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[+] Show/hide bicluster #78 rows and columns.
bicluster 78
Mycobacterium tuberculosis H37Rv
22x38
[+] Show/hide bicluster #78 rows (genes).
bicluster 78 genes
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #78 rows (short gene names).
bicluster 78 short names
Mycobacterium tuberculosis H37Rv
22
short_name
[+] Show/hide bicluster #78 rows (long gene names).
bicluster 78 long names
Mycobacterium tuberculosis H37Rv
22
long_name
[+] Show/hide bicluster #78 rows (NCBI RefSeq gene IDs).
bicluster 78 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #78 gene upstream sequences.
bicluster 78 upstream sequences
Mycobacterium tuberculosis H37Rv
22
upstream
[+] Show/hide bicluster #78 columns (arrays; conditions).
bicluster 78 arrays
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #78 ratios.
bicluster 78 ratios
Mycobacterium tuberculosis H37Rv
22x38
GENES ARP4 Ascididemin_Natural_product Cap CCCP Cephalexin Clofazimine CPZ DIPED Dipyridyl DTT Eta GSNO_CFZ GSNO_CPZ GSNO_menadione H2O2 INH Levo menadione mercaptoethanol methoxatin Min_med__succinate_ Mtm NaN3 NRP_1 Oflox PA824 Palmitate pH4_8 pH5_6 Rif starvation Valinomycin Verapamil X_109 X_111895 X_241 X_59 ZnSO4
Rv0040c -1.99738415744154 -1.71552913874581 0.435532992316842 0.0369787466481785 0.559812248640486 -0.702900618343969 -1.31419593837260 0.568386451142642 -0.647619407590157 -0.683833052325079 1.81514200288989 0.28515152673179 -2.67043249596155 -1.47443314325378 -0.500405586855019 1.10435271417146 -0.0119251939527633 -2.03846206985155 0.605146406020533 0.503784140687605 -2.92054188869117 -0.0956596221331125 0.638581161973583 -2.45130532116231 -0.686741473575847 0.732593561946121 0.86610307317341 1.11156206032297 1.00026639096192 -0.98201910301758 0.808106170018652 -0.926973686497432 0.357284820067644 0.771648500771746 -0.958513820313517 0.271818455737876 0.887963979565242 1.10519151651758
Rv0129c -1.99302713428110 -1.00007312788030 -0.26134018694791 2.68936209126913 1.12378199740129 -0.129693596472952 -0.0162397797417882 -0.334707621941914 -0.49395825361576 -0.175362668912280 1.90714573506569 -0.321461198272164 -0.846604000638435 -0.242828180598693 -0.92951524220172 1.64787922516309 -0.432157543819301 -0.544875680504506 -0.0555691614139939 0.252103908669079 -2.12188692646165 -0.26336796288937 0.259868470510636 -2.42806660374310 -1.42587804121200 1.01038680678795 0.377195201450659 1.60168324047111 0.490930866000167 -1.34601426288485 0.4978368873362 -0.980166837703137 -0.000264811812445323 0.393671736147668 -1.10624522623079 0.485501700568182 1.12615084980608 0.121867435221876
Rv0883c -0.277146933945331 -0.711021153050349 1.09431536747703 1.90877779517125 1.05564178915943 -1.58727063669005 -1.12318614925486 0 -0.78491887441096 -1.03859372688525 0.791369992796081 -1.72858354673793 -2.22046750875059 -1.64090360219392 -1.24412841172621 0.579410219838951 -0.187562540134633 -1.31726441150052 0.100402037435682 0.289444321204002 -2.8532159415651 -0.673110644576593 -0.109699887306992 -0.607890231074336 -0.117206101137353 1.02397591629958 0.770231890441175 0.841196424004325 0.311725217694766 0.0608184010424268 -0.198870283825962 -1.75494687246878 0.161671499899217 0.213385419587054 -1.2263442211055 -0.54797680370107 0.203839476810588 0.523071088553933
