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[+] Show/hide bicluster #82 rows and columns.
bicluster 82
Mycobacterium tuberculosis H37Rv
26x38
[+] Show/hide bicluster #82 rows (genes).
bicluster 82 genes
Mycobacterium tuberculosis H37Rv
26
[+] Show/hide bicluster #82 rows (short gene names).
bicluster 82 short names
Mycobacterium tuberculosis H37Rv
26
short_name
[+] Show/hide bicluster #82 rows (long gene names).
bicluster 82 long names
Mycobacterium tuberculosis H37Rv
26
long_name
[+] Show/hide bicluster #82 rows (NCBI RefSeq gene IDs).
bicluster 82 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
30
[+] Show/hide bicluster #82 gene upstream sequences.
bicluster 82 upstream sequences
Mycobacterium tuberculosis H37Rv
24
upstream
[+] Show/hide bicluster #82 columns (arrays; conditions).
bicluster 82 arrays
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #82 ratios.
bicluster 82 ratios
Mycobacterium tuberculosis H37Rv
26x38
GENES Amikacin Antimycin BZA Cap CCCP Cerulenin Clotrimazole DCCD Dipyridyl DNP DTNB DTT Econazole GSNO GSNO_CFZ GSNO_KCN KCN mercaptoethanol methoxatin Mtm Nam PA_1 PA_21 PA824 pH4_8 pH5_6 Procept_6776 PZA Rif Rox starvation Succinate Tet TLM Valinomycin Verapamil X_124196 X5CL_PZA
ORF02159 1.71635141268821 -0.26445635258179 0.86762505870409 1.40787755152895 2.26739841893423 -0.0671112498411097 -0.351059183589339 3.17753268457166 -0.167904978123714 1.96549290681593 -0.282293107262053 0.488161695901389 -0.316305770676116 -0.157046622835126 0.393739203897912 0.563274597707755 1.26707446410986 0.224955108380255 0.0861191890977465 -0.200910758533836 0.142735618004826 -0.0496222832884962 0.118122801420318 0.618186695144061 -0.205255755400432 -0.397317393137485 1.24600220258394 0.849834010001932 -0.551045815235651 1.49553865365326 -0.284454006171363 -0.595061363176435 2.30709428252667 0 2.84841046114421 -0.221385874097651 -0.0500511441796867 0.0547931197579917
ORF03593 1.24762988801344 -1.42934241429404 -0.0752848008375878 1.69496565364362 1.52239868612389 0.133819686199884 -0.652706265703629 1.26403900916745 0.0547012460898012 0.258028210892708 -0.423111531230655 1.64959551972937 -0.879356367842934 -0.99720678212418 0.244872505702381 0.536345798762821 1.97938373023821 -0.793299277381073 -0.688968053703048 -0.526044290539519 0.245802586905969 -0.901131402794937 -0.967592415335964 3.88222136839766 0.0702807559008292 -0.85635366394533 1.52411992279886 0.39019856295331 -0.0842542111254847 1.24862225531113 0.903484901642147 -0.902023592126585 2.31191709035862 -0.0798848983331648 2.68868739775926 -0.233713050100513 -0.547891935500469 -0.101544162460082
Rv0279c 0.403077749949877 -0.386225890309008 0.0362456826937846 -0.0385335825933567 1.44253094702826 -0.219479468400246 -0.325814224384070 3.14056022223983 -0.199840445415111 1.63131564538394 0.197049656655851 0.9488945225131 -0.52911894307025 0.270375663750066 0.655173228628221 0.402756631732913 1.91663092661664 0.254194484458918 0.874386884838582 -0.52439092821115 0.254740744993702 -0.823687780663917 -0.419883086208853 2.04515842481638 -0.351718653615459 -1.09805408485602 0.42217457581677 0.42202085512649 -1.91663517213708 1.16021496947689 0.614160641774783 1.03219918682022 0.328241983653171 -0.102299434622933 4.1884877661631 -0.0580877594415282 -0.636920565050551 0.35038415454354
