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[+] Show/hide bicluster #84 rows and columns.
bicluster 84
Mycobacterium tuberculosis H37Rv
25x35
[+] Show/hide bicluster #84 rows (genes).
bicluster 84 genes
Mycobacterium tuberculosis H37Rv
25
[+] Show/hide bicluster #84 rows (short gene names).
bicluster 84 short names
Mycobacterium tuberculosis H37Rv
25
short_name
[+] Show/hide bicluster #84 rows (long gene names).
bicluster 84 long names
Mycobacterium tuberculosis H37Rv
25
long_name
[+] Show/hide bicluster #84 rows (NCBI RefSeq gene IDs).
bicluster 84 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
50
[+] Show/hide bicluster #84 gene upstream sequences.
bicluster 84 upstream sequences
Mycobacterium tuberculosis H37Rv
25
upstream
[+] Show/hide bicluster #84 columns (arrays; conditions).
bicluster 84 arrays
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #84 ratios.
bicluster 84 ratios
Mycobacterium tuberculosis H37Rv
25x35
GENES Amikacin Cap CCCP Cephalexin Cerulenin Clotrimazole DCCD Deferoxamine DIPED Dipyridyl DNP DTT EMB GSNO_KCN GSNO_menadione Mtm NRP_1 PA_1 PA_21 Palmitate pH4_8 Procept_6776 Rif Rifp Rox Succinate Tet TRC TRZ UV Valinomycin X_109 X_111891 X_124196 X_59
Rv0251c 1.20541139400657 -0.511954161221305 0.907115413167596 0.190927340318445 0.353087922472344 -0.212030475709401 3.29734015211606 -0.338194305570704 -0.161091223045751 0.177068727808942 1.82446029981783 -0.263762994023092 0.850142386358708 -0.0387324201286208 2.40456058243534 -0.321961489038272 0.666412150113503 -0.430598807949165 -0.160880331118588 -0.983169604684849 0.387165409297317 0.584984360934094 -0.647613419656949 -0.568930115209713 -0.608454387756388 -1.19469711766600 -0.678767939871384 1.72444560426356 2.34918077058168 -0.31962452191031 1.94847442596810 -0.0710776413281693 -0.307522097111573 -0.291133928990484 0.0748462863880838
Rv0384c 0.971082921530932 -0.603732715598571 1.15887681161578 0 0.301434977617936 -0.129095838999453 2.22219730108794 -0.161525785374087 0.154476434304041 -0.00240227423785977 1.07934183398217 0.139624988845187 0.176977681035142 0.25954631846123 2.88198586400249 0.0818809645833497 0.128412649136435 -0.476639694751303 -0.378497277162585 -0.404559963162457 0.72665772539752 0.275799834866318 -0.431682022201578 -0.212471344235872 -0.0380453024027708 -0.355211312247173 -0.512637801056548 1.07504601231894 0.503358842814943 0.107349481883466 2.54864932618620 -0.204600838713443 -0.272199989458431 -0.349220054815596 -0.178879220907655
Rv0441c 0.312869382707066 0.227031839861304 2.63269566386189 -0.255197958487845 -0.196001097745060 -0.605521918858329 2.2575376141293 -0.235479443415399 -0.49071164250095 -0.168610565666823 2.32427486615059 1.24994960942074 -0.198065062630649 0.249902958129546 0.365664202272108 -0.86992011466396 0.671049500632388 -0.769829453178789 -0.592702270378957 -0.805151337170805 -0.398572871387064 0.751513477426348 -2.73494502114183 -0.129035812399984 0.474677636905272 -0.797082607222216 0.0480889958411439 1.33657023964935 1.36840136455657 -0.202591138290102 1.49222014704852 -0.596631912311309 -0.753975348306922 -0.0758740831054322 -0.417366110347559
Rv0726c -0.208436595461269 1.02368358006468 1.02447278113456 -0.239983144704079 0.169564446738989 -0.139271012928986 2.36417785563596 -0.371039384630227 -0.100061244504278 0.171520128577327 2.84516019239556 1.85473658540206 -0.0247067426615282 1.28166595491795 0.899255729101386 0.426008937474687 0.75295192598496 0.137944634490408 -0.0320310742946125 -0.733242096719472 1.30204375746244 -0.213735090336707 -0.284044393367518 -0.518096071735039 1.26067244191269 -0.97250592431738 0.915903435003863 0.402077277967594 -0.231774700772333 -0.0263726589423474 1.47577709762277 -0.356993788359413 -0.0572285909213381 0 -0.450626203825067