Rv0994 -0.683756678739787 -0.768541001004373 0.701554729993153 0.0820973898210928 0.52058563100639 -1.16411002472514 -0.707376149217999 -0.0158901070683445 -0.510144244578681 -0.74558181760832 2.27848301990968 -1.01415802840640 -1.6198077816793 -0.98115673298927 -0.746930401627693 1.85883030761391 -0.108014096874652 -0.353358446969902 -0.0986374197131398 0.186900627683731 -1.60848214300232 -0.309265486291523 -0.0261042467926096 -2.16515665659483 -0.615550804201265 1.93908932007145 0.272506555707786 2.7050089906284 0.693378368120444 0.670599393159009 -0.259290965708125 -0.691748974780011 -0.00598666525283446 0.960202999252792 -0.486450582898525 0.329153265351935 0.848435013434394 -0.273449915584108
Rv1157c -2.02430123477488 -1.98949249032258 -0.0229947160436674 1.81953664940691 1.73795453428416 -0.97159897913111 -0.197992845415755 0.384229707151993 -0.746212065492871 -0.266561661214791 1.09217276919099 0.0153937390457440 -1.31093158218434 -1.07431470989617 -0.416481103159823 0.874346201126629 0.503654862414775 -1.71724764236699 0.137100557853199 0.241688499663024 -2.96758738242627 0.0454656280497929 0.204295585502571 -2.64779048217116 -0.748556487407395 0.391299310098552 1.00941604707657 0.555268976175123 0.660124914660493 -0.351375485710076 1.66890526471143 -1.52132345781117 0.55080746918161 0.396813935591624 -1.52129433599072 0.237993592965712 1.12115505359282 0.510433807519785
Rv1158c -2.28647063342649 -1.92048435950573 0.0784028594455244 2.13543695139386 1.58928999096164 -0.751989312317494 -0.197625745362197 0.790217431527691 -0.833667228258087 -0.0735635755095898 1.15543235863125 0.0219255179172465 -1.23984797294777 -0.798386733377108 -0.885925627766887 0.850383893330015 0.039675018129089 -1.22426961900233 0.241616049347506 0.185025969446376 -2.92959882622811 -0.145247841481515 0.399005939229666 -2.15151831644101 -1.39660821451224 0.194923728402703 1.28685371601537 0.817749653809275 0.376025742840497 -0.881353638623523 1.38745199964915 -1.00532152241103 0.480010313838186 0.450488518704016 -1.8546325451921 0.269614358626631 1.16278640803879 0.653967515840803
Rv1566c -1.58939072725125 -2.18987579720019 1.74771674025285 0.785071758940162 -0.117239590195115 -1.08941077529816 -0.371716108740128 0.168705912179635 -0.893179956738011 -0.139860122374584 1.30977417318274 -0.84944068781672 -0.860081157482814 -0.726738336623527 0.134626315034642 1.08273086481236 -0.0901175579261905 -0.704298061923339 0 0.253260473227407 -3.62784030660064 -0.232496999237008 0.110140352324638 -2.50687916899671 -0.67956190678606 2.19617502967042 0.214450033029483 1.96974587437964 0.722647889472778 0.232442630811042 1.30157949382956 -0.432997945299098 0.0254299222973616 0.214008240905341 -1.71050391583077 0.243695705441931 0.451316094549342 0.432684381475274
Rv1697 -2.21467641747146 -1.94809936208497 0.209167155930958 2.50957730295444 1.30189385039364 -1.17109719009672 -0.59444119842347 -0.126719972055271 -0.680042042185118 -0.88024260719636 0.952600383768064 -1.37380516936112 -1.49448030880372 -0.80295628958351 -0.483934832664691 0.601400950678719 -0.325900330294324 -1.94018432988279 0.071129580237218 0.329297900127855 -2.9300771398302 0 -0.258292882766504 -1.37716393066046 0.0865639718099803 -0.0277023509059069 0.644815956249966 1.73540135187749 0.978283300967008 0.197803539451113 0.675698374504799 -1.81171539028206 0.754538713776238 0.313016115904808 -1.37448907517059 -0.202438679310527 0.344903917004735 0.882489037270112
