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[+] Show/hide bicluster #63 rows and columns.
bicluster 63
Mycobacterium tuberculosis H37Rv
20x35
[+] Show/hide bicluster #63 rows (genes).
bicluster 63 genes
Mycobacterium tuberculosis H37Rv
20
[+] Show/hide bicluster #63 rows (short gene names).
bicluster 63 short names
Mycobacterium tuberculosis H37Rv
20
short_name
[+] Show/hide bicluster #63 rows (long gene names).
bicluster 63 long names
Mycobacterium tuberculosis H37Rv
20
long_name
[+] Show/hide bicluster #63 rows (NCBI RefSeq gene IDs).
bicluster 63 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #63 gene upstream sequences.
bicluster 63 upstream sequences
Mycobacterium tuberculosis H37Rv
20
upstream
[+] Show/hide bicluster #63 columns (arrays; conditions).
bicluster 63 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #63 ratios.
bicluster 63 ratios
Mycobacterium tuberculosis H37Rv
20x35
GENES Amikacin Amp Antimycin ARP4 BZA Cap Cephalexin Clotrimazole DNP DTNB EMB H2O2 Levo Min_med__succinate_ Mtm Novobiocin Oflox PA_1 PA_21 pH4_8 pH5_6 Procept_6776 Rif Rifp Rox SM starvation Tet TLM TRC X_109 X_111891 X_124196 X_59 X5CL_PZA
Rv0016c -1.63209735983250 0.184479365576446 0.279239854879094 -0.261797067463922 -0.222375205091935 -2.42400950810254 -0.00701054772351051 0.88353947287178 0.093629074794486 1.05256752278757 0.293066537676563 0 -0.596065480448614 -1.04912355826494 0.189493661212017 0.338327191385723 -0.872448175969334 0.0224381625006773 0.124347907345377 0.0400315833197049 -0.472384821564425 -0.416519075106336 -0.454377286328289 -0.405939121188271 -2.48786856958332 -0.49628258962309 -1.43494307484581 -2.12818259238034 0.0661194077535091 -0.288779981678097 0.375116520775972 0.546539006759732 0.156508936191694 0.579516385744539 0.451287185506273
Rv0018c -2.81043669865664 0.246443572123747 -0.0389484932196469 -0.0276319762185113 -0.196030371382747 -3.20097046652554 0.918319955771349 0.430581257057558 -0.0276319762185113 -0.0718019548754692 -0.0665853833948189 0.0102985742180024 -0.368220039679143 -0.0276319762185113 0.337058390271252 1.4984272031433 0.155702624070281 0.713216015605454 0.527178618713198 -0.155190238703310 0.0534323935245497 0.554081939266283 -0.146537883124328 -0.175810490564227 -3.40193789498284 -0.277634290756876 -0.743341806763221 -2.80562577349539 0.128501307575562 -0.711658975845349 0.42370973302227 0.0909273953723013 0.186406128316646 0.376473530720823 0.331853605863114
Rv0284 -2.02603915750090 0.0531078004473177 -0.137751759976130 0 -0.468766212530643 -2.55956120544383 0.0236968097161937 0.109663417317371 0 0 0.299265779364720 0.241067836050966 -0.147599306256404 0 0.195641601063031 0 -0.163718815343460 0.38878724381226 0.062736308895511 -0.989301941858618 -0.46893608157238 -2.2179982880459 -0.187965372059693 -0.598445977744127 -2.91509908214271 -0.681210969622674 -0.448267937321666 -0.664036927058225 0.320572603217845 -0.531190218884633 0.122508586272299 -0.00807302751515687 0.374848137724726 0.321060421423744 0.115222382105894
Rv0287 -1.94321851245379 0.418921563889716 0.414407974240505 -0.0141591699044162 -0.336564486005957 -2.69780716370351 0.423595044359769 0.0374872764564046 -0.294102707500764 0.450492109624616 0.866231057884138 -0.0131308414459081 -1.14017743205488 -0.751602622678079 0.0768833085154436 1.62687569579669 -0.185943875614437 0.69501207782467 0.525887125100395 -1.06573297138059 -0.293824326488433 -1.07569651199878 0.123281308517487 -0.977898930694274 -2.95091720629589 -0.752929108439777 -0.189678796738112 -2.82252290418996 0.64947650434827 0 0.738667795237326 0.246421151169731 0.575184718780937 0.841481403150209 0.0283490110543359