Rv1627c -0.935859009555861 -0.638354244209476 0.461158290364565 -0.112059260806051 -0.121103536738382 0.604999617444904 3.28189616256906 -0.561239718815447 -0.796933407097982 0.102906390933601 0.949085626892005 1.31030582465895 -0.64420259851785 1.71731303227075 1.59182853522220 -0.988313014550423 -0.291852948278921 -0.142499080265787 -0.0545010368534863 -0.0132208892239188 -1.03275022683382 1.25649631753895 -0.461459072183505 -0.182673363140998 -0.995361038073793 0.35950399647354 -1.24087038061142 -0.0328324713636569 0.460035663964650 -1.28496765033331 3.25535168430851 -0.649034729201606 -0.341522624476481 -0.47667804233813 0.46522513230345
Rv1628c 0.518096485417996 1.15214702859444 -0.61211292363989 0.049226318976768 0 0.345612101662150 1.30225529425105 -0.119569042737372 -1.51734730732752 0.315378866905574 0.79651477592644 -0.153006287478394 -1.05014109075614 1.25972939256416 1.67846526127401 -0.614684093745640 0.0458961387793829 -0.413232765236678 -0.220093190382944 -0.121165573895875 -0.563907246115773 0.903621290107697 -1.92934632901778 -0.399037674565905 1.29499002560190 0.128220283143214 2.46060079191160 -0.604139972965583 0.748475084107807 -1.58445757849019 2.89182294098391 -0.843610374186928 -0.171276105116184 -0.389404048273759 -0.538028965036835
Rv2111c 0.875645782336628 0.205086087450371 1.74019915325972 -0.52605702669748 0.0733569137475825 -0.279155069315238 2.00242507928176 -0.445411818244157 -1.21093639576390 -0.399117223844252 1.57307301983413 1.15132271972526 -0.429154579033473 0.0219666190457656 1.37630724445216 -0.65478172831683 0.536110076174225 -0.378793150257001 -0.64416519579028 -0.321023292878121 -0.205646159625690 0.357039400068788 -2.52877786040375 -1.76701945065004 0.0394044554188291 -0.433515037025695 0.79153052928497 -0.0172661561295760 1.85610509321597 -1.29070746951813 1.39860114019721 -1.03334309582463 -0.42369590374088 0.60136635265665 -1.04089101339024
Rv2526 0.46057269412785 0.384702586161796 2.09488297536285 0.356852106243079 -0.271881858078692 -0.630893536940876 2.8730271299673 -0.391116311737174 0.00279857586095703 -0.387266617863487 1.40186039565635 -0.0775282471010979 -0.156243890750889 0.325138968536529 0.624237310741976 -0.229100745184333 0.785302035169763 0.244626765361872 0.348572568651303 -0.532264523400066 -0.459410076349265 0.860163045640532 0 -0.401747515574236 0.174223960842972 -0.552664512383858 0.739673019155833 1.29351811128307 1.59314546084434 -0.442667944917418 2.01465155830259 -0.221642403526703 -0.320674580228649 -0.325148376009846 -0.0884644001718632
Rv2527 -0.531584579460193 -0.301963617137982 2.66189332394489 0.213254003005042 -0.189142561844497 -0.180568620919448 3.55032111747683 -0.879886450435203 0 -0.378055758025097 2.35635064043025 0.126035513728580 -0.103595481798587 0.279985355929904 0.652239619099034 -0.906851025805181 0.247412993969831 0.112436292445945 0.737825473079071 -0.215880767033108 -0.905682811354478 0.228757434967358 -1.23986722951437 -0.879178221759614 -0.705334142244473 0.00374499522114928 -0.465138700530278 2.16067069193918 1.18826441750447 -0.6122915495771 1.82021469229567 -0.373396642176411 -0.140417564731317 -0.153796214536087 -0.102351751280775
Rv2618 0.123824847128840 0.576537513654519 0.668475288071393 -0.28768525374577 -0.494933951291425 -0.114149033886156 1.82577027667188 -0.225004728508491 -0.921181493318694 -0.315552821509464 2.77091957344355 0.593524714779696 0 0.748582013932263 1.33127988619292 -0.263287021021599 0.715364478888478 0.00331130564839785 0.213550094674794 -1.03753832928525 0.137615550100288 0.114000697688065 0.485162730830301 0.372587487056243 0.699378198243764 -0.893223645941649 0.143586709801719 0.990153114530565 0.585814730661734 -0.117443707673576 0.965989081616203 -0.517221266852708 -0.196201256886488 -0.126747096943070 -0.264924398138096