Rv1698 -1.79999558233213 -2.02954681002957 0.497012320657736 2.12682539203057 1.66184533307603 -1.44355339712425 -0.636129512853744 0.0965142037909194 -0.814095871986145 -0.922152150004874 0.922498761054533 -0.846620458780183 -1.34496695177347 -1.49143155290372 -0.844139858995264 0.784465669519307 -0.122553658778243 -1.275069635188 0 0.450814165963483 -2.58870663270523 -0.0890929552198854 -0.0344400708444916 -1.25578027464398 -1.98463867276285 0.2686946923348 0.743339606604018 2.06221965452507 1.27713761676881 -0.603890869745009 0.529755469031124 -1.53511740688385 0.4132507635874 0.587431731890531 -1.83518512264535 0.156626080629813 0.461996601476164 1.15748332059044
Rv2145c -0.924633875477 -1.27587742798383 1.93192116607285 0.917726609100911 0.567048539253171 -0.637474072557822 -0.144270315816462 -0.602975787336923 -1.05194005393376 -0.770922596228678 2.88395731088699 0.28325728329389 -0.416533697591750 -0.450998041686026 -1.03055562498793 2.84113205870117 0 -0.266419651590791 0.705189805755727 -0.0545330130854048 -2.86236051049594 -0.575602263578498 0.103225224759588 -0.8786688938771 -0.988651142139558 1.21187138219816 -0.0122357002463722 2.07498950466226 0.315015975045288 -1.05069237254914 0.412744735842848 0.208638094777561 0.741609055791341 0.297002081338015 -1.22400844236499 0.429714871138472 0.87157761584909 0.929099644086672
Rv2147c -2.35776051451125 -1.14372092852209 1.53436110720924 -0.0378576173995315 1.87415955300155 -0.767807323840593 -0.083557481383446 0.521988786614785 -0.795700118163509 -0.919564991756232 1.28388700172055 -0.589840239325155 -0.872949936280425 -0.795052278381133 -1.09761952475462 1.34890152099302 -0.340222407291976 -0.910926564680067 0.781716160670255 0.387938892507258 -2.41663172657886 -0.150112663721192 0.0304453652435076 -0.414438318855842 -1.04573450876225 -0.109457283445689 1.23321046650991 1.83222736557125 0.789686003919337 -0.517660975150063 0.32334922094627 -1.33222592866809 0.826503961099804 0.305705469531606 -1.22332816591626 -0.0280740865053488 0.532525960948679 0.820464469985421
Rv2150c -1.19002452867229 -0.230411442393866 1.1769334767503 1.68794108800356 1.08463587256363 -0.418756544722492 -0.490347987965272 0.324129644555034 -0.39813793243555 -0.847251469565478 0.8367605482061 -0.462369232516779 -0.334278339620432 -1.60241183325794 -1.18736177583878 1.21498346861543 -1.01495445022780 -1.35421872679377 0.510091897255609 -0.332580142035264 -2.50036677428715 -0.155380578704147 0.185288041355862 -0.384339924588113 -0.191678298781409 1.34373039506070 0.686817368285805 0.986594272304917 -0.210520090982062 -0.375310003976343 -1.20200242265982 -1.13870061869236 0.509822975030062 0.347378296876037 -0.722358718027992 0.331106460557254 0.465895313936665 -0.0150205514653797
Rv2525c -0.572948620382827 -2.43135528823186 0.798641285306992 0.853515800860764 0.918513649956712 0.00757430245694019 0.307515396597620 0.414595297099688 -0.824640105315712 -1.42466644039296 1.38532427628382 0.0319823258695481 0.159660901070540 -0.562942302641036 -0.905020255403466 1.66087772561009 -0.0638316290707673 -0.350482664333218 -0.280867161080997 -0.0412126201021742 -4.20639480832650 -0.795017182730604 -0.326952979031719 -2.5470387229767 -0.890175092275702 2.55162870091285 0.803535976484252 1.26074664959279 0.97544361820607 -0.910700383492406 0.372014993161620 -1.31790294345437 0.509092640520677 0.100641518370549 -1.51477565156649 0.299026470999544 0.146186111479915 0.333254397205148
