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[+] Show/hide bicluster #83 rows and columns.
bicluster 83
Mycobacterium tuberculosis H37Rv
14x34
[+] Show/hide bicluster #83 rows (genes).
bicluster 83 genes
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #83 rows (short gene names).
bicluster 83 short names
Mycobacterium tuberculosis H37Rv
14
short_name
[+] Show/hide bicluster #83 rows (long gene names).
bicluster 83 long names
Mycobacterium tuberculosis H37Rv
14
long_name
[+] Show/hide bicluster #83 rows (NCBI RefSeq gene IDs).
bicluster 83 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #83 gene upstream sequences.
bicluster 83 upstream sequences
Mycobacterium tuberculosis H37Rv
13
upstream
[+] Show/hide bicluster #83 columns (arrays; conditions).
bicluster 83 arrays
Mycobacterium tuberculosis H37Rv
34
[+] Show/hide bicluster #83 ratios.
bicluster 83 ratios
Mycobacterium tuberculosis H37Rv
14x34
GENES BZA CCCP Cephalexin Clotrimazole DCCD Dipyridyl DNP DTNB DTT Econazole EMB Eta H2O2 INH KCN mercaptoethanol Nam Nigericin Novobiocin NRP_1 PA_1 PA824 Palmitate Procept_6776 Procept_6778 Rif Rifp Succinate TRC Valinomycin Verapamil X_124196 X_241 X_59
ORFD0354 0.714196443207372 -1.61588274714503 0.224757572813433 0.140497993203204 -3.80323882569901 0.0451121470623546 -2.64555681140296 0.268828049285049 -1.22146620117478 0.129813117426686 0.0833131128335534 0.412021109703897 -0.887605052158333 0.737535289673192 -2.46253978207548 0.145618630746613 0.488621207968878 0.404649917100806 -1.78340987579224 -0.873713994415275 -0.0921158012650830 -1.67420742136072 0.921941015038117 -2.17642123262675 -0.515373974576945 -1.14472209864229 -0.589651725539502 0.63757187281346 -1.66736695589391 -2.42157965672676 0.313091622315999 -0.0200010274120359 -0.450844332010994 0.103926206757873
Rv0073 -0.124518026279035 -3.05888864840545 0.262150428488697 0.461554696859532 -3.72547791235202 0.122353630955990 -2.47893511151577 0.497177269345555 -1.54676399561425 0.527260118173239 -0.478702254332174 0.116382325033028 0.0739761022403566 0.00799614033203663 -2.36085050637343 0.316009319250433 0.0625546418886761 0.273372918950609 -1.75926430487921 -1.28620824269659 0.560698275312892 -2.05764762357296 0.247658509036583 -1.87194625628068 -0.336496580103775 -1.43398527028935 0.0338755150586446 0.552206266146997 -1.94683463463492 -3.07986107096119 0.554672407698011 0.754122966619581 -0.85219258655918 0.298092152746125
Rv0759c -0.0992005918306346 -1.03859896514531 0.477541292737395 0.84010437250575 -2.05384764027768 -0.398064182080812 -1.39639915089807 0.834427308465326 -1.05565579997619 0.625747371034194 0.330009023852114 0.74550819003511 -0.482083753715997 -0.19872600248521 -1.38593613350225 1.04547787022661 -0.147546709174166 1.54521970933533 -1.20528666870717 -5.98798985226364e-05 0.680664646320101 -1.29974072227985 1.44922070903498 -1.29880978101378 -0.308518242977084 -1.83815591561117 -0.292676626195354 1.49376578694910 -1.06507599932838 -2.33321274265838 0.600067189720393 -0.0576439936329246 -0.781720360139232 -0.462132577477085
Rv1018c -0.228808597124940 -2.10547585158975 0.119372371495767 0.499493743237438 -1.96431199460136 -0.0515541388574384 -2.53066945161713 0.42466753677583 -1.42048630204801 0.529212412542128 -0.0207009332078103 0.224617494923153 0.125653696789776 -0.365442854157232 -1.91406517579699 0 -0.0140795695151418 0.924228928421355 -1.11364436419912 -1.43976112020140 0.00568746733041672 -2.0103159450452 0.140724190679749 -2.27190962295229 -1.37625113725637 -1.07021549963084 -0.116783907076935 0.747024448859832 -1.25923610426748 -3.44893219602525 0.400499628378505 0.0790695798888634 -0.64193889343998 0.200006146847144