Rv2641 0.715568405142618 0.348026801012400 1.57047727610974 -0.0801540259188425 -0.310852178826338 0.0888835561729754 1.40945725745902 -0.230866363420281 -0.63283807356869 1.42498367555930 0.824796989284394 0.56413573463991 -0.366757988474263 0.0917600380257207 1.584877587099 -0.651470283771126 0.118029559526441 -0.476218936554116 -0.640150263887485 -0.293108391308549 0.823392654987108 -0.463488870437557 -1.09225166766581 -0.366798820825302 0.514711828547207 -0.670039302190582 0.837917505146332 0.694473398028315 0.447287382431522 -0.245563663107457 1.66702336297512 -0.462147585124862 -0.354673746553878 -0.316546242689292 -0.398120321712896
Rv2710 0.966540445044121 -1.37791204339416 0.873541421546906 -0.271438973031624 -0.379005226689704 -0.595211420735015 2.25761855701411 -1.10845565894817 -0.650339749510195 -0.854301880502173 1.11680093774315 0.336623795833305 0.237321272101623 0.623995527584822 1.10055199548063 -0.759355403668416 0.289710594002345 -0.606296910880056 -0.491963231684602 -1.55465929487885 0.373114480025196 0.693099510719515 -1.97866549988732 -2.04109799809737 -0.184536541949299 -1.49820162290514 -0.0660199885749375 0.856902116133214 1.96416259828994 -0.902248842000495 1.15522376930001 0.0248269946645496 -0.952809040509122 -0.549229502482755 -0.0053249159856567
Rv2711 0.915435488936895 -0.0692559225405643 0.585874767484557 -0.540359660038724 -0.23817980135266 0.0740488847285756 2.99833927218414 -0.888742113563039 -0.682083273269732 -0.564355804816091 1.25692863084457 0.708024567378522 -0.307587275700352 1.56997197676565 1.63108474532037 -1.08477399389133 0.643333999119703 -0.0184408020852888 -0.139371017329206 -1.15761929325439 0.0634564849532541 0.812234302815456 -2.04450460232996 -0.897891118076881 0.684535152194187 -1.35038256090218 0.263359610645328 -0.00327166552264913 2.04585585779738 -0.643200838224608 1.95690718886355 -0.306567126991495 -0.686086678327692 -0.275232084488509 0.194850967356973
Rv2920c 0.981187716237165 1.12272514730665 0.0932637164951107 -0.604002591936458 -1.26069922726863 0.709841756547667 2.78232019105791 -0.518252065765853 -0.433210122506453 0.289278945441506 1.65799283601778 0.118120680979256 -0.997013208002097 1.01367822571336 0.560759340657347 -0.872485237915572 1.26274455918754 -0.177757404101563 0.0886568239771274 -0.327176431211746 -0.132085799899907 0.89360895241687 -0.622736724977533 -1.07776204184369 1.47456829041216 -0.314910272986964 0.499083418184861 0.368460416297451 0.789327796953898 -0.921525054620439 2.06948155104792 -1.03817785249861 -0.304843216499843 -0.0790222538732048 -0.284452596479678
Rv3052c 0.477784774887416 0.999021856016235 0.942639521768251 -0.160805135132121 -0.00128146765155169 -0.567841578116287 2.05783591753128 -0.105957622897572 -0.62909210898754 -0.654317748104407 1.5056374318392 -0.49659335931658 -0.411044399139909 -0.155640555329897 2.44768641010436 0.282980882886924 1.234188178448 0.000684129495415592 -0.368449030062463 -0.63859426333668 0.467710417489653 0.322215159604944 -2.96739350406485 -2.19580906948757 1.20935013781960 -0.898366351655272 0.0839769213778141 0.413941407239588 0.829591842005308 0.583007055671063 0.281627067561057 -0.761957349265422 -0.223967724414808 -0.559650397234882 0.0293239225271623