Rv0742 1.59868910059614 -1.00285542443628 1.18562665297049 1.14043498839726 0.182770020708194 -1.18928903064531 -0.926534096291777 2.82780701238901 -0.61278235439655 0.378454132880597 -0.632991780095315 0.324271303692632 -0.80579777723454 -0.942265256720282 0.220261339819284 -0.495626672602834 1.04467675939948 -0.844856634499772 -1.05872451681007 0.177107954609302 0.715005073645146 -1.19410973030594 -1.01520878828575 0.908393031110109 0.552116473051658 0.111725067038660 0.821547907042061 0.918598341498323 -1.43103141245385 1.99173814617462 -0.269001132502492 0.094199978531787 1.84390854746492 -1.08955657699039 2.92004224750757 -0.41471506230533 0.115170427788538 1.17114176918149
Rv0750 0.613336941703733 -0.563450323058199 1.15332664629361 1.08946518208269 2.00403465874383 -0.533561441899051 -0.578599892547772 1.75433590352133 -0.242546359502080 1.78573490752738 -0.836187395971514 1.42728543793063 -0.455224538732251 -0.356882542551246 0.080325181575334 0.417113798781479 0.803329193033388 -0.740890180545408 -1.13466504536484 -0.210763126239136 1.17417181653768 -0.0126732725636074 -0.192734678871701 0.672028390061017 1.15441105412247 -0.432505668583706 0.672437543882385 1.03144985072632 -1.56889080102470 1.92761857930402 -0.31930043293085 -0.76508507373748 1.22357207692392 -0.481481540697785 3.47071813676267 -0.0147744327021130 -0.616906709715243 0.314348643646830
Rv0834c 1.08791700316353 -1.02530624767705 1.39050721379314 0.4179511693054 3.22231730939588 -0.899065789033677 0.0628589516390973 2.70157920515143 -0.105842400512272 2.29212158773647 -0.644846129502878 0.954456536169017 -0.0653140194848112 -1.20183972298258 0.466780088574456 0.316738411128599 1.13454377675645 -0.705402011869319 -0.988552385553032 -0.58009753828888 1.53324087557595 -0.732856058179407 -0.801801098687455 0.987379648758183 0.556689818234487 -0.870870694057167 0.782763170297562 1.41215306905794 0.269417078287374 0.355652210545478 0.279789694050423 -0.00325285822379697 0.809533270832008 -1.03337522171034 1.46200279500757 -0.437648830306102 -0.336261603729836 0.696491080917293
Rv1091 1.93578477472849 -0.61397709970374 0.692050644043596 0.0816438237323097 1.08324583926935 -1.50412970329644 -0.75763887146363 1.61629559369546 -0.0901549815347926 0.448402421783451 -1.03839860451454 0.786674740717772 -1.27549893156980 -0.848715268593068 -0.077802718268831 0.137659408436871 0.948737172298586 -0.448686605584448 -0.848273363847661 -0.202910981550139 0.588134859702145 -1.51182408303924 -0.984438535717832 3.02910352179037 1.25245069452842 0.115144078651590 0.817371865767438 1.11345460028435 0.573433778148662 1.21167209174560 1.10833105515497 -0.221756608254676 3.32572114032653 0.113616404916207 2.21062012960693 -1.10402683609845 -0.948387627972813 1.18529373358667
Rv1243c 2.37808988060716 -0.68466094986901 -0.162743229111508 1.48532295832833 0.784956765742106 -1.06737430495119 -0.311419662403549 2.67656801441048 -0.359676554354831 1.34729993880817 -1.37539224783183 0.615394166692729 -0.41226374617663 -0.597546473474121 0.275054920019682 0 1.94107168983369 -1.43736531530000 -0.47891617035107 -0.623771997389011 0.262499491096138 -0.999793351896603 -0.685993253492656 1.98445570288352 -0.0724384065887544 -1.46957269531509 1.34678778390382 0.516882475768991 -0.420843602634921 2.20507124099836 0.184717846847654 -0.167029892588601 2.51408823689333 -0.973406619340468 1.79862785406296 -0.67312972896299 -0.369063149401812 0.38027949243523