Rv2927c -2.23608166190448 -1.67442478509859 0.840443188110794 2.92835749044599 0.683443151926035 -1.02528255364481 -0.151507664166686 0.213433985766730 -1.00549633569875 -0.633935378198872 1.15506624082102 -1.10546866052513 -0.777661302574446 -0.612721668986523 -1.60425152872714 0.965079253649318 0.0678823268513672 -0.732477808558174 -0.215118480572283 -0.197468568073158 -2.91670039596591 -1.07255222491832 0.442039368128396 -0.941894896444806 -0.632451778530005 1.10724061427680 0.836932884290682 1.64470396072642 0.418188470623592 -0.84725127032299 0.404962765191873 -0.712611027807402 -0.170457168074232 -0.0983291868611005 -1.84013127427906 -0.217844422782605 0.0987123262065872 0.603506125358678
Rv3005c -1.89389542185325 -0.560025151320845 0.75941770151889 0.391156995897019 1.41860547222733 -1.53438296100883 -0.457525295978495 0.585671187413164 -0.273993322462824 -1.03593769722037 1.42210463959921 -0.293839148250602 -1.36199966629695 -1.16332233468040 -1.96150764487193 2.01875758356081 -0.330451482248036 -1.28346452680017 0.529901183404542 0.0736458145428846 -1.40208876133195 -0.556665977886787 0 -0.888393103581336 -1.09670848165635 0.170098469227358 1.20067457000811 1.85656449845354 0.424016709373032 -0.468095986361699 0.253306608910224 -2.61435812815664 0.591378865479349 0.261666963766056 -0.571256326398052 -0.122212307918628 0.726099667461454 0.0678095381833616
Rv3258c -1.32338131235054 -1.01406856858264 -0.144048582929844 1.75269585483512 1.29544053650936 -1.18012735822253 -0.9722909295881 -0.251299489478946 -0.81175469682158 -0.959948611652171 1.77640772523172 -1.16342667166466 -2.00724983680665 -1.24249307192721 -1.55227573553802 2.31065641716611 -0.121885648228487 -0.984906153120292 0.246975515467502 0.194841637542394 -2.70527862285649 -0.333101979988839 -0.0672316645959406 -1.34678620140685 -0.883741490381623 0.959383771368313 0.825180658696525 1.58450052531652 0.290383032487414 -1.72245023755002 -0.619025134637136 -1.40006844185623 0.339786947602696 0.327027949216343 -1.12522155601756 -0.0452712349765438 0.485381957133145 0.519195542045854
Rv3310 -2.21206536899763 -1.09099549432191 0.908162983504896 2.18720633907152 1.28595231834857 -0.948539448929434 0.457968096467521 0.253554402611493 -0.105789510109456 -0.237921987436947 1.64567141988752 -0.101150436233760 -0.523433142572512 -1.65392978176457 -0.72008665923985 1.73699584968929 -0.184815979364435 -1.02581122721574 -0.164839049898146 0.450327098935073 -2.20123081426241 -0.459124430795216 0.133557184854087 -2.83702516940389 -0.616374629057594 0.278726508830472 1.25332966524095 1.40047716743773 0.91249940484919 -0.664169313601202 0.98477793501581 -1.95646984715756 0.420295586370832 0.334895454836907 -1.00374384878931 0.294529028279121 0.55100142153966 1.13624668625569
Rv3330 -2.19666378716181 -1.13334481129774 -0.982201151125458 -0.176302990009134 1.47465929791043 -1.46755797896431 -0.763694778387182 0.370407948408755 0.154330094472632 -0.680950946724766 1.83916829728558 -0.465322569154827 -1.60440063192348 -1.28856465042362 -0.249982642134395 1.11770483171134 -0.138117918219116 -0.48579844091638 0.510597206982670 0.691450207961023 -2.19685745683302 -0.0631917784158575 -0.156696234608977 -1.12182884878389 -0.0344158412588687 1.15837881646950 0.899399095405956 0.919532496198456 0.669259903466169 -0.872950493242549 0.0969606248750548 -1.35692953772860 0.833614348525419 0.963929404935725 -1.08131934170472 0.304519191558447 1.11997445978514 0.76504817573938