Rv3053c 1.86558469430972 0.77591371326604 1.67417644438294 -0.095505374674209 -0.116413843800832 -0.511412187633889 2.29777593870348 -0.598375219141785 -1.03854223786527 -0.782077231329291 1.56522725242696 -0.144539802036674 -0.313889499586677 -0.274919737208767 2.22676629679442 -0.211375209457220 0.953941453655774 -0.415920969077137 -0.729811880535502 -0.480915168030915 0.748506944183465 0.995667902257865 -1.91669218461166 -1.25182316554688 1.09298821357305 -0.912790551067064 1.90649382607895 0.863348261089282 0.704874076096208 0.109674030673802 -0.0201359851935650 -0.277263951196821 -0.719772516000707 -0.746593465339859 0.195557888343027
Rv3064c -0.349357599330794 -0.179631727050319 1.19876830024018 0.0611130574721229 -0.280052024845706 -0.84356999696553 1.81868033330400 -0.338900849756677 -0.175250619759835 -0.192699323966866 1.32905854803092 -0.127010795060669 -0.203107322359510 0.354178088714978 2.89051863790194 -0.371030866137988 1.20433220450787 -0.656197770959903 -0.736331093756936 -0.482232021859826 0.0809962254017561 0.807834262317008 -0.0926519980462119 -0.431160580776536 -0.146261212284837 -0.236710343403234 -0.387809567866498 0.655698042667015 1.74819619374829 -0.365440541435677 1.80396392893170 -0.0308677549304941 -0.438551652842064 -0.343518097673874 0.108767889505704
Rv3070 -0.177359203342088 0.328951306913766 1.26812090963354 -0.0522428995542266 -0.335823741582216 -0.39672647083946 2.94074550625766 0.332890121814642 -0.156578161045262 -0.328215059705828 2.20445991519022 0 0.276971354582061 -0.157792708097488 2.09013099553106 -0.122696750408438 0.491793893186681 -0.444687511316134 -0.560035439499767 0.0551736955899044 -0.385136927713033 0.210025032285152 0.707382928908587 -0.366935209689277 1.72052960401166 0.230889816221743 0.137123903147218 0.0571982633891656 2.23467980903014 0.179608519485698 1.73948175985894 -0.0115938408681790 -0.206648757109826 -0.343102437134024 -0.111158519614723
Rv3173c -0.155704015748195 -0.133911789717573 0.469727731252888 0.1457312048469 -0.48794052281542 0 2.57199856067946 -0.164673913804606 0.0846199406482361 -0.476867728451489 2.15165645714846 -0.0582677169010887 -0.71627086170841 1.25597479823597 2.15240781349639 0.069636971673223 -0.194430790786944 0.0528773909682092 0.0284658618853452 -0.494056005853558 0.728080492712444 2.09289192293100 -0.731860121725878 -0.0416749981231357 -0.154999358714977 -0.243456874258654 0.89778906725952 1.24160438421431 1.25478648115827 0.0170191459250213 2.03500989657836 -0.221212941894333 -0.147509519033526 -0.0782458936275397 -0.124332741621057
Rv3223c 0.261098525034581 1.58907642049941 0.595333153631289 -0.517066675075539 0 -0.126252831592072 1.05349274404148 -0.155490621164394 -0.351387936666025 -0.486337705965831 0.224295396473967 0.384914385927441 -0.256049311277396 0.0730855149200936 2.28818587028839 0.463057163956811 -0.161394543993830 -0.744244638583065 -0.627331978896731 -0.163533598529977 0.836142565039925 -0.319222145754959 -0.9820440584056 -0.68070243407993 1.75163490294052 -0.42208321267127 2.0846430057305 1.05660350255717 -0.0345669670772764 0.598377529601632 0.104797572381047 -0.358828423526217 -0.284798691260449 -0.449693430840982 -0.778124131454715
Rv3504 0.0531855129468775 0.939119696526335 0.848415956643544 -0.399248105320625 -0.122681259365083 -0.235213531953419 3.11051363825664 -0.186195622334459 -0.602928113695379 -0.57144022955803 0.658696762991445 0.797724865490245 -0.511671471893527 1.07204873900449 0.447807815268105 -0.341175815046720 0.765642179539225 -0.48245417495393 -0.236454046655371 0.110031328383641 0.186419911441558 1.60075197345755 -1.39013325419032 -0.326724805848888 1.85112870354849 -0.0573406456944269 1.69720139491566 0.383061359423283 0.872987390478839 -0.294914789463107 2.88444025474633 -0.329621957177424 -0.528463476851092 -0.545952769520743 -0.268811430617079