Rv1397c 0.307292725653922 -0.521548929589637 0.109318450071349 1.81376822895770 1.85340758910644 0.0337147847471304 0.625392951484803 2.28750584043968 -0.511657853559773 1.77692598250212 -0.153300386011813 -0.350975271710439 0.434983396490062 -0.208271843012221 0.473726234062698 1.12010179319177 2.57537213248205 -0.0965369177379133 -0.0039900421653318 -0.772986872475188 -0.090393362071973 -0.302801305790517 0.0392419514328429 1.45996793120567 -0.313644536578034 -0.766608263890248 1.21563694900779 -0.105843262866683 -2.79425561032045 2.33357318104106 0.205092888202152 0 0.222833559997394 -0.246255236065362 2.90408143696313 0.60690674975147 0.110613879893291 -0.151732885659573
Rv1398c 0.71987138917218 -1.05771119521529 1.13905930731357 0.647297228621145 1.15185797155910 -0.679150566719879 -0.311058061222942 0.21194437308344 -0.96032727412571 0.593976580851979 -0.852634061693308 0.162712726564451 0.228304431918452 -0.0731535136605572 -0.0739378749618656 0.731388814177221 1.48696870625692 0.0650442366754603 -0.135078930514206 -1.19484875660983 1.11783970512703 -0.932476345049896 -0.748009042938695 1.25748711343707 0.970845791873425 -0.474570754959862 1.04978734637702 1.69350686391529 -2.42269840380308 1.36912005472392 0.885258738498383 -0.406898447601133 1.08784180294155 -0.0672914543046386 1.88579354833879 0.77574703745101 0.00919849775300935 2.33799631535332
Rv1628c 0.518096485417996 -0.164726204161551 -0.166046576916563 1.15214702859444 -0.61211292363989 0 0.345612101662150 1.30225529425105 0.315378866905574 0.79651477592644 -0.381118144298921 -0.153006287478394 0.133421058704737 0.372907834862278 0.22638370979942 1.25972939256416 0.943527504675533 -0.384177506358618 0.184905615318417 -0.614684093745640 -0.334408725191112 -0.413232765236678 -0.220093190382944 0.481440570082138 -0.563907246115773 -1.59160288967254 0.903621290107697 0.590706056431743 -1.92934632901778 1.29499002560190 -0.614414161567608 0.128220283143214 2.46060079191160 -0.634233003075018 2.89182294098391 -0.0838591460531842 -0.389404048273759 0.129777129926300
Rv1993c 1.19121387955302 -0.383465695293576 0.507593116340766 0.325731908640055 1.17182504490136 -0.638128438046917 -0.300664616383391 2.26316251762691 -0.065044030293491 0.981400372480428 -1.01096057776549 -0.0935010249903949 -0.468348842451284 -0.96218731286498 -0.335938272026472 -0.0910701458248296 1.11219511149735 -1.21493811471196 -1.04443803570487 -0.33075073151018 0.803675431660412 -0.74317813019828 -0.284256918901846 1.18990034470023 0.565352033454251 -0.546427289339805 0.648763201613523 1.83332655138267 0.0197539946885075 0.623711554185357 0.432479231283728 -1.21729500550633 1.91241545872929 0.184674285825248 0.90085129191307 -1.02152762136750 -0.131026336860599 1.59384110425943
Rv2008c 0.563474508218027 -0.399865208943317 0.770000515226427 0.448016663627514 0.497948192966303 0.196022909893154 -0.119704477439345 2.3169399269244 -0.526796216348517 0.629552305516876 -0.130008986510895 0.634800748674011 -0.232617074377749 2.19631726251346 0.348660881389378 0.366424698002857 0.205448574404575 -0.29914598555775 -0.283000868218095 -0.659301897343157 0.710627277579521 -0.112490575329651 0.0399631346794534 0.374101117070643 -0.163711943189398 -0.867051841175756 1.81836919733512 0.640481579452122 -0.850113472456267 0.828618025855207 -0.173493813358945 -0.342053907789016 1.01759012857702 0.184511242429889 2.79943217203037 -0.851454121354599 0.169776770642534 0.696987511606835
