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[+] Show/hide bicluster #68 rows and columns.
bicluster 68
Mycobacterium tuberculosis H37Rv
18x37
[+] Show/hide bicluster #68 rows (genes).
bicluster 68 genes
Mycobacterium tuberculosis H37Rv
18
[+] Show/hide bicluster #68 rows (short gene names).
bicluster 68 short names
Mycobacterium tuberculosis H37Rv
18
short_name
[+] Show/hide bicluster #68 rows (long gene names).
bicluster 68 long names
Mycobacterium tuberculosis H37Rv
18
long_name
[+] Show/hide bicluster #68 rows (NCBI RefSeq gene IDs).
bicluster 68 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
32
[+] Show/hide bicluster #68 gene upstream sequences.
bicluster 68 upstream sequences
Mycobacterium tuberculosis H37Rv
17
upstream
[+] Show/hide bicluster #68 columns (arrays; conditions).
bicluster 68 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #68 ratios.
bicluster 68 ratios
Mycobacterium tuberculosis H37Rv
18x37
GENES Amp Cap Cephalexin Cerulenin DNP DTNB Econazole EMB GSNO H2O2 KCN Levo mercaptoethanol methoxatin Min_med__succinate_ NaN3 Nigericin NRP_1 Oflox PA_21 PA824 pH4_8 pH5_2 Procept_6778 PZA Rifp Rox SM starvation Tet TRC Verapamil X_121940 X_241 X_59 X5CL_PZA ZnSO4
ORFD0354 0.312402340230985 0.566412717408186 0.224757572813433 -0.102263335959305 -2.64555681140296 0.268828049285049 0.129813117426686 0.0833131128335534 0.28571549314685 -0.887605052158333 -2.46253978207548 0.155699290040453 0.145618630746613 -0.239416939515518 1.67614149989683 -0.993231210107852 0.404649917100806 -0.873713994415275 0.0341568364970598 -0.0143453877229541 -1.67420742136072 -0.681939575049084 -1.00127858167542 -0.515373974576945 0.263654034923955 -0.589651725539502 0.783028158941878 -0.698585979437711 0.446015772879207 0.456362041054614 -1.66736695589391 0.313091622315999 0.0673803008788984 -0.450844332010994 0.103926206757873 0.367498706689521 0.699017288021516
Rv0237 1.05073031058711 0.588273300207915 1.08152925743439 1.06361662297639 -2.53907886369839 0.441767246426012 0.326120378702777 0.915501684287786 0.424512814571898 0 -1.47020263682499 0.394131101389941 0.310132823202688 -0.0837603150283889 0.11505229842978 -0.686763862624346 0.592792775528585 -0.701131478881725 0.852294599330812 -0.551701782319247 -1.39909489819865 -0.720680587729997 -0.607217367233877 0.203074092911136 0.575980161043651 -0.67167956206615 2.14396439534251 1.00587217514713 -0.0999614327219835 0.380950510133650 -1.70879225956994 0.45873089294339 0.00304439531112729 -0.222801797745780 1.03191808805035 -0.0406810825209617 -0.287128712336188
Rv0332 0.0896103971147036 -0.167782512748720 0.883473731175948 0.783766397738124 -2.00359979963377 0.757232135624153 0.21175865201575 -0.063932394474015 0.461246543055784 -0.130924625968760 -1.63973785201275 0.431528149219352 0.294511063681365 0.713068141864733 -0.433199857998901 -1.18569481894793 0.661655903892819 -0.121192395889314 -0.379493229745523 -0.703280297930239 -1.0971742625754 0 -0.184592096115053 0.138064947690190 -0.0645446514008391 0.132353179665727 0.858356958464042 0.471235585466389 -1.04145891411048 0.163113305555746 -0.587970586272018 0.767136885606462 1.01159271971631 -0.0727456395632974 0.722701356067619 -0.765476336750035 0.413773732665067
