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[+] Show/hide bicluster #75 rows and columns.
bicluster 75
Mycobacterium tuberculosis H37Rv
19x35
[+] Show/hide bicluster #75 rows (genes).
bicluster 75 genes
Mycobacterium tuberculosis H37Rv
19
[+] Show/hide bicluster #75 rows (short gene names).
bicluster 75 short names
Mycobacterium tuberculosis H37Rv
19
short_name
[+] Show/hide bicluster #75 rows (long gene names).
bicluster 75 long names
Mycobacterium tuberculosis H37Rv
19
long_name
[+] Show/hide bicluster #75 rows (NCBI RefSeq gene IDs).
bicluster 75 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
34
[+] Show/hide bicluster #75 gene upstream sequences.
bicluster 75 upstream sequences
Mycobacterium tuberculosis H37Rv
19
upstream
[+] Show/hide bicluster #75 columns (arrays; conditions).
bicluster 75 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #75 ratios.
bicluster 75 ratios
Mycobacterium tuberculosis H37Rv
19x35
GENES Ascididemin_Natural_product Cephalexin Cerulenin Deferoxamine Dipyridyl EMB Eta GSNO GSNO_CFZ GSNO_KCN H2O2 INH Levo menadione Min_med__succinate_ Nam Novobiocin NRP_1 Oflox PA_1 PA_21 PA824 pH4_8 pH5_2 pH5_6 PZA Rif Rifp TLM Valinomycin X_109 X_111895 X_121940 X_59 X5CL_PZA
Rv0282 2.03666657254154 0.037984653527119 0.341934680101931 1.39387985987567 2.39907649827660 0.218311935874547 -0.0240583866550748 0.541875705368714 2.34600376562259 0.872540608593853 0.233661752572751 0.337683857403076 0.401375086160099 -0.201768991415465 -1.01670963632047 -0.537056535222881 2.36996274621157 -0.339578399481844 0.184779517445034 0.602696932903875 0.250494809885571 -0.227186352249494 -1.30726214252336 -0.851065675808604 -0.708934645956613 0.132438176034132 -0.515238148707097 -0.424463117074633 -0.100928341058567 2.2817457070839 -0.0880042998868171 2.23717672027639 0.57960857215008 0.292743975452651 -0.0958510069373448
Rv0283 1.85877040415773 0.117656362976245 0.355316048684017 0.87426765713915 2.01940632775349 0.209649194819775 0.351086716312670 0.163988877687956 2.14723043886590 0.723570265256495 0.252308345385541 0.382163420826168 0.354833543179125 -0.185233212788069 -0.806745074207624 -0.145204663973437 2.85700166121914 -0.596329895538736 0.350004709265307 0.29090536198646 -0.0906590155217996 0.201539651569412 -0.501024948123242 -0.0749945146381643 -0.429282367906040 -0.120098286300652 0.325649098815589 -0.271161995990488 0.298077878655661 1.69741888157815 0.428066968911492 1.70792094618924 0.578289945630714 0.81727388147861 -0.566490283283043
Rv0285 2.27919006553701 0.388317357753022 0.148445333462759 1.13126634278056 2.12081779591160 0.471068981357376 0.832786642074558 0.325039213065738 2.56404267541740 0.773058333487379 0.308788502665952 1.14473561107002 -0.220618265471098 -1.16462253091817 -1.46703954617481 -0.0346747958460334 2.44623515241971 -1.55619698500526 0.0352845662219131 0.0718444002106884 -0.0966810334102633 -0.26873936503694 -1.19653468648019 -0.507837474644658 -0.650743900021454 0.164513479876361 0.338464177872413 -0.400221586788776 0.587400371449309 -0.589768664858448 0.670793002353188 1.71751184007141 0.511535907603513 0.839277798648232 0.367697206528463
Rv0286 2.49957149968875 0.394042838512922 0.263800572916713 1.45200673001213 2.59861974194339 0.52532904257949 0.216933975260191 0.739462627554631 2.69139579392337 0.392906021509352 0.442878689090814 0.413277416109099 -1.03764447978164 -1.16413396138650 -1.71183253111065 0.203921373511120 2.09927395846349 -1.27778297559562 0.59405320581597 0.411544644199118 0.444706932240368 -0.410801523493985 -0.906056870299083 -0.848273372173016 -0.267257162215594 0.238498189761114 -0.331334664124591 -0.128305868295019 0.328624606986582 -0.559250797701213 0.208408248854584 1.55647751527917 0.334538980673418 0.664043188604103 0.335818913747606