Rv2161c 1.89251075614584 -0.188591435036435 0.377039270609465 0.562580579925996 0.877231179779892 -1.35969564098704 -0.266245781036826 0.00681236806017208 0.38218294705637 0.481880193251542 -0.446421377259041 0.674386274997307 -0.503922934443955 -0.209799144799214 0.965870255894337 0.199951960675871 1.74661089069034 -0.462569171349538 -0.899697779447063 -0.843197374107365 0.516511391150456 -1.1382947950368 -0.694842009951723 2.09147638686656 1.44969975364044 0 0.671279769189036 1.09443078860682 -0.126093581059698 3.04135122793383 1.76422825282501 -0.253800257896588 2.83030264729593 -0.658419219976348 1.76261095962436 -0.063690546293067 -0.166432954464996 0.326484091790182
Rv2162c 3.21305435628402 -1.13069972958611 0.516744230646574 2.49112033410508 1.20795425637525 -1.49833328617333 -0.295719195000482 1.36267359389798 -0.231239131738276 0.227897782191138 -0.675310016536202 1.75918460729150 -0.00581576539062077 -0.55519593710791 0.535916421461421 0.211153934581054 1.19120277148713 -0.0203766825986385 -0.745839622990644 0.0640456087183582 0.710261855705982 -0.801019631696004 -0.961523321744401 1.35601250391083 0.393543459140114 -0.981304161250659 1.61970541551755 0.936648255078741 -0.492008161567725 1.81400802150435 0.224671439524690 -0.863680224299877 3.11509302735456 -1.10216748779355 1.85664201673495 -0.125893998532619 -0.510860870868167 1.36594181274054
Rv2165c 0.188402429060356 -1.52746201541423 0.184353584177895 -0.302113677153021 0.931117242155259 -0.818043940448986 0.245630856643558 1.20209114803145 0.0515693887744423 0.90662354894732 -0.450368493429562 -0.486151715361364 0.333244735246816 -0.553518833763166 0.0675967659506637 1.29051252374643 1.09242067765521 -1.22115543388654 -0.710103490956744 -1.31710075235638 -0.273721515037787 -0.38324303826294 0.406618095558967 0.796353996659422 0.381654590510348 -0.463363915107087 0.900225164371945 -0.366258671962595 -0.813722113151262 0.310447078060540 0.665199430868125 -0.0952675121447993 0.765303229742667 0.237092131531908 1.51269338971984 -0.415746369808273 -0.83339629078256 0.435933287224912
Rv2166c 1.86102056111469 -1.18250771357561 1.37451346261712 1.12116593112409 1.84919675919078 -0.399097596931657 0 1.16093315522815 0.240834607771756 1.07283910993109 -0.435816307634932 -0.0371428028749104 -0.344650748401793 -0.136168734199819 -0.0882720365625834 1.02151231684431 0.57292305867394 -1.05978891202700 -0.41249168704748 -0.399825176551579 1.11795692481869 -0.578848544599687 -0.0769093944527744 -0.380844302792613 1.39509403531436 -0.0526103414251996 0.89217192567721 0.533762977068671 -0.778412103540795 2.08435075132932 0.849367765353347 0.157031012944041 1.42814691918859 0.415235178176882 2.25566721582035 -0.481407113216886 -0.4220169668221 0.807433527151564
Rv2256c 1.49514107803249 -1.36006864435476 0.0188871015018252 1.12616299950228 2.52841810538142 -0.627602798122241 0 1.26363592244640 -0.0084860676391197 0.975293548474789 -0.515162513992228 -0.0656930731434994 -0.202933262887771 -0.447148753881842 0.201826043536180 0.235426042977595 0.432704436765264 -0.238928871310103 -1.00916015873677 -0.579225922675626 0.242302792910676 -0.571415966069563 -0.210294480914721 0.280967450782095 1.86769847213237 -0.0715800000467962 1.53376724288164 0.423492198473196 -1.03819500889102 2.43978677779258 1.41455843511149 -0.433545852561558 1.66104775269984 0.272282745433737 1.75936397468671 -0.0346657375132388 -0.435433134402630 -0.702592210774174
