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[+] Show/hide bicluster #79 rows and columns.
bicluster 79
Mycobacterium tuberculosis H37Rv
12x35
[+] Show/hide bicluster #79 rows (genes).
bicluster 79 genes
Mycobacterium tuberculosis H37Rv
12
[+] Show/hide bicluster #79 rows (short gene names).
bicluster 79 short names
Mycobacterium tuberculosis H37Rv
12
short_name
[+] Show/hide bicluster #79 rows (long gene names).
bicluster 79 long names
Mycobacterium tuberculosis H37Rv
12
long_name
[+] Show/hide bicluster #79 rows (NCBI RefSeq gene IDs).
bicluster 79 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #79 gene upstream sequences.
bicluster 79 upstream sequences
Mycobacterium tuberculosis H37Rv
12
upstream
[+] Show/hide bicluster #79 columns (arrays; conditions).
bicluster 79 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #79 ratios.
bicluster 79 ratios
Mycobacterium tuberculosis H37Rv
12x35
GENES Amikacin Antimycin ARP4 Cap Cerulenin Clofazimine DCCD DIPED DTNB Eta GSNO GSNO_menadione INH KCN Levo menadione Min_med__succinate_ Mtm NaN3 NRP_1 Oflox PA_1 PA824 pH4_8 pH5_6 Procept_6776 TLM TRZ UV Valinomycin X_111891 X_111895 X_121940 X_124196 X_59
Rv1282c -0.768873505719088 0.569504347138904 -0.843345580764921 -0.836768090491243 0.568369223732297 -0.535478359778415 -2.92004313483126 0.110194400818395 0.075312924397182 0.350553842041497 0.0530247617137141 -0.381291537115137 0.428285801142592 -2.65671875132098 0.217989934967995 -0.0380512652911723 -0.0167323856545906 0.594281966360176 -0.350051472434497 -0.783110579161293 -0.178962426545218 0.271504255758623 -2.32993201100455 0.350829413287586 0.417175299202828 -1.40005516390034 0 -1.18807352964819 0.872733898957024 -2.45993572909101 0.577739901110837 -0.270763717386346 0.209735131211038 0.158461036312234 0.4611399675138
Rv1613 -0.751620160816323 0.108023352168227 -1.03459172449534 -1.85944307841185 0.0285958737045602 -0.91623298694143 -3.17832107075124 0.321985722323211 0.514888105384947 0.594947279005196 0.56954674236327 -0.266436553619177 0.898778241184372 -2.25317331183775 0.0124749481664730 -0.441286573177218 -0.537324552783987 0.453114804843477 -0.222590665707976 -0.737208912354625 0.560596718779205 -0.213942959717379 -1.50524908030383 -0.136087261240237 -0.0462109896901967 -0.873336860751487 0.70461801222051 -2.55793183587639 1.10018188491143 -2.05214672583133 0.444552673410198 -0.659297981945514 -0.361498194768622 0.567298545340859 0.59483397461651
Rv1614 -0.607624564218457 0.476486005158897 -1.30390132828753 -1.45371364676856 0.228651359047075 -1.02673032609732 -2.43618607514247 0.423132115528764 0.414145152683785 0.487877104548229 0.775854719996583 -1.07394232780732 0.873373683007156 -2.45353846398898 0.372904366929968 -1.04686814562909 -0.985490534490962 0.725595068825721 -0.627522634089526 -1.59417074968129 0.277459219707378 0.151456808867107 -2.16617387810832 -0.354937419855651 -0.119636943419191 -1.16370261386038 0.49237725182734 -2.39379671615661 0.65987636248204 -2.2245657925669 0.779889650040252 -0.364532682292125 -0.0831689835797797 0.754128042017528 0.591056473622454