Rv0450c 0.605126604086715 -0.348983221111086 0.0849733029036752 0.29421148727312 0.999963146097353 -0.440058984578032 -0.49529700250883 -0.0347412374763081 2.82973548842753 1.88694662265847 0 -0.785971088618677 -0.739952609828824 -0.283258318770498 -0.0046587944647042 0.293836778626972 0.0101080589710635 -1.57632006354795 -0.658474401648826 0.182631766739518 0.535136179716436 0.0773743459390665 0.348294074722159 0.19674710182092 0.414747698273516 0.168693515913843 -0.680511618818599 0.0568954076371083 0.409440181285602 -0.546806103313247 -0.154006682570103 0.706756860522124 -0.350493570279922 0.111815808752077 0.38726682252934
Rv0451c 1.67084188118995 -0.210421009158408 0.773631341490376 0.902753554281889 1.58515116248229 -0.102332923557310 -0.28450433298198 0.468321933132322 3.02216048044617 1.32399110231959 -0.0779179987333264 -0.393201867492990 -0.633008363060333 -0.00311739481262329 0.0735105653194836 0 0.300000067304213 -1.22189298129137 -0.62615194971234 0.501110110061326 0.570487892509416 -0.849440139790823 -0.629160017517639 -0.60442352308436 -0.303376643870868 -0.107666137477197 -0.0398186307962869 -0.542760323421514 0.625390340484237 1.90432153658266 0.516576655277716 1.39327914507537 -0.108942297193489 0.558148539463066 0.411374058459856
Rv1461 1.82972469053730 -0.519559477272554 -0.159739311089071 0.0664005868257365 1.87153545377452 -0.0298328876400407 0.196085375967898 -0.134250946399325 2.03207324896750 1.30287791998273 0.842796825020025 0.196085375967898 0.196085375967898 0.510657051828199 -0.707747908918869 0.283521704789737 -0.279440751501438 -0.555504413958467 0.196085375967898 -0.142582394803714 -0.327960844844357 0.122248265963122 -0.241138750338272 -0.23672580611856 -0.106916254776495 0.925827108866261 -1.30167672045426 -0.411330861141593 0.196085375967898 -0.0319334485325132 -0.584856578952265 1.76176633664962 0.79783543593686 -0.230538367045367 -0.0398212448387327
Rv1463 2.22349995303191 -0.0602186341130515 -0.0375388192166886 0.265490108574713 2.12503971410786 0.0526917301116145 -0.166526336869095 -0.0876187991698833 2.02365890002289 1.8627201585345 0.141775631809520 -0.35768906086914 -0.518129924914791 0.288109735637797 -0.375611987370481 0.162812022050946 0.0904889370135126 0.0257119801747411 -0.443661322970341 0.140775133162554 0.136242423585019 -0.0227297944475832 -0.384641093713594 -0.234423032698918 -0.0800322965977443 0.113547672464243 0.0697990143821162 -0.0858043726902461 -0.120397607690848 -0.201087337427086 -0.0182588476954165 1.86486075668091 0.841138051506315 0.248329377397525 -0.0147183900548579
Rv1464 2.77997412578381 0.0970006674898118 0.00613871388251751 0.675770453600204 2.4849200941313 -0.238077786886846 -0.128539980051522 0.298621389037418 0.0962980544086947 0.811067521181216 0.777044137370538 -0.00271273824610032 -0.982663254643354 -0.21167066563787 -1.23776399732913 0.185863948585577 0.0962980544086947 -0.604230418978345 -0.764697840966441 0.345973060370226 0.116866126915826 0.556057055801717 -0.628571402863675 -0.829150736856259 -0.426476944150768 0.699166316239055 -1.17105019077515 -0.548420806685946 -0.156629026209161 -0.99745933641911 0.0263948097076002 2.52280811561803 1.21228830398975 0.208241222684352 -0.190691967734106
