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[+] Show/hide bicluster #73 rows and columns.
bicluster 73
Mycobacterium tuberculosis H37Rv
13x34
[+] Show/hide bicluster #73 rows (genes).
bicluster 73 genes
Mycobacterium tuberculosis H37Rv
13
[+] Show/hide bicluster #73 rows (short gene names).
bicluster 73 short names
Mycobacterium tuberculosis H37Rv
13
short_name
[+] Show/hide bicluster #73 rows (long gene names).
bicluster 73 long names
Mycobacterium tuberculosis H37Rv
13
long_name
[+] Show/hide bicluster #73 rows (NCBI RefSeq gene IDs).
bicluster 73 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
24
[+] Show/hide bicluster #73 gene upstream sequences.
bicluster 73 upstream sequences
Mycobacterium tuberculosis H37Rv
12
upstream
[+] Show/hide bicluster #73 columns (arrays; conditions).
bicluster 73 arrays
Mycobacterium tuberculosis H37Rv
34
[+] Show/hide bicluster #73 ratios.
bicluster 73 ratios
Mycobacterium tuberculosis H37Rv
13x34
GENES Ascididemin_Natural_product BZA Cephalexin Cerulenin Clofazimine CPZ Dipyridyl Eta GSNO_CFZ GSNO_CPZ GSNO_KCN GSNO_menadione INH Levo Nam NaN3 Nigericin NRP_1 Oflox Palmitate pH4_8 pH5_2 pH5_6 PZA Rif Rifp TRC Verapamil X_109 X_111891 X_111895 X_121940 X_59 X5CL_PZA
ORF08307 -0.158795251580704 -0.756856827916896 0.204193911996002 1.19349204723143 -0.370746147572645 -0.547604726757413 0.0597307718759454 0.443224886656587 0.00538761524015496 -0.709645377204138 -1.00670046243400 -0.312335454972276 0.409473402596629 0.649543147747967 -0.514779956221745 -0.415011193220495 -0.0147082334041835 0.274558410883465 0.211379650961636 0.192794848206261 -0.314197100502316 -0.173910358163307 -0.197578967961284 -0.599505189557004 -0.708958843382613 0.410655017963493 -1.70021934861212 -0.201978336089400 0.271228376661734 0.294325448031285 -0.266646764957549 1.05152085849122 0.290383271970703 -0.817373645588442
Rv0646c 0.146987213513640 0.44256620907379 0.156650105463535 0.660796287384073 -0.651172047496096 -0.475574495964771 -0.059040606070613 1.06941389081753 0.315302297429898 -0.62447782347014 -0.293711451159894 0.224056337798870 0.731071729279943 -0.246240014434697 -0.209922743222696 -0.709958236400603 0.400898553665399 -0.416746065178511 0.0524421604683355 0.226934484104601 -0.427365476390707 -0.315989398104551 0.0793012329399903 -0.151489660114840 -0.89831129422839 -0.88759047566419 -1.19229130885124 0.688001298791657 -0.0965530412928733 0.0407739457467083 -0.60077260419982 -0.135841327694664 0.179666768323896 -0.112819123029966
Rv1080c 0.39667511421044 -0.532880307656276 0.0415068067415223 0.811092363635408 -0.537196389924967 -0.397812214437789 0.165046544554722 0.497718271326782 -0.477143050474004 -0.689248255230548 -0.948105623560121 -0.426393416136094 0.365413724579700 0.350944998388732 -0.287653696981291 -0.977657055218855 0.142101616390594 0.430453540115259 0.365704512865203 -0.497206405451125 -0.115431760076459 -0.192247654859725 -0.094048840614117 -0.123018403348226 -0.481038592311798 -1.09205516078172 -0.898580053323553 0.282455879437176 0.656445096182992 0.300236964568225 0.221888336360409 0.612242592742939 0.625132065683843 0.0133112270168946