Rv1689 -0.814974573589833 0.280586896742064 -1.52056903179879 -1.33307476431912 0.606099506215761 -0.95221481443977 -3.50793095746944 0.973425717484465 0.174717283836446 0.481985056016074 0.0687071822203865 -1.23825826686466 0.567652509099815 -3.05267198069960 0.201808326243657 -1.29603398404203 0.00246462456832408 0.784949561687902 -0.367069516421879 -1.19678492310183 0.490870385640348 -0.0255035961345613 -2.37079158375434 -0.291873371036364 -0.0101844718064429 -2.07656530971489 0.304203795480773 -2.06060076046494 0.770966382389292 -2.22473478943665 0.364334929503871 -0.218699669355987 -0.266826239070362 0.334667283133081 -0.069549713414127
Rv1860 -0.668094766220318 0.551052349808362 -1.42198675353087 -0.0549164368790571 0.87041512693922 -0.562046323232737 -3.46638636486375 0.790192358456654 0.975003279635329 0.62609062644156 0.804118668058737 -0.93086110534723 0.623897180384205 -3.1813130584935 0.473421539804336 -0.78500337729245 -0.113009524590309 0.586089048308485 -1.22966447348783 -0.541640808313635 0.321197241615958 0.229316924961139 -1.73725837972617 -0.105870779977914 0.621568771357914 -1.23974994563617 0.349800093016225 -0.993268509784434 0.492927745000149 -2.27733674062125 0.409888904180668 -0.123305787216082 -0.483161150924134 0.0155443400277507 0.181985433159472
Rv2564 -0.353385355137808 0.717608849604017 -1.37257261013966 -0.248098933362301 0.375257614035032 -1.24298779948990 -2.91863960102792 0.560996391475093 0.359114181068374 0.587615265706358 0.677258104309873 -0.325695851706128 0.973094668518574 -3.09769984356276 0.0333980342412887 -0.403500834694978 0.595749286791785 0.544224759396783 -0.839352962522863 -0.71356289389267 0.543549898621286 0.536611005323295 -2.53339081206751 -0.47187495423134 0.304371675866149 -1.34281104352441 0.276287041623647 -1.95222410920289 0.354098025072467 -1.75444314744170 0.560180843393353 -0.268986816279619 -0.0154257842155601 0.0852590632571913 0.333986237473474
Rv2948c -0.493815459953437 0.671525784771027 -0.344652983074570 -0.73691813886615 1.34527516530025 -0.992078636140839 -2.61673851567559 0.476348060848991 0.200132869547522 0.351047543399566 0.154024439484075 -0.83373320246615 0.778065226796618 -1.73000937871452 0.36621365114414 -1.54982858017191 0.092362048488599 0.738538870437144 -1.08109905653338 -1.17309121763612 0.569003995178502 0.341688767716362 -1.86729437947026 -0.378008441898507 0.180971605123164 -1.63757341105070 0.0709663078417053 -1.09836267601416 0.73415294547229 -2.19839401550434 0.417561003335470 -0.0389401852312455 -0.137602559389347 0.510798314832682 0.522073595591001
Rv3791 -1.30333594434482 0.580537789020596 0.0361869540341447 -1.54637984223697 0.424743969631336 -0.844368632833417 -2.2356284959365 0.292645770421804 0.625416673859754 -0.0595112720515291 0.697111365303181 -0.738863444223354 0.792553713086139 -2.84009702617104 -0.0472359466229684 -0.770094422104887 -0.013257565723893 0.425305189769919 -0.396977149096631 -0.575542273323857 0.948112290046822 0.579068473694507 -2.56056376104783 -0.462222472123979 0.524566873789831 -2.28573408036065 0.322211784953711 -1.29437447953871 0.209612932024843 -2.37403140467201 0.505719541291852 -0.275273260351798 -0.00988300792086736 0.276065178801188 0