Rv1465 2.63025371761743 0.651575739376126 -0.204144201207294 0.455561979865078 2.60483709144602 0.0761824231806627 0.0262438212353661 -0.639133781723565 1.37287679030705 0.247435280687439 1.29356213410543 0.0894200908014641 -0.84200848903749 -1.49830258830132 -0.558514305565498 0.61310044309106 0.278967079677211 -2.56963406455375 -0.65246472585188 0.184687082718699 -0.35962793232498 -0.225443382619282 -0.174656851610707 0.122838669280645 -0.0313610216343917 0.713819599066266 0.731852291801525 -0.246883254210401 -0.0351274754256357 -0.89432470636587 -0.0229663490776965 2.47126104247811 1.27662860461627 -0.157245651474599 0.328729870071357
Rv1466 3.38669616646232 -0.153508871518096 -0.0115773882714507 0.458840057741263 2.80855854362043 -0.0358806950838227 0.361005483789909 -0.255543111764330 -0.142957352426771 0.412490689062784 1.15224275765539 0.70113413975059 0 -0.110629003207181 -0.895840277063227 0.439019393459019 0.260884806681188 -0.623301346361284 -1.03484000655719 0.488988376076784 0.337387846418078 0.500230100670088 -0.348334434918385 0.158136519530364 -0.383610183468811 0.584609489576176 -0.133338551992826 -0.616932365581843 0.427884364284558 -0.383634583511667 0.159189667150262 2.98367334638323 1.19963640508344 0.272736358303293 -0.260700905719717
Rv2377c 2.67347323972201 0.0439520560723187 0.129447864448213 1.68766335844798 2.97307442103951 -0.122030739898019 0.328076854052029 0.904379851168633 3.52840264408264 1.60113254976082 0.134876958216610 0.138293045306710 -0.0121631996201829 -0.968951307073993 -0.940717360553946 -0.242195089806884 0.241516867168325 -0.701207843352227 -0.0913346623839587 0.356766345290547 0.350040445119316 -0.33403552359111 -0.870288971953893 -0.624633590938804 -0.834190269963812 -0.225183243609970 -0.408530580101767 0 0.313253129694066 -0.146790501830151 -0.0314232113665626 2.18469633567013 0.498146279857773 0.00497237852344005 0.0560157559431406
Rv2379c 2.10163795438588 -0.289787088343906 0.178022684717266 1.21837882434314 2.38109050746317 0.194671425067210 0 1.08122541359639 2.47267599276100 2.19038610187989 0.107329410641805 -0.0568216048655064 -0.0352945739031898 -0.145940446406626 -0.85707649623912 0.0812300117518934 -0.0138829187151808 -0.328664612320071 0.00615164218417322 -0.129800848176723 -0.33400763970138 0.779197553776704 -0.705135784287556 -0.887142494337654 -0.85429582623674 0.189453611166811 0.324220315133463 0.080471014938119 0.045613773201227 0.623828518384477 0.295235905754091 2.00927916863243 0.708113559331444 0.467305480428604 0.277021875502587
Rv2380c 2.64003246773641 -0.180567084320295 0.168237439779108 1.48094548758807 2.74225836492266 -0.084871723330661 0.0267398933110777 0.401510807958856 2.76833776769907 2.10590596038284 0.495885496568001 0.0181116279061187 -0.276832544914972 -0.641003723865097 -1.69385202487340 -0.0315753403511675 0.328552214693574 -0.263848188950021 -0.169066018639232 0.213166780624636 0.00647755566136329 0.553456107484022 -0.627374583205146 -0.558199670907842 -0.676318515666898 -0.00403819491806933 0.0313235828474114 -0.166479573878015 -0.0328205610989361 1.49347477404804 -0.169885773970648 2.15805159175885 1.13626215841392 -0.122960568126974 0.309324650727510
Rv2381c 2.27015664161563 -0.0887241732831568 0.0930385001492311 1.38293534649341 2.55092249489980 -0.0493091793922692 0.167447264155529 0.749675479982888 2.98622227930073 1.93492070285317 0.911529927503566 0.05663537413034 -0.0230627566844685 -0.574301366725944 -0.451603234187733 0.00859703109993252 0.357129004473325 -0.293114086196598 -0.0149202801863312 0.218262738051673 0.218706064794236 -0.199984884929697 -0.464804122791474 -0.572361968237487 -0.514727382943331 0.294384372192337 -0.274716596750802 0.00330449968621653 0.185544272239072 1.70923013090698 0.149419308479673 2.04115845319352 0.985819512848653 -0.000175173535055831 0.262265209223436