Rv3414c -1.93550096812952 -1.15117407781539 0.495579614544326 0.941730859315027 1.3050529802147 -0.729714170631368 -0.72151132900727 -0.0543486648770246 -0.697281377690949 0.0386404616390847 1.71302510831186 -0.850115760456474 -2.21883957556498 -1.41749754943981 -0.59189027473819 1.89599730008408 -0.132269576450744 -1.34442125336739 -0.273260138202811 0.0388453335273685 -2.71938697657247 -0.0496246238709536 -0.0759610978656536 -3.24579578078923 -1.33644267509542 1.54153624288569 0.731531120159094 1.81298953288305 0.844009928782116 -1.04971345511921 1.07113370597698 -0.524985379441111 0.0611729307243625 0.318174063670678 -1.06895101148077 0.401212387256842 0.763515275101726 0.492374909244442
Rv3587c -2.50013473734076 -0.348785605263843 -0.433041142759468 0.65528216109591 1.29971757871001 -0.92557735476274 -0.716625515825144 -0.0970010905403267 0.306849850069704 -0.97606064710347 1.03285327134103 -0.10613862908724 -1.61294653738558 -0.981720270740054 -1.67168057619897 0.763153454275964 -1.03706954602753 -1.653585610008 0.528242890190985 0.49148344929087 -3.57954023586211 -0.234661923763889 0.383863973914006 -2.04158275125910 -0.83517961764333 0.520685571691658 0.823633788204909 1.22029572132427 0.338148112120067 -1.12406250547325 -0.731605964046856 -1.96525783947485 0.394048341448439 0.0425589288974374 -0.32865054185316 -0.496071631360711 0.704899429986168 0.167038021042330
Rv3810 -0.831007558072625 -2.31044076341328 1.42442399242519 2.81001843051574 0.513197224691333 0.182361278288799 0.213643747391546 -0.203150157950382 -1.21660139922734 0.00533253879975885 1.19577298502356 -0.554370447561247 -0.0738357129845093 -0.336305520878873 -0.790212984806527 1.0632831154085 -0.638716723513328 -0.364773120579464 -0.0350571047782471 -0.440003967457154 -2.60935193603601 -0.7577207198333 0.438402851823029 -2.85054902545623 -2.15625066573603 -0.451403716598538 0.814218562112957 1.60769814539897 0.409079133221798 -1.97035327980523 1.02577197529418 -0.51745004837253 0.372947991902672 0.420049157774375 -1.78079728358241 0.274894692491582 0.651533073393299 0.893358082204783
Rv3812 -2.01696299021631 -1.55156296049186 1.5487124264 0.500679034587086 0.26722911666314 -1.08282605388172 -0.322368814738296 0.108839364539587 -0.422949237976108 -0.502378597954691 1.08687840827080 -0.926061703548188 -1.25605531726820 -0.831524021357915 -0.279078971271234 0.377167376863025 -0.252962229622823 -1.28519835631266 0.421379298786088 0.543896152304753 -3.29217944018491 -0.431295563316432 0.251611054411086 -2.63200471594573 -1.44453926988552 2.24246617145979 0.139969288681547 1.06277437337947 0.214465305741677 -1.64723836880466 0.323090321170223 -0.500042668227835 0.130817592144308 0.0855592536937446 -1.48662677606865 0.252797606441262 0.38195654248334 1.01158827084018
[+] Show/hide bicluster #78 motif PSSM #1. bicluster 78 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0.25 0 0.75 0
2 0 0.5 0 0.5
3 0.5 0.5 0 0
4 1 0 0 0
5 0 1 0 0
6 0.5 0 0 0.5
7 0.25 0.25 0.125 0.375
8 0.125 0.25 0.125 0.5
9 0.375 0.375 0 0.25
10 0 0 0.875 0.125
11 0.125 0.125 0 0.75
12 0.125 0.875 0 0
13 0.625 0.25 0 0.125
14 0.125 0.875 0 0
15 0.625 0 0.125 0.25
16 0 0.75 0 0.25
17 0.125 0.625 0.125 0.125
18 0.75 0 0.125 0.125
19 0.25 0 0.75 0
20 0 0.125 0.125 0.75
21 0 0.75 0 0.25
22 0.875 0 0 0.125
23 0 0.875 0 0.125
24 0.875 0 0 0.125 [+] Show/hide bicluster #78 motif PSSM #2. bicluster 78 motif PSSM #2 Mycobacterium tuberculosis H37Rv 9x4
POSITION A C G T
1 0 0 0 1
2 0.5 0 0 0.5
3 0 0 0 1
4 0 0 1 0
5 1 0 0 0
6 1 0 0 0
7 1 0 0 0
8 0 0 0 1
9 0 0 0 1 |