Rv1078 -0.845248377875413 -2.10117449854657 0.561563701513964 0.416360626203842 -2.65630431344436 0.191013154577011 -2.33388438757211 0.768665821760456 -0.518739705157968 0.417998612070316 0.194104392603089 0.438060187011641 -0.63961300817033 0.733188470084949 -1.73925960695313 0.762202574974218 -0.542015717854904 0.545776984660004 -1.67862470993676 -0.452325089736324 0.89317461125745 -2.26315999128590 0.672800941316864 -2.12325499972158 -0.281029567964612 -1.46335430315790 -1.09856234550412 1.12089113247086 -2.35577468882398 -2.73893620542125 0.100302027807446 0.304042637357328 -0.60863045291803 0.272074147510793
Rv1242 -0.38060726282952 -3.13259553424155 0.110125044396327 0.233108882462224 -3.26431200584881 0.377904569954851 -2.98508454105619 0.397884952333327 -2.05237267164118 0.410152744637159 0.0491640883538561 0.2095419078304 0.00191514725828378 0.0968658950642053 -2.44072878076889 0.640781227682181 -0.0798988306299578 1.47534144224958 -2.58352373709015 -0.505078592467928 0.60310961976865 -1.51761013804796 0.204453628955836 -1.56405607039022 -0.247669359428826 -0.513305535252726 0.268203539286537 0.913019726317424 -0.897302541366802 -1.33111527925275 0.341170113795471 0.214984800090104 -0.776512352472277 -0.00688371797609635
Rv2046 -0.565332451003481 -1.96213454185156 -0.047025334699295 0.0218867447681532 -2.76115783710938 -0.151992522812649 -2.31025195049032 0.274118695152181 -1.21093238286688 0.399990568210559 0.219386297068892 0.126661839599235 -0.433715301801935 0.175388494670428 -2.54485319655005 0.446081423698139 -0.474743331950534 1.3640684435233 -0.626470466989642 0.220281566374846 -0.410711442782593 -2.95204400023437 0.208115537532566 -2.49675666417579 -0.73047372625817 -0.0913385090890956 -0.484954800448773 -0.0667998113080921 -0.990528206153207 -2.47027896805271 0.727142331255622 -0.0837635877844821 -0.0173126680392158 0.223603073632069
Rv2080 -0.053965417908067 -2.15465008800018 0.299680210033919 0.630110595548451 -3.63990394952432 -0.203347099292806 -1.82535043655568 0.715478701217788 -0.622706586154692 0.714462440360747 0.140305703481284 0.157182435392601 -0.278877751416924 -0.236442695994254 -3.31764250740209 0.80564894748162 -0.0371597154067001 0.887571579417924 -1.93475475151416 -0.369079596478193 0.74925585291354 -1.88604989622924 0.397514558709389 -1.71678869383463 -0.926554862301332 -1.96216715408209 -0.868802960646049 0.519402303691607 -0.99922465372345 -2.27178756025630 -0.155424719946589 0.150105473231602 -0.282517225602278 0.0162465626466436
Rv2289 0.626717303658553 -1.90090482334768 0.335458401227556 0.435539477140869 -3.17066502447743 0.12285499664713 -2.01407806766623 0.561245365145773 -1.36226626613387 0.575715937332613 -0.060798635162573 0.522866638527413 -0.423624832063204 0.394163502555386 -2.27421671529045 0.541189955819366 0.483250831597006 0.88554041987918 -0.625911423935414 -0.336050960884523 0.443403330555081 -1.55382727237105 0.99519913661083 -1.56674805619619 -0.104426497972179 -0.785100644609741 -0.155832074564718 1.0159082668369 -0.615274250998075 -3.34837478593825 0.316959738292129 0.514472821275988 -1.01963856054302 -0.260033080602235