Rv2382c 2.44338185934113 -0.144590431526681 -0.0121353103922189 1.37369832650497 2.65466175781984 -0.296500031183640 0.167184420031796 0.360437237991118 3.01365234259964 2.25282066023645 1.02821089418717 0.082279102372987 -0.116399737724948 0.112281058897510 -0.422600220952855 -0.119022870289879 0.384649272632906 0.141943021451310 -0.0536335526705609 0.463294896800337 -0.0865112457458222 0.12609416011739 -0.55320930750559 -0.586451923083359 -0.629211551959077 0.219963848108022 0.242496232273902 -0.228077403846041 0.0942698802485765 1.51722023072910 -0.195467299804087 2.13171217276896 1.26878618686588 0.111257255605616 -0.189278282576588
Rv2383c 2.61314175427479 -0.258057125326385 0.227252846336554 1.51604110380721 2.93616351342099 -0.160618079957727 0.394929775449175 0.401979511255431 2.36665583601648 2.15120627253716 0.688513486523435 0.232427526289906 -0.0279518865749887 -0.315288340691511 -0.81919817392983 -0.178339798094149 0.113338732054858 0.162720095298497 -0.132857346828326 0.144001909424689 0.142114947130016 0.204953573241561 -0.807702226100769 -0.786300347612269 -0.842908204082249 0.400479628310342 0.175561767498509 -0.0194129622444940 0.111683849582680 1.91713824669220 0.00586374712067606 2.15371243736239 0.913652718620195 0 -0.170334945437237
Rv3402c 2.78780789277363 -0.0995058300493525 0.34850509255767 2.10787952253896 2.89333831082421 -0.126875949736015 -0.290972412476874 1.10087457181069 3.32711414816504 0.47823557110935 0.163991026906659 0.00868293819683572 -0.0675785428993889 -0.190507503676186 -0.532805628456562 0.42689839135994 -0.745902085054447 0.0524161933788515 -0.0368055408687238 -0.208639703152899 -0.235882558161807 -0.707758682929697 -0.348512225007982 -0.639911915522821 -0.070571752550188 0.210736895527623 0.103525441334453 0.237392871518798 0.0136421307878103 1.64695402032985 -0.148980570592087 2.41600194133955 1.45022824198586 -0.112749845902275 0.0378934497128903
Rv3839 3.26194822616668 0.058883286263475 -0.00962724062013607 1.71297443950223 3.14978730778868 0.127371204776540 -0.203415035280271 0.646208154498468 3.59988508555025 1.42882400853365 0.74946823494956 0.000823713870441042 0.083118193676078 -0.131633880733093 -0.138569158690477 -0.099849768266764 -0.165680424363420 0.583021775492052 0.146814022270351 -8.42806827752296e-05 -0.190586014453391 0.198588795947669 -0.269938817175081 -0.358518252132873 -0.370729841466825 0.23540992601926 0.317969072044409 0.00707454825207871 -0.112467300247013 1.56659330109744 -0.0599453883365361 3.01602792404635 1.71395513734001 0.0824388706395732 -0.162817119732482
[+] Show/hide bicluster #75 motif PSSM #1. bicluster 75 motif PSSM #1 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 0.285714 0 0 0.714286
2 0 0 0.285714 0.714286
3 0.571429 0 0 0.428571
4 0.285714 0 0.714286 0
5 0 0.714286 0.142857 0.142857
6 0.142857 0 0 0.857143
7 0.142857 0.142857 0 0.714286
8 0.857143 0 0.142857 0
9 0 0 0.857143 0.142857
10 0 0 0.857143 0.142857
11 0 1 0 0
12 0.142857 0 0.285714 0.571429
13 0.571429 0 0.285714 0.142857
14 0.285714 0.285714 0.142857 0.285714
15 0 0.571429 0.428571 0
16 0 0.714286 0 0.285714
17 0.142857 0.142857 0 0.714286
18 0.714286 0.142857 0 0.142857
19 1 0 0 0 [+] Show/hide bicluster #75 motif PSSM #2. bicluster 75 motif PSSM #2 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 0 0 1 0
2 0 0 0 1
3 0 0.8 0 0.2
4 0 0.2 0.8 0
5 0 0 1 0
6 0 0.4 0.6 0
7 0.8 0 0 0.2
8 0 0.6 0.2 0.2
9 0.4 0 0 0.6
10 0 0 1 0
11 0 0.2 0.6 0.2
12 0 0 0.6 0.4
13 0.2 0 0 0.8
14 0 0.8 0.2 0
15 0 0.2 0.8 0
16 0 0 0.8 0.2
17 0 0.8 0 0.2
18 0.6 0 0.4 0
19 0 0 1 0 |