Rv0545c 1.01652187666388 -0.493464348320216 0.445778638629288 0.0445802193057554 -2.76935663340623 -0.187144403307564 0.129886243950455 0.401912874698585 0 -0.300844838111846 -1.16943275171433 -0.29804949236005 0.282853806205150 0.162395261815699 1.95886750440864 -0.317979891724058 0.419874128138981 0.372100645037262 0.877092828096346 -1.05149583385497 0.413316581099547 0.321994071523803 -0.531269959620063 0.561408257131179 0.350297112301580 -0.118388416752694 0.547858014058688 0.625668407672181 -0.117198832536875 1.06255127984019 -1.24207275826688 0.551998031446824 0.646255379486849 -0.524643367923316 -0.0929010389000094 0.869340536364664 -0.355398712729032
Rv0646c 0.249274519704154 0.628673425135991 0.156650105463535 0.660796287384073 -3.75748859260881 0.559441392968045 0 0.176482082712688 0.451065541484817 -0.157647121216101 -3.41375334282108 -0.246240014434697 0.492289115626817 1.44177842554507 0.67700513007752 -0.709958236400603 0.400898553665399 -0.416746065178511 0.0524421604683355 -0.0865049673187253 -1.27001304555685 -0.427365476390707 -0.315989398104551 -0.398217213827689 -0.151489660114840 -0.88759047566419 0.44902425236034 0.182089110807096 -0.337648001558369 1.07951421898019 -1.19229130885124 0.688001298791657 -0.135841327694664 -0.690794542823291 0.179666768323896 -0.112819123029966 0.222481474998511
Rv0891c 0.400099674236302 0.641552205510495 -0.0685437954759833 1.12638553677566 -2.06979249691697 0 -0.849704660558975 0.792389360809592 0.175874790229009 0.552432142826015 -1.47698878595108 -0.013643484203853 0.478337378931797 0.0237533887877023 1.28462008694185 -1.11543985887673 1.15852903530798 0.621218911713329 0.350296881961754 -0.464783554341099 -2.46081012138141 0.158170422131588 0.243484265751277 -0.479149799907251 0.353836701383205 0.206538236007665 1.53507320691087 0.0867304990523328 -1.53630486395958 0.151046590950547 -0.97763781300492 -0.416504495776125 0.8233668597829 -0.225319114120713 -0.0977624762202157 0.867112886741423 0.824814089069737
Rv0933 0.447629589365872 -0.341967689800088 0.414706652909311 1.06170150959728 -2.03577103764181 0.496924644728176 -0.649655721682223 0.74694746662885 0.361466437110101 0.199374023128386 -1.79651359508405 0.972409051324294 0.0306715427582914 0.207934363675321 1.07935348439877 -0.126225864025355 0.632805568071032 0.704596096018511 0.69734291296483 -0.308818533951278 -2.58906748320967 -0.182461448937249 -0.430369719080664 -0.280366354081089 0.583811180992259 0.735283206516602 -0.458402012853697 -0.0912398656979682 -0.0346413475281763 -0.671685871340873 -0.454241859368658 0.489511621228755 -0.0202077820899139 0.193013291939652 0.486462101374221 0.199554939751458 0.672847973312422
Rv1589 -0.127434151917435 0.647396549711546 -0.290649896862175 0.202609352571519 -2.96933328846716 0.470560083546904 -0.371358903424999 0 0.276303091902999 0.705394681333901 -1.44091030392683 1.10582095600919 0.848537054160092 0.7944466061955 -0.34512680056179 -0.381682062554074 0.989149895674149 0.900767738136521 1.80581368160841 -0.52888941740587 -2.17227236606665 -0.371397467795044 -0.0751847511502011 0.41941983716061 0.964197085401837 0.0126574639990653 0.364012635147699 1.14159689388232 -0.523061384709193 -0.158108447467113 -1.25762214918510 0.210276381775270 0.435180925155741 -0.534540189016235 0.340150953300901 0.111361401418994 0.0215604958672774
Rv1611 0.470704991905326 -0.104398850541597 0.184801145606677 0.196769598994067 -1.71906139463525 0.174309240115479 -0.231660989000191 0.879018500974774 0.299114476256748 0.369825969632217 -2.07447109464471 0.164540999105858 -0.101530704620473 -0.0122107336603491 0.216654536890105 -0.32435226105977 0.128371280779451 0.260334083094248 0.93262004385671 0.299252712526233 -0.981417811679806 0.127135653072419 0.668852200522623 0.103661957138739 -0.121316598325519 0.338634355406624 -0.587942573738692 0.441571869325538 0.190270388003823 0.191394278206805 -0.875073280620125 -0.217793621516001 -0.49480708868111 0.131890526498772 -0.0127781281241453 -0.0851536250518695 0.673282911816799
