicluster 85 ratios
Mycobacterium tuberculosis H37Rv
10x37
GENES Amikacin Amp Antimycin Ascididemin_Natural_product Cap CCCP Clofazimine CPZ DCCD Deferoxamine Dipyridyl DTNB DTT GSNO_CPZ GSNO_KCN KCN Levo mercaptoethanol methoxatin Mtm Novobiocin PA_1 PA824 Palmitate pH5_2 pH5_6 Procept_6776 Procept_6778 Rifp Rox Succinate TRC TRZ Verapamil X_111895 X_121940 X_59
Rv0342 -0.519807617209836 -0.0956540231691312 -0.505337717502205 -0.150504569079472 -0.215418912158047 0.710649722362849 0.980974028959327 0.289235915169511 4.73479058482293 -0.703191849755278 -0.443044420764183 -0.228511810855012 0.718642005250845 0.111846044572218 1.18121568078811 3.73095618335401 -0.592595133018548 -0.617941773932616 0.100393076169628 0.0926774471321093 0.744074375816053 -0.286318128344193 2.49252982517008 -0.322019904579939 -0.0416183588562912 -0.183879096946679 1.08491962688473 0.0305631157603934 -0.561236167602512 -0.0448608779069467 -0.614728563575032 0.287043512562934 1.35968540043430 -0.186229263679984 -0.0810117032925899 0.0502601468904898 0.66229414087132
Rv0754 -0.927205301127026 -0.80400781255385 -0.0333338709313415 0.277591049939425 -0.216836694577674 1.82737309177242 0.38720011433132 0.0770018584750664 4.0457437181141 -0.368402266204786 0.0485709422695921 -0.346913904972445 0.352209193714242 0.338266880942169 2.00783326420584 3.3349125925728 0.090547368373666 0.157558377914842 0.0725188034838065 -0.40675766824028 0.486851507200554 -0.0925820608484944 1.11745781081129 0.000618697126407838 0.265569198935419 0.0336784563896943 0.319519139505592 0 -0.936911054133561 -0.187595734020251 -0.403334232477187 0.371713918418688 1.03377066981279 -0.0141305648194685 0.205600806611501 -0.0774756018872916 0.0271568798052244
Rv1576c -0.0499316913184684 -0.389366966210481 0.00899731267788714 0.0139395882039203 -0.789540566423333 2.17445988699186 0.704664568024404 0.119990511839776 4.48874548894636 -0.405190736055687 -0.25384669464899 -0.151115159748299 0.742572983889599 0.136602159600433 2.44659796216330 3.43449760451394 -0.250773790372137 0.08481592637074 -0.0932090685169123 -0.205115272409227 0.845880873656297 -0.193494723630521 1.61823403740489 -0.141641824164229 0.100013707432653 0.134526555404199 1.55452290610154 0.590399904707932 0.203126964375345 -0.427987396596811 -0.476335980041961 0.798280892326625 0.904576842642876 -0.279626454032013 -0.107592016981303 0.219722562895803 -0.1450153643494
Rv1577c -0.0278450183982884 -0.35943698238645 -0.109695242519070 -0.175044595361212 -0.708575864313156 1.93353897785030 0.392862709254505 0.204976484438013 4.76802821846908 -0.386854789600422 -0.436586887234439 -0.469879649216175 1.03195773786643 0.532496496686693 0.831305931412955 2.70450011830868 -0.303269851135343 -0.164879508944629 -0.313240086387112 -0.240491912326267 1.06365816119437 0.0686766887651693 1.31808636793665 -0.541172164674372 -0.123609678526306 -0.460977489443476 1.43664357413307 0.248292124279093 0.0510554402206515 0 -0.472916857092136 1.03520228383728 1.14588534728388 -0.476268029713714 -0.121009423628240 0.785084453715826 -0.0459199780340996
Rv1585c -0.1200494509315 -0.00947190188845056 -0.377019413236008 -0.454140289939473 -0.591742123928889 1.47691466243740 -0.273809649822943 0.169754639293161 4.97824015404713 -0.244162360961953 -0.229280604924228 -0.0857885257160464 0.245946481223107 0.0780071612659198 0.567375185642137 3.10640360608314 -0.0405730877983447 0 0.0891384858702805 -0.295035748886620 0.478772975339309 -0.553714225978904 1.43131000502864 -0.352211410617553 -0.0983800429391585 -0.350218210572755 0.373777107326163 -0.104027249329868 -0.339320846625878 -0.488377496698395 -0.394956877373628 0.526424875939519 1.12110454670587 -0.02343667011646 -0.199674422431065 0.0549410070374207 -0.274582823980474