Rv3526 1.17998014317525 0.490461477090866 0.977638562641275 -0.442709965438193 -0.461341319538564 -0.00637789823095839 1.8006850302438 -0.300900368808469 -0.561311339789732 0.331345997652868 1.2698315016609 0.657896700334876 -0.335721421722911 0.645226342599426 1.40621834205818 -0.831822706860261 -0.419762022087011 -0.541893588473876 -0.130114712668660 0.331496268576199 0.0279426151198218 0.203401389178443 -1.55560538264659 -0.866859917126164 1.72567240043965 -0.0710526817856445 0.891547590189919 0.0233472464541986 2.76866076934100 -1.06502110395335 2.02684936273679 -0.505126197095226 -0.58446697033119 -0.763005757888417 -0.355364393632147
Rv3527 1.48296555774255 0.569865028799188 0.476549721373829 -0.699713242696495 -0.171342052357319 0.271322767615221 1.46810290202184 -0.471475156944534 -0.2067833059175 -0.209124892937677 0.785716247102088 0.349453806303241 -0.387491015620831 0.942346804502137 1.94800478280629 -0.524379031117129 -0.00599906433365255 0.460692876962877 0 -0.576018263440507 -0.473576101334926 0.696232547974271 -1.21319595676625 -0.226020669366274 2.12864922025399 -0.798866053166907 1.18209225491434 0.711190922524504 1.14679238768298 -0.0554833863741072 1.91995422526659 -0.431447029970857 -0.410479255205958 -0.582355568702219 0.041492561139529
Rv3570c -0.141791719233319 1.32684632025327 0.494493349394784 -0.550493612637256 0.223908865281015 0.109236026052271 1.83338771013802 -0.407207962374839 -0.677674518443146 0.279881945974074 0.806213661645342 0.471723838227759 -0.65909695302966 1.78607432021353 0.699944015786798 -0.556435226726935 -0.518045805383041 0.177927329908624 -0.0760692107794522 0.280767384282698 -0.496061459890406 0.613837175126745 -1.75887977769779 -0.345529836732866 1.58633505927406 0.117070737958925 0.265709722572914 0.229591987661045 0.284003916284123 -0.290807282057940 2.82526651185802 -0.928444966625161 -0.315600157573145 -0.353890986158913 -0.330526155124512
Rv3857c 0.627175259498872 -0.0978306710900716 1.17810688115597 -0.0485704972786317 -0.496090167832801 -0.0326463093126749 2.40622952186916 -0.610394163373486 -0.644706469620674 -1.00653894098676 1.022223599764 0.479164857995269 -0.539771953097971 1.29954449527495 0.370248182937389 -0.723388102969196 0.749017861775287 -0.758022247125375 -0.681135666018918 -0.297087441782222 0.177748412457587 2.93144496885808 -1.18239931173380 0.0276010791132697 0.342719797328249 -0.453611750902799 0.552022624791663 0.534511158494871 0 -0.550483232440929 1.25004319882000 -0.165614933551293 -0.744630887020807 -0.507937189338311 -0.00984839693891856
[+] Show/hide bicluster #84 motif PSSM #1. bicluster 84 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0.125 0.5625 0.3125 0
2 0.375 0.5 0 0.125
3 0.4375 0.0625 0.25 0.25
4 0.4375 0.125 0.3125 0.125
5 0.625 0.125 0.125 0.125
6 0 0.3125 0.3125 0.375
7 0.0625 0.125 0 0.8125
8 0.1875 0.5 0.125 0.1875
9 0 0.375 0.4375 0.1875
10 0.625 0 0.1875 0.1875
11 0.6875 0.0625 0.125 0.125
12 0 1 0 0
13 0.8125 0 0 0.1875
14 0.0625 0.3125 0.375 0.25
15 0.25 0.0625 0.625 0.0625
16 0.1875 0.25 0 0.5625
17 0.375 0.125 0.0625 0.4375
18 0.4375 0.25 0 0.3125
19 0.25 0.75 0 0
20 0.8125 0.1875 0 0
21 0.25 0.1875 0.5625 0
22 0.5 0 0.1875 0.3125
23 0.125 0 0.1875 0.6875
24 0.1875 0.1875 0 0.625 [+] Show/hide bicluster #84 motif PSSM #2. bicluster 84 motif PSSM #2 Mycobacterium tuberculosis H37Rv 10x4
POSITION A C G T
1 0 0.142857 0 0.857143
2 0 0.571429 0 0.428571
3 0 0 0.142857 0.857143
4 0.142857 0 0 0.857143
5 0 0 0.571429 0.428571
6 0.571429 0.285714 0.142857 0
7 0 0 0 1
8 0.428571 0.571429 0 0
9 0 0 0 1
10 1 0 0 0 |