Rv1826 0.510170676602188 0.651803194331031 0.239831791356126 0.348440322006045 -3.51072872975713 0.231082311106273 -0.132965022840729 0.198289970769924 0.310033893540062 -0.5523218040398 -2.70519534993463 -0.302647527448394 0.452214646077338 0.234846298054441 1.31411896461822 -1.19934856730495 0.918891825209715 1.01423736902727 -0.623455922644819 0.0995610527998818 -1.55981777857256 0.429348476998304 0.30095251600698 -0.0151877140355691 -0.215805946605131 -0.668603335176377 0.585763328327667 0.245710768788468 -0.00145716569381535 0.0073755988816745 -1.62151342901104 0.450084499195074 1.41322509952118 -0.599703756488387 -0.356903219164524 -0.216266488251637 0.211465558071698
Rv2113 -0.054775455344979 0.528449928125522 0.105142356901023 1.31439959776832 -1.08461363672883 0.676249204087849 -1.01148200583003 1.32711837446077 0.38214610075463 -0.183687454597665 -2.18813230240493 0.836272745580333 0.0321067914601514 0.377330968600366 -0.0276947298067210 -0.887830689878694 0.77205834474005 1.22241365361490 0.353201697421011 0 -1.9364962536583 -0.62441584530604 -0.124732417682833 -0.589111656882652 0.324080141694762 0.143623962003409 -0.88786648871208 0.135446957671235 0.405740237024860 -0.291824049006255 -0.818274229098123 0.224519783828975 0.248568019266340 -0.088254488491559 0.575878621437846 1.18203701168838 -0.152281705493879
Rv2114 0.0924072026067146 0.074559673548491 -0.345531445950764 0.470469724834256 -3.30126955020639 0.236704146589538 -0.636021399751818 0.223823332496259 0.544421115084156 0.116321031538962 -3.23368100539249 0.178343684393157 0.0790060117830207 0.700293092811222 0.976599002098686 -1.05499310770002 0.662656494618996 0.587983468402507 0.0284386974025684 -0.253387971231261 -2.24447020616975 0 0.0442456339791589 -0.697303800011767 0.199051183030437 0.0150316968736334 -0.156237748790929 0.0590977905041337 0.137096012766555 0.314230837627494 -0.953589338206812 -0.00992637850243607 -0.00832739624044209 -0.47913523466854 -0.138714458563942 0.421466023066636 0.735189214173475
Rv2190c 0.519027736731491 -0.206094122530075 0.00473134732341877 -1.05710511371663 -2.9477019405104 -0.277395156245804 0.0615914860679172 0.092670414736487 0.629963410127583 -0.0681183207036825 -2.10949520507795 1.10450061061526 0.603884179173493 0.543738482240451 0.543871560949552 -0.492579760128071 1.31549773002908 0.23395136962863 1.23208546913767 0.095389197246141 -1.35778009341895 -0.630351441202524 -0.216954692703546 -0.123243910639935 0.210224017721439 -0.0136646618968209 -0.533892173744698 1.35736420388033 -0.102672056761686 0.648115430729127 -0.73411937107663 0.447770003896068 0 -0.96949283053996 -0.854486938072838 0.507950713545561 0.242297474663451
Rv2213 0.228966746508089 0.546113992848994 0.330160440438551 0.956291929202786 -3.50747907679894 0.483135065219247 -0.268764885757466 0.234326631401702 1.03710666989658 -0.178771893268261 -2.35524252170501 0.208412609189604 0.0951974818533905 0.256649039984503 -0.961436285572781 -0.651291762818741 0.803206624969784 -0.103031167031386 0.711221142341811 0.0967620441154633 -0.884678279798075 -0.678004515014964 -0.347893888210398 -0.249758270526768 0.160040021511955 -0.226355942624221 0.337046664545989 0.937999542546432 -1.44541262369035 -0.526919649243991 -1.15960073124080 -0.0604907653729242 -0.118630372088511 -0.339872571294247 0.315511544917521 0.162528994822171 1.0835721431723