Rv3794 -1.14043322009327 0.487013591184317 -0.701882463058522 -1.22815620348126 0.862920408657361 -1.39971490460679 -2.1775342410805 0.179634679480780 0.309841301196871 0.711252712887913 0.548318378904803 -0.225644486986362 0.775673318070142 -2.79988617632537 0.081840388103726 -0.599971286025315 -0.885117968360721 0.83289583737823 -0.416061481213101 -0.645549750616884 -0.00424668351131943 0.280515622861519 -2.30332484914628 -0.665246859750301 0 -1.44400631473066 0.206435843720524 -1.48181379099827 0.457758210571435 -1.6119169381865 0.657740627188017 -0.170641986323486 -0.296635884230133 0.609422636864887 0.613386390476088
Rv3795 -0.448766914806429 0.747518175324441 -0.507927070418357 -1.45931578232353 0.479980151540474 -1.18119400154283 -3.39515347212648 -0.207099254108682 0.549424187733093 0.202579276233354 0.39087675141271 -0.63893461128237 0.380154140761587 -2.84529031672546 0.026955220602963 -0.153423969234769 -0.973769723531716 0.427858085604239 -0.342806228338725 -0.658846251184496 0.286919134777158 0.355663033198801 -2.10269835421062 0.113524774930305 0.314973938684569 -1.6111462714108 0.373022941255939 -1.37841816680639 0.305882292864366 -1.70008363925465 0.499988994046993 -0.108309541596994 -0.485621105956063 0.256003321738177 0.336733049398097
Rv3920c -0.242970260355725 0 -0.195319768692890 -0.892404623786824 0.12389037052403 -1.01142302320723 -2.96883266048534 0.607279612142675 -0.041694785805943 0.403870339779875 0.288710571485575 -0.736819030679578 0.94190821462641 -3.38005684593097 -0.225919607700816 0.114941414771808 -0.359940117136311 1.11839525356798 -0.173849123485311 -0.715403392242374 0.322441885832885 0.183940474810360 -1.80722047774949 -0.0972876905366919 -0.0149348091951257 -1.29711848547323 0.399579738878548 -1.70672106729555 1.06545640170382 -0.878106384236486 0.311651442759766 0.420101946608743 0.0206140047940103 0.426426711432768 0.779092651705198
Rv3921c -1.11403382404696 0.240881430769319 -1.32572140162222 -1.15940739845658 0.412645096868937 -0.262387911552637 -2.97849694001155 0.396222096558781 0.374098622848018 0.204373098540634 0.608382803129558 -0.575544743057774 0.663600704395274 -2.55597860360174 0.304279801043986 -0.637403160229475 -0.723154142001461 0.601463802120337 -0.555728315832362 -0.827906103262809 0.726253687627390 0.321439050822834 -1.73876145584210 -0.900937365538759 -0.381577364682975 -1.53833241586902 0.19598609427616 -1.63398327152143 0.945492316624038 -1.22943237579193 0.820608858026977 0.673631020377023 0.247174301277235 0.746293291705657 0.282309112154282
[+] Show/hide bicluster #79 motif PSSM #1. bicluster 79 motif PSSM #1 Mycobacterium tuberculosis H37Rv 13x4
POSITION A C G T
1 0.222222 0.111111 0.666667 0
2 0 0 0.222222 0.777778
3 0 0.777778 0.111111 0.111111
4 0.111111 0 0.777778 0.111111
5 0 0.333333 0 0.666667
6 0 0 0.888889 0.111111
7 0.222222 0 0.111111 0.666667
8 0 0.111111 0.222222 0.666667
9 0 0 0.444444 0.555556
10 0 0.111111 0.777778 0.111111
11 0 0 0 1
12 0 0 1 0
13 0.555556 0 0.444444 0 [+] Show/hide bicluster #79 motif PSSM #2. bicluster 79 motif PSSM #2 Mycobacterium tuberculosis H37Rv 10x4
POSITION A C G T
1 0 0 0.777778 0.222222
2 0.333333 0 0.444444 0.222222
3 0 0.333333 0 0.666667
4 0 0.888889 0 0.111111
5 0.888889 0 0 0.111111
6 0 0 1 0
7 0.333333 0.333333 0.333333 0
8 0 0.222222 0.666667 0.111111
9 0 0 0 1
10 0 1 0 0 |