Rv2427c -0.596296140508108 -2.01998999823447 -0.179727112165412 0.840493342299137 -4.27241668843336 -0.0663934322397627 -2.05919271484842 0.121246582950214 -0.490420289204401 1.06628367434188 0.361429076602563 0.836073565569762 -0.733106509285528 0.481702752752483 -2.3915143426395 0.289978795794408 -0.800552517894692 0.71978704132598 -1.99218658484334 -1.33830239454145 0.492824094989313 -1.60610186646587 -0.128598748485579 -1.33982011840356 -0.478756746918317 -1.20534234805109 -0.0462082259213529 -0.0498624948992059 -1.13184118781263 -2.39161966000213 0.191245661251705 0.461977688957149 0.0437514815578742 -0.214634466647071
Rv2582 0 -1.80386940206175 0.365203126184022 0.59528497600907 -3.92732580957175 -0.508788094083845 -2.35419720779899 0.866193432494648 -0.668736500645194 0.404432903345815 0.32755992085768 -0.442251212347206 -0.304508064700962 -0.321867838526923 -2.87180275729619 0.67663176132182 -0.0808733776074322 0.925073009663766 -1.07824050290408 0.350738491674727 0.376071455893092 -2.39631917248936 0.485986504373184 -1.88416087578071 -0.529370422938733 -0.393035576014259 -0.45292164674339 1.02845157158916 -1.31167590348096 -1.43223417103080 0.572725513933319 -0.0754714947260397 -0.399441384046314 -0.0225070475842692
Rv3438 -0.643993758720002 -2.0303927556936 0.178909451782140 0.0204613501338673 -3.03755401963827 0.641811132092994 -2.8336696339042 0.465038774958177 -1.17329787781456 0.473867023842806 0.58001106272818 0.560563760378051 -0.788274260617402 0.254275364060614 -2.96408416597574 0.156458240955955 -0.178114026521421 0.431385442726574 -0.100811590071949 -0.566471124081504 0.0562806021649574 -1.92796740664201 0.663360209424436 -2.54885208446329 -0.551041516893776 -0.975239075539687 -0.8019963794023 1.02339729426939 -1.33709781078445 -1.59027352798391 0.56546892671378 0.311198799358701 -0.522179438746249 -0.0230667785802701
Rv3477 -0.0252618594323206 -1.58473362355748 0.351930447555953 0.311905275671973 -3.57569742843265 0.244573401074528 -2.77883839986244 0.236516564720724 -1.31112490233899 0.201190322289636 -0.088579550737516 0.217565536953582 -1.14983372112531 0.576536765889369 -1.90975733504517 0.264379353413214 0.147052175587725 0.22114975021434 -1.72533004896814 -0.884902321990067 -0.0826299516609755 -0.761414197851575 1.05396877765236 -1.80565899023817 -0.113088824401228 -1.66789636171873 -1.01805475301703 0.928203053172467 -1.95405216958084 -2.36952071584971 0.351367360233940 0.102373617257217 -0.688286790211674 0.313760788574136
Rv3478 -0.854129653212623 -2.10602151200047 0.399293288932394 0.165446384590013 -3.6469785100455 0.480280734058819 -2.91503256173649 0.244374736722311 -1.33838678530331 0.0283711461790133 0.291709068714876 0.376789539417685 -1.01367669561344 0.662493039903783 -2.06544450789386 0.419901289469365 -0.62969749653783 0.116885349257468 -1.62888190327570 0.513319696501473 0.176874306706521 -1.22466270437636 0.90652679815362 -1.15554220302561 -0.153196251036176 -1.5838161019668 -1.28857806630388 0.755052716945398 -1.96154977141914 -2.19707498479753 0.211838623504745 0.306178784693847 -0.371503541236628 0.471021657614857
[+] Show/hide bicluster #83 motif PSSM #1. bicluster 83 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0 0.909091 0 0.090909
2 0.090909 0.181818 0.727273 0
3 0.272727 0 0.181818 0.545455
4 0.090909 0.454545 0 0.454545
5 0 0.727273 0.272727 0
6 0.181818 0 0.181818 0.636364
7 0 0.090909 0 0.909091
8 0 0 1 0
9 0.909091 0 0 0.090909
10 0.272727 0.727273 0 0
11 0 0 1 0 [+] Show/hide bicluster #83 motif PSSM #2. bicluster 83 motif PSSM #2 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 0.2 0.8 0 0
2 0 0 0 1
3 0 0 1 0
4 1 0 0 0
5 0.2 0.2 0 0.6
6 0 0.8 0 0.2
7 0.2 0 0 0.8
8 0.2 0 0.4 0.4
9 0 0.4 0.6 0
10 0 0 0.8 0.2
11 0 0.2 0.2 0.6
12 0 0 0.4 0.6
13 0.2 0.6 0.2 0
14 0.8 0.2 0 0
15 0.2 0 0.8 0
16 0.8 0.2 0 0
17 0 0 0 1
18 0.6 0.4 0 0
19 0.4 0 0.6 0 |