Rv2239c 0.94671690130014 -0.405052037163380 0.155746214676062 0.287778333916758 -2.81311077395722 0.160326593135134 -0.214167076210016 0.378787480213209 0.191928884655267 -0.457524887392317 -2.24503919728359 -0.2766520458082 -0.172578877031724 -0.189019363028196 1.27172598182954 0 1.12826334352958 0.24996816529334 1.11597442347667 0.252077548212429 -1.73203635934974 0.492765414951109 0.010524862197166 -0.087395367119198 0.674249433029572 -0.650657842693236 0.0221425975541695 0.830269219198974 -0.436001911307284 -0.0513185586065238 -1.27180898685757 0.053246335641839 0.0670172154020826 -0.734534201451728 -0.540537609961975 1.20232344201077 0.414141006052652
Rv2523c 0.3498782576926 0.071867108352035 0.395781101134546 -0.521227565205162 -3.08892088401937 0.206604365009061 0.436514808345767 -0.0861050041163408 0.659498084869462 0.186784809453674 -2.86317539464662 -0.124424612513635 -0.0656597666759356 0.68897270334223 0.0538379614584429 0.257396890105277 -0.222773121605766 0.059749170617914 0.0948833522843905 -0.0900735070524197 -2.03992105822345 -0.335473781248208 -0.23800571632362 0.0622983403105308 0.00918987812016297 -0.201407201122190 0.82524475729512 0.676632298980773 -0.188522016039575 1.14015639970587 -0.582018149042334 -0.182340744159742 -0.45639588292968 -0.691645935185848 0.546800313465525 0.100606456725218 1.27636248145875
Rv2563 0.591481173982807 1.01651920172074 0.326287676275499 0.281706449053217 -2.62516149820334 0.45808439267249 -1.23057582691944 0.423260484121854 0.305320231697395 -0.537964291093106 -3.17133563095314 0.281175776856158 0.597545886889905 0.586710153047056 0.137132868522538 -0.686016981953069 0.752598411222894 0.567254782902295 0.434872812328424 -0.442150851797612 -2.33179485862549 0.0428258552174366 -0.68258992391276 -0.310119985732285 0.138088957487543 -0.516319078085847 1.28406344546402 1.10509477988826 0.378501053869639 -0.174255315918873 -1.46047456304981 0.632776115715187 -0.0282037545114366 -0.56391971986767 -0.0354767978684742 0.0717475619535087 0.573912921574947
Rv3840 0.135209144690354 0.173002514815753 -0.0493953187728663 0.0560159002601073 -1.54181542326561 0.391431697407007 -0.0666574195851749 0.0572340070726197 0.936262574315801 0.635481893112091 -1.10304594933970 -0.121115231765436 -0.0225723249604961 0.213779805384141 2.29988058897020 0.172597169365147 0.620587059346483 0.668045437236318 0.346657445315111 -0.449994042572131 -0.755281580714257 -0.223492516752734 -0.344800110444076 -0.628647279825663 -0.0040695450451037 -0.560709525767349 0.0677350457580848 -0.0321949060681393 0 -0.131604174976048 -0.581524184941262 0.521175925126618 1.63402638811739 -0.451645405736388 -0.206540588977231 -0.148272320380712 0.172597169365147
[+] Show/hide bicluster #68 motif PSSM #1. bicluster 68 motif PSSM #1 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 0.75 0 0 0.25
2 0 1 0 0
3 0.5 0.5 0 0
4 0.25 0 0.5 0.25
5 0 0.5 0.25 0.25
6 0 0 1 0
7 1 0 0 0
8 0.75 0.25 0 0
9 0.25 0 0.75 0
10 0 0 0 1
11 0 0.25 0.25 0.5
12 0 0 1 0
13 0 0 0.5 0.5
14 0.25 0.5 0 0.25
15 0 0 1 0
16 0.75 0 0.25 0
17 1 0 0 0
18 1 0 0 0
19 0 0 0 1 [+] Show/hide bicluster #68 motif PSSM #2. bicluster 68 motif PSSM #2 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0.375 0 0.125 0.5
2 0 0 1 0
3 1 0 0 0
4 1 0 0 0
5 0.375 0.5 0 0.125
6 0.75 0 0 0.25
7 0 0.5 0 0.5
8 0 0.875 0.125 0
9 0 0 1 0
10 0.25 0.5 0.125 0.125
11 0.375 0 0 0.625 |