Rv2634c 1.00801304317335 -0.697141917643675 -0.136184007733417 1.70684648090846 2.23576510421254 -0.631795049103526 -0.252074714046997 2.82565059203692 -0.648593974736377 1.56642290281033 0.0102738974272655 1.06772067326269 -0.499430681294852 -0.470010797867113 0.281840531595054 0.6693207635879 2.57500701512399 -0.179437526505358 -1.14753499995904 -0.690615700926146 0.0555869422590308 -0.676687287178702 0.133012564865021 2.31388810850098 0.751550304458963 -0.277423418519735 1.43229193976887 0.727699885634325 -1.25816288618862 1.78265928557495 0.492741040568945 1.03048602728187 1.03692344552288 -0.709964185977258 3.58413798396194 0.143882067092444 -0.617294451232456 0.808550290987695
Rv2657c 2.14951632272328 -0.583043559234294 0.441488784119599 1.83987108593332 -0.0083615989966682 -0.108756357208863 0.0310252015611265 0.00848278015256516 -0.211170006540401 -0.150932384248210 0.101501555311456 0.190356207948410 -0.0178090112439652 0.0752919170166966 0.237552021646555 0.165288018869281 1.69986386261465 -0.341204151215654 -0.584495289660805 -1.96078854833064 0.275623895152226 -0.9930900893099 -1.13514482637727 1.4494366009763 2.47086521090075 -0.63210082685014 0.634512958270058 1.03299291257139 -1.44366109804738 2.65336642282378 0.90493648657751 0.504969351791846 1.65607034655769 -0.614390638308412 1.83988302957466 0.253038753701599 -0.928017511762383 1.0188872253997
Rv2841c 0.468586833994316 -0.642515436903106 0.389376134571989 0.783069971897372 2.3000911743829 -0.533794570876247 -0.0459111201087334 1.36759209819075 0.118287149082416 0.192313810304705 0.047484952024514 1.44170690296645 0.251401918409556 -0.995691118418259 0.738756095133768 1.23310434771896 1.99806387184401 -0.199131770925836 -0.417540621464526 -0.515294429253877 -0.117762681262861 -0.447189202713719 -1.164170170431 0.724334316973095 -0.098768937677899 0 1.27482114377899 -0.494149743804227 1.17604727642360 2.33255958320194 0.427739165614164 -0.716434903964632 1.82868496911346 -0.0647531233065377 1.09384646193455 0.656196663249197 -0.486053751282149 0.266445996641535
Rv3053c 1.86558469430972 -0.666630019921676 1.32328298258790 0.77591371326604 1.67417644438294 -0.116413843800832 -0.511412187633889 2.29777593870348 -0.782077231329291 1.56522725242696 -0.470384515782614 -0.144539802036674 -0.396934208998325 -0.229497601741515 -0.271852012223278 -0.274919737208767 0.728580602715865 -0.190078103688394 -0.970349413992979 -0.211375209457220 0.928740175674728 -0.415920969077137 -0.729811880535502 0.184917852920009 0.748506944183465 0.15407235865844 0.995667902257865 0.973124783881945 -1.91669218461166 1.09298821357305 -0.43234871327936 -0.912790551067064 1.90649382607895 0.38477776312565 -0.0201359851935650 0.0310189612429216 -0.746593465339859 0.600393726070986
Rv3507 1.40433556746125 -0.807950787114044 1.21108037930670 0.78364415884264 1.84114217004566 -0.0181642804895801 -0.70372151509244 0.514773912525635 0.451360825486214 1.39933249700248 -0.68602417126298 2.31098126294208 -0.072709133296136 -0.426126438427171 0.345414622959052 0.757175987931386 0.279864690427909 -0.091284932092616 -0.0799162780464286 -0.525853168768713 1.12880462628476 -0.326965091691454 -0.468369922495607 2.75872601758661 1.25710526426437 0 1.51455002973287 0.550557044503262 0.419781344195571 1.16516639992498 0.399921089788644 -0.181323470459915 1.45446945073542 -0.245277347936495 4.55030386604782 -0.897800586550705 0.414602908995844 1.25949575482839