Rv1360 -0.201644521503084 -0.410509233965452 0.373800629166517 0.826786231559586 -0.0386462224326704 -0.0854377862639579 0.605240454984791 -0.0438545587004147 -0.112323079999495 -0.253977405108878 -0.384222704696146 -0.378194027090813 0.229400326215107 0.4986111159607 -0.0705135576439747 -0.534248998833631 -0.0122382513750107 -0.0116906867103918 -0.52905288872893 0.841696352361537 -0.235600405948030 0.137673729414235 0.227943379032829 -0.417673463300625 -0.245593268113248 -0.451906125615448 -0.999834252876404 0.76113816611019 0.264340245771914 0.923117690409142 0.0453140164576338 0.488101360209276 0.19687753593806 0
Rv1511 0.0282109810114024 -0.61856966399966 -0.247233233041883 0.813823886384105 0.120920723052982 -0.33408923547708 -0.258887562450571 0.111055661172099 -0.707028967337103 -0.66299593402408 -0.0858872762334826 0.0850683371296253 0.157269980730656 0.335339443389494 -0.7097138814466 -0.363774315365462 0.0989692466052116 -0.296769395762837 0.481723767358182 0.0137657274170711 -0.333488803784011 -0.213386930580658 0.180222733961565 -0.197672843240463 -0.28015001585357 -0.974779832694896 -1.18809081663559 0.127348747217608 -0.109240893058386 0.260247289654129 -0.132016164257689 -0.241598018261748 -0.312671043243094 -0.57782179798075
Rv1643 -0.250512451627517 -0.636692734707328 0.248386977565096 0.215754740365181 -0.223646764453660 0.0283851296297452 0.219400101094803 0 -0.238672226014702 -0.0611448019569182 -0.952933779136329 -0.495481358011749 0.286171939684376 0.143658104379215 -0.54191024839874 -1.47115064922505 0.0377185541336411 0.608758111346076 0.0839370831692426 0.0585477852767867 -0.311794031064310 -0.0330668428441975 -0.0477646851823972 -0.631666354189131 -1.83771723136380 -0.158207512704545 -1.31892996826047 0.62367805612937 0.287040831997107 0.636731409992012 -0.177014979746884 0.0629703531042358 0.212182693769121 -0.312935839314732
Rv2421c 0.178155474125039 -0.847945879900003 0.0277004418921535 0.911845656964658 -0.339942410053823 -0.0729938718174142 0 0.692655568721035 0.0444512402573894 -0.599350400906309 -1.69691494986085 -0.446389979208302 0.723071765630599 0.57336668859841 -0.779203378269543 -1.33873030627645 0.0687615968515181 0.439378612427998 0.981837607698806 -0.461658510896432 -0.544247826503332 -0.422916584385195 -0.574069146902447 -0.567061110697214 -1.25979353121227 -0.540604265172754 -0.387824179120966 0.124184429821073 0.240114311533289 0.0241393114394121 0.139547132065550 0.615257222882983 0.39607718451566 -0.733948089757048
Rv2441c -0.145401314323398 -0.9608275766194 0.0183881812152116 0.393596582354352 -0.628214827082041 -0.400240924833806 0.202678047004917 0.0870188613755925 -0.183255600532307 -0.665306103119777 -0.928816759406398 0.320833846797269 0.201491761157344 0.401135496072363 -0.526763021915945 -0.798433209198054 -0.0406968862985238 -0.316091088161003 0.346876892916003 -0.079915186636332 -0.041581096892007 -0.162635803466287 -0.102889561830037 -0.467919635119495 -1.16021843144809 -0.690766346125252 -1.93716896328655 0.198445340457503 -0.0974016701302982 0.355960083379614 -0.12221143087417 0.153325301710531 0.0463447937113705 0
Rv2442c 0.243267470357755 -0.48509670586544 -0.117479712443258 0.380242272214255 -0.592202121457521 -0.608929231468985 0.193128696132334 -0.0528622760796792 -0.230931751163466 -0.665408550026619 -1.45405172342678 0.348533362639816 0.0845024289422966 0.213210435964594 -0.308129425174626 -0.94065370638855 0.334572718157812 -0.288380116448177 -0.0993677355536624 -0.141566872393309 0.173909553119333 0.171897809617991 -0.0643836230745801 -0.412586107678437 -1.46885122055711 -1.05180741996281 -1.70036708065626 0.274801588594533 -0.175591169694215 0.258630994573752 0.0326782931884287 0.400258522502104 0.0579398854080301 -0.073824581092561