Rv0288 -2.49397095265177 0.371739490865262 0.291311167907851 -0.111586191662241 -0.519213811078183 -2.97587791147215 0.279523479606226 -0.0618938057839282 -0.525553526709947 0.0655341021100747 0.85810814789218 0.217628048455399 -1.66777944128758 -1.13175122998049 0.263234948082902 1.03925884027699 -0.403885626353064 0.298606134739821 0.160808242712230 -1.28416888557633 -0.507119056510547 -1.00674029755410 -1.07151421892044 -1.29398359904216 -3.26862350988469 -1.34779508038399 -0.616950297145516 -1.97271818944621 0.298300089029387 -0.058684885288547 0.522251216230986 0.101490136233142 0.538337704179058 0.740725402841612 0.301082014764253
Rv0289 -1.50478136603151 0.191947357574010 -0.0803483933755445 0 -0.556334321174987 -2.98441641699953 0.452841646348887 -0.505337212806592 0 0.520172751968104 0.373720760792487 0.233180424939698 -0.976714944603853 0 0.0116284732578834 0 -0.540765506117769 0.66448852544282 0.406665276149942 -1.5799918064821 -0.865456014654469 -1.35403368529228 -0.0445807325421784 -0.396552707787032 -3.03645822868835 -1.31198875071496 0.0998278090296535 -1.98714912001096 -0.0170607036485070 -0.183564748777458 0.358212899415577 0.095312037159478 0.808579593107348 0.994868160367244 -0.119636663158289
Rv0290 -1.90168027066939 0.066958131260487 -0.265836889869153 0 0.142739509607214 -3.16751694603803 0.372586519993687 0 0 1.49841527215056 -0.0249445932900896 0.527186570471667 -0.626549625519014 0 0.42414360892303 0 -1.14308554897403 0.160968626827739 0.109222491983690 -1.16753944593976 -0.87142712795891 -1.01069661912842 -0.370169419451416 -1.13397813612681 -3.35670637872283 -1.00622427379501 -0.806018868925557 -2.92524473902207 -0.232694980796208 -0.282834197386087 0.168795965905827 0.0990964928465 0.441796721334642 0.653405648342905 0.508455738963408
Rv0291 -1.08179340978186 -0.0576293997179557 -0.655480771880943 0 0.533645749515114 -3.29041868883526 0.374301737599292 -1.04175896620333 0 0.498039665450858 -0.0609505268764499 0.518400357222119 -1.18080794410179 0 0.538227005400207 0 -0.440624343353817 -0.0696036891321583 -0.337467573312297 -0.217963336178689 0.288497514986046 -1.35614871162016 0.301425190931277 -0.543289565846332 -4.0010146863439 -0.82468717080607 -1.24056730594971 -1.0641822431651 -0.179504979019069 0.105728632621112 0.0270491004268656 -0.311780508878243 0.385401260706306 0.186156778717783 0.61189753557221
Rv0292 -1.14695454501906 -0.084328259683492 0.521060128371956 -0.0166652878287799 -0.0195103654609157 -2.6896222437129 0.0261880169766455 -0.0166652878287799 -0.0166652878287799 -1.02708409230108 0.144088363529888 0.00391792689090712 -0.515438326239777 -0.0166652878287799 0.0700993163058911 -0.0166652878287799 -1.29336005704112 0.778180182950219 0.744459802277865 -1.61941184108753 -0.814237430946913 -1.01597079001744 0.209151625546539 -0.524066416242274 -1.97049401477323 -1.79971498308601 -0.426382311960028 -2.67442386596474 -0.114910359080058 -0.0220535832690689 0.359075055293795 0.297248107129635 0.668766128068261 0.553314837784974 0.879582602649426
Rv0868c -2.17562750295368 0.546320926881733 -0.0735547368707655 -1.15632679085056 -0.90647885809318 -2.07802398504093 -0.271774427011265 0.0258162972070963 -0.452395492866335 -0.093709096465342 0.314400998330428 -0.438161886289677 -0.537701120290682 0.533449707678915 0.228840581463987 -0.820106252990697 -0.612227204296473 0.128830070888669 0.422727058422055 0.54312368933841 0.636840564076174 -0.583974958103171 -0.462030842903288 -0.702059062710213 -1.52497017140417 -1.19952976949375 -0.0897534472125292 -3.55687040288044 0.188692025345539 0.205115008049253 0.116931564772712 0.227346050425345 0.131047411922702 -0.461948177307099 -0.0329282321178517
Rv1446c -1.98111056129964 -0.0871588158734874 0.0516389462408555 0 0.558901471997499 -2.58220875788068 0.116483689196796 0.438068810359694 0 0.32576599403066 -0.115921502685557 -0.110047204545507 -0.00350851957035497 0 0.417764903229021 0 0.80433842845232 0.166998733890596 0.232292625657988 -0.280599641393834 -0.320584709984436 -0.412967159548165 -1.03348789375661 -1.59153899624895 -2.57228350769671 -1.06012734773708 -0.586104626688278 -2.81525370669742 -0.128700018440944 0.311417086568628 -0.124936906055107 -0.0662702166163871 -0.145558276564135 -0.464840997387731 0.522020726706291