Rv3526 1.17998014317525 -0.194102356515442 -0.371803350964878 0.490461477090866 0.977638562641275 -0.461341319538564 -0.00637789823095839 1.8006850302438 0.331345997652868 1.2698315016609 -0.312571725619905 0.657896700334876 0.344532233956364 -0.121798268328124 0.325398757129881 0.645226342599426 0.918093256895816 -0.294547174205657 -0.1980231406292 -0.831822706860261 -0.346930634291216 -0.541893588473876 -0.130114712668660 1.07848723442137 0.0279426151198218 -0.242980538798002 0.203401389178443 0.623365856348259 -1.55560538264659 1.72567240043965 0.862399602626741 -0.0710526817856445 0.891547590189919 -0.361785297478571 2.02684936273679 0.297385241023801 -0.763005757888417 0.645641430122563
Rv3527 1.48296555774255 -0.354507563696643 0.253224402931134 0.569865028799188 0.476549721373829 -0.171342052357319 0.271322767615221 1.46810290202184 -0.209124892937677 0.785716247102088 -0.424294930712581 0.349453806303241 0.140809950822565 0.135976695815471 2.00940502172014 0.942346804502137 1.21580662385581 -0.331674423379534 -0.187877247319116 -0.524379031117129 -0.0977519813578406 0.460692876962877 0 1.86491198253031 -0.473576101334926 -0.670483939817936 0.696232547974271 0.671161806734784 -1.21319595676625 2.12864922025399 0.259822983079901 -0.798866053166907 1.18209225491434 -0.0400010003737485 1.91995422526659 0.406903460562071 -0.582355568702219 0.134558983806220
Rv3595c 2.12535056336391 -0.787749360765196 0.231503818453794 1.08724449781819 2.12788872752912 -0.588563458024953 -0.322594092856583 2.83641017031125 -0.61214373764447 0.606712895430721 -0.903911902245481 0.124630129556247 -0.387398461515109 -0.526735277870902 0.173255050842689 -0.191826919981625 0.51227074136974 -1.19490300834972 -0.765171988632811 -0.607274200157526 0.34992768580906 -0.97415893761739 -0.610041464730467 0.975758243959412 1.01739833055597 -1.04897561435355 1.12139032104812 0.867457483071173 -2.73620959664497 1.28822971910892 1.03716925353204 0.0384857299622212 2.35718975027559 -0.854165609697301 2.10633077133302 -0.574030684816277 -0.922287299194452 0.543765079112754
[+] Show/hide bicluster #82 motif PSSM #1. bicluster 82 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0 1 0
2 1 0 0 0
3 0 0 1 0
4 0 0 1 0
5 0 0 0 1
6 0.25 0.125 0.625 0
7 0.125 0.25 0.25 0.375
8 0.125 0.75 0.125 0
9 0.375 0.25 0.375 0
10 0.194334 0.118166 0.618166 0.069334
11 0.184889 0.315111 0.315111 0.184889
12 0.184889 0.315111 0.315111 0.184889
13 0.184889 0.315111 0.315111 0.184889
14 0.115556 0.196944 0.196944 0.490556
15 0 1 0 0
16 0.125 0 0.75 0.125
17 0 0 0 1
18 0 0 0 1
19 0 0.125 0 0.875
20 0 0 1 0
21 0 0 0 1
22 0 0 1 0
23 0.875 0 0 0.125
24 0 0 0 1 [+] Show/hide bicluster #82 motif PSSM #2. bicluster 82 motif PSSM #2 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0.714286 0.142857 0 0.142857
2 0.142857 0.714286 0.142857 0
3 0.285714 0.285714 0.142857 0.285714
4 0.714286 0.142857 0.142857 0
5 0.142857 0.714286 0.142857 0
6 1 0 0 0
7 0.571429 0.285714 0.142857 0
8 0.142857 0.571429 0.142857 0.142857
9 1 0 0 0
10 0 0.428571 0.142857 0.428571
11 0 0.428571 0.428571 0.142857
12 0.142857 0.142857 0 0.714286
13 0 0.428571 0 0.571429
14 0.285714 0.285714 0.142857 0.285714
15 0 1 0 0
16 1 0 0 0
17 0 0.714286 0.285714 0
18 0.428571 0 0 0.571429
19 0.142857 0 0 0.857143
20 0 0 0 1
21 0 0.285714 0.142857 0.571429 |