Rv2904c 0.0425849436270602 -0.604543668640964 -0.107803146219607 0.713919048352113 -0.644336212329043 -0.53759457105284 -0.0603995817647192 0.59660853983904 -0.633688660785115 -0.747447850383226 -0.607920451648996 0.172075924646392 1.04015400905448 0.338781062900738 -0.109495259807692 -0.658952434424841 0.66228106416049 0.0237281357041464 0.300078659234327 -0.456191612738783 0.0759495327683755 -0.166067426121192 -0.214196584309303 -0.0132690900495377 -0.463250159002046 -0.533262760309662 -1.41128972045424 0.0141594087500724 0.268418887223854 0.103944075067605 -0.101006697943903 0.47229407210235 0.184448780653715 0.332576951823713
Rv3805c -0.0749456592641362 -0.375356201526465 0.519337991157167 0.289486394324854 0.113669269823776 0.113006370634073 0.236515233328006 -0.571876442392288 -0.299977491988619 -0.146290635013391 -0.525077735456055 -0.217214333108439 0.43979850247713 -0.111931466364032 -0.537425969946787 -0.660552713864557 -0.125966329911020 -0.736398855403958 0.331363945550976 0.48428993681892 -1.00631922599197 -0.995295009679556 -0.670024270957403 0.166052084899483 -0.575528314729732 -0.480432370842243 -1.61040257725092 0.580731430999148 0.073526355406874 0.467436152030326 -0.414254664434789 0.0260102895468511 0.438108010218148 -0.03085582608607
Rv3908 0.407760686988631 -0.794947405741722 0.115447556373659 0.677295252463545 -0.239200425808415 -0.236881450932667 0.26484585215898 0.916169606964986 -0.603496139112727 -0.619557384881396 -0.651103417830379 0 0.259257494342744 0.299177074813077 -0.276610134580421 -1.12711928517275 -0.0199877472039343 -1.3060702187947 0.852757441273232 -0.314951083498506 -0.290101503838935 -0.821878804755778 -0.634491068454474 -0.0803128173520656 -0.552244771845041 0.00761179068914631 -1.29634627332723 0.645002515776807 0.818731730631191 0.853823157934633 0.408812289164321 0.592085738416332 0.605953512588183 -0.590766895058984
Rv3924c 0.167796007059811 -0.769774511444145 0.0532129792252828 0.565415769074555 -0.308156826779985 -0.559320889599073 0.327520917085069 0.409188380648736 -0.014105900269388 -0.675331824959443 -1.80288455379190 0.0501547622900825 1.00246964581197 0.0654254597430476 -0.527366523449314 -0.83911170429014 0.330795043228025 -0.00927591434833249 0.493225100694272 -0.482651128761388 -0.154496781908603 -0.0228800693619922 0 -0.452362068552355 -0.477899466488901 -1.00766529281822 -1.53092654992487 0.086612487311222 0.44537737986502 0.159276960218225 -0.000229958728863576 0.601278614111333 0.469855363408292 -0.404805448461265
[+] Show/hide bicluster #73 motif PSSM #1. bicluster 73 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0.181818 0.090909 0 0.727273
2 0.181818 0.272727 0 0.545455
3 0 0.363636 0 0.636364
4 0 0.363636 0.090909 0.545455
5 0 0 1 0
6 0 1 0 0
7 0.545455 0.090909 0 0.363636
8 0 0 1 0
9 0.090909 0.909091 0 0
10 0.363636 0.090909 0 0.545455
11 0 0 0.636364 0.363636 [+] Show/hide bicluster #73 motif PSSM #2. bicluster 73 motif PSSM #2 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 0.454545 0.545455 0 0
2 0.090909 0 0 0.909091
3 0.181818 0 0.727273 0.090909
4 0.272727 0.272727 0.272727 0.181818
5 0 0 0 1
6 0 1 0 0
7 0.545455 0.181818 0.272727 0
8 1 0 0 0 |