Rv1586c -0.198674696161125 -0.0584492960444776 -0.0564223554185877 -0.225241294318549 -0.388670350633744 1.60457463468732 0.50044742773189 0.240861967250350 4.60523407421632 -0.341105330967507 -0.105014637243757 -0.172580186554219 0.52307235453314 -0.0548632913476547 1.06706535401984 1.9228706496187 0.29568044968511 -0.122426984643832 -0.171472830085614 -0.145862889090592 1.09464840820859 -0.216054459193339 0.933926245615975 0.00577684194675032 -0.639371232694724 -0.454286126255866 0.653383017883234 -0.0517285908592689 -0.45592717485373 -0.621263050952687 -0.164166572009938 0.97452836079551 1.73700790437954 -0.040029187210085 -0.199490481336319 -0.101083708639099 -0.14877091540944
Rv2650c 0.292049596055637 -0.113152650185617 -0.450340688754867 -0.0485330038153591 -0.622071496513716 1.43108351418173 0.162300205871253 0.677618847019967 3.40944941545592 -0.240838693551886 -0.424099858837117 -0.16599025119414 0.975209882985739 0.374194049272682 1.29115913629794 2.15080184138295 -0.199153879510118 0.183322158673742 -0.573035181705316 0.0437339670526584 1.20557377376555 0.171695621933997 1.52485307299822 -0.60081230486588 -0.0407679658284564 -0.347011045720545 1.75926665101224 0.516296035886681 -0.152422155676481 0.224004247852638 -0.713082708212152 0.512498325773366 1.36768874868858 -0.364732821923482 -0.00804833438434235 0.675816777970752 -0.109529132307313
Rv2651c -0.229204055930774 -0.272802903035779 -0.37501350542556 -0.128822525528062 -0.305230620323833 1.28813992340086 0.231157252436074 0.560395367630405 4.77371596550822 -0.296304210846734 -0.0333322856649438 -0.691321784937836 0.77271700076157 -0.192404834142698 1.10845661287462 2.32409614153923 -0.298563940516146 -0.382633448507600 -0.494547351986921 -0.120510084773562 1.41871586311672 -0.133045284017593 1.16144280378896 -0.57136650873724 -0.351508858640756 -0.105303805060215 1.12776620479186 0.243007443766294 -0.200555987095512 -0.165587877141508 0 0.306440081043552 1.16512463131559 0.227382318907893 -0.0184530476618155 -0.0395616160830809 -0.06699267596207
Rv2658c -0.078314567950801 -0.178053607134537 -0.0117041168076275 -0.438148676903428 0.200317676437347 2.81865418488466 0.162725053087473 -0.0985877129152614 4.58252886410607 -0.135526894482440 -0.297086636933519 -0.386057004626817 1.58877254254294 0.547434255442107 0.379475428969507 2.80857425564085 -0.230922635402267 -0.243991104833566 -0.627579291297471 -0.638270806232821 1.09828870626041 0.255766491956090 2.30874902893454 -0.493209028460686 -0.134523711322063 -0.729345364126143 1.92817673536389 -0.220941992502849 -0.116892361644448 -0.46877922294458 -0.895099409234712 1.34694970958980 0.952478350075641 -0.243003695923787 -0.30982034979761 0.544337815403 -0.751890301915896
Rv2659c -0.0863034720981574 -0.287039771589085 -0.370728639501691 -0.191841440327872 0.0619249000622895 2.67880842041906 1.15812060240044 -0.33960053634546 4.18148474525529 -0.408764373700964 -0.450528591689484 0 1.25411683090226 0.0534279365608111 1.59358778118899 2.98197828588256 -0.0415703982174654 -0.155784882021287 0.523033821304388 -0.585079246381791 1.49149922069652 0.129584676313343 1.96980296549966 0.256380740013179 -0.54473024045268 -0.578547904890154 1.30011698449831 -0.291059563193233 -0.654579268265582 -0.126474053201867 0.235232220079376 1.22036055460460 1.48163435829646 0.0227377264247842 -0.118522209017704 0.12920593201153 -0.560990837687279
[+] Show/hide bicluster #85 motif PSSM #1. bicluster 85 motif PSSM #1 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0.8 0 0.2 0
2 0 0.8 0 0.2
3 1 0 0 0
4 0.8 0 0 0.2
5 0 0.2 0.6 0.2
6 0.2 0.8 0 0
7 0 0 1 0
8 1 0 0 0
9 0.2 0 0 0.8
10 0 0 0.2 0.8
11 0 0.8 0 0.2
12 0 1 0 0
13 0 0 1 0
14 0 0.8 0.2 0
15 0 0 0.8 0.2
16 0.2 0.6 0 0.2
17 0.2 0 0.8 0
18 0 0.6 0 0.4
19 0.2 0 0 0.8
20 0 0.2 0 0.8
21 0 1 0 0 [+] Show/hide bicluster #85 motif PSSM #2. bicluster 85 motif PSSM #2 Mycobacterium tuberculosis H37Rv 20x4
POSITION A C G T
1 0.142857 0 0.857143 0
2 0 0 0.142857 0.857143
3 0 1 0 0
4 0 0 0.714286 0.285714
5 0.428571 0.571429 0 0
6 0.142857 0.285714 0.428571 0.142857
7 0 0 1 0
8 0 0.571429 0 0.428571
9 0 0.285714 0.714286 0
10 0 0 1 0
11 0 0.571429 0.428571 0
12 0 0.285714 0.714286 0
13 0 0.571429 0 0.428571
14 0.142857 0 0.571429 0.285714
15 0 0 1 0
16 0 0.428571 0.142857 0.428571
17 0 0.142857 0.285714 0.571429
18 0.428571 0 0.571429 0
19 0 0 0.857143 0.142857
20 0.714286 0.285714 0 0 |