Rv1449c -1.06537114629473 0.168615423788454 0.301824413423286 -0.677441036880378 0.132123823596078 -2.25938611185445 0.0937846860630333 0.0113709125295361 0.423479958045929 -0.200844066563306 0.0749503141612934 -0.798817646110764 -0.0397157230186106 -1.15771006310278 0.837445997574317 0.574444253824989 0.527968420466918 -0.283993743902643 0.00234293973678734 -1.41476959324804 -0.537400014447209 -0.152612647428471 -0.823985263415348 -0.803854410744344 -3.98427432410660 -0.00507335981891525 -1.09302343766838 -3.02493680987097 0.289759397863910 0.82686268714112 0.161758126384712 0.104707313099015 0.333928907477285 0.207849521085317 0.742591849372822
Rv1701 -1.29171588412773 0.0487076957848825 -0.440532538417009 -1.74847506239233 -0.0102655008142040 -3.06200209535604 0.9350299875328 1.19186865088321 0.398977661082623 0.752476569481268 -0.439445937171658 -0.363103194093298 -0.672038335901266 -0.368992716741668 -0.185246022786415 0.652316780430337 -0.578071728889412 0.208397587989471 0.702746448110693 -0.408365971251985 -0.34002357698175 1.40687880410470 0 -0.514987662778228 -3.28541543701587 -0.417068283770401 -0.255559770184274 -1.81316294845754 -0.0336147905266527 0.219011690843758 0.0215945743299005 0.377534229171326 0.230124659969772 0.897138430102734 0.165393422969046
Rv1796 -2.03114226843756 0.475912612615692 0.258183144619143 0 -0.286098598732597 -3.73530543321190 -0.109534513701637 0.533723941060872 0 0 0.326645528031337 -0.0649755451123996 -1.96262831068004 0 0.197836285260462 0 -0.332577664245859 0.392297835775322 0.50583106124634 0.0993134435926895 0.116163657588907 1.08481717902186 -0.48273831170009 -0.716941979057307 -3.73689834391364 -0.737674102781537 -0.138040481290213 -1.62872674017254 -0.0165077149936100 -0.503881919459201 0.224099969794268 0.113130960354906 0.193053094498023 1.06496028813232 0.86339600342269
Rv1821 -1.73095482554150 0.412554638188666 -0.0404682640941839 -0.194558695411723 -0.658252156132645 -2.57678227982397 0.339201457129524 0.591242664617749 -0.181037270330415 0.0578978222326125 0.374263647797842 -0.858598948910796 -0.708145951924827 -0.590664161552345 -0.527311341509486 0.442499537552682 0.384762301409146 0.319970731069756 0.222372316826709 0.0652789092433006 -0.0210137406264340 -0.404875706198779 -0.546182415834599 -0.510968580023274 -3.56362265636533 -0.594008687807043 -0.353565119101135 -3.31572174341605 0.459474489067789 -0.658156190054631 0.191495674775188 -0.126727894967512 0.331066510512275 0.910534927431858 -0.0644969239618568
Rv3017c -1.43669514483484 0.363561837166617 0.378927850714596 0 -0.640180191356249 -2.90856148411891 0.554576952061732 -0.174095295856612 0 0 1.18733800257403 0.262600588459938 -1.56393908967479 0 -0.0277834166236405 0 -0.542437024047168 0.382018997562597 0.234295598429236 -1.55903966042185 -0.728098390048247 -1.85600542228337 -0.485961104304058 -1.16953954092284 -3.18680951445766 -1.74651844705794 0.0746694452282549 -2.09870197091995 0.499145304579223 -0.00332379183030576 0.762477129342002 0.00146249360742909 0.364925314956555 0.934424716289643 -0.137539760236415
Rv3019c -2.21649409572827 0.0992327670763605 0.0248034311030597 0.424524070757994 -0.680641471852413 -3.33124770387055 0.242672992635129 0.214606084758939 -0.183844920042651 0.118762054454483 0.626747647727015 -0.0242277883450653 -1.98710467464212 -0.183844920042651 -0.136320059686066 0.472514647702678 -0.740788124845934 0.0969169658770793 0 -1.55407182964570 -0.793787043881239 -1.72055660048506 -1.04904851780540 -1.50875535060492 -3.5881898127323 -1.71517299392835 -0.0957908987365102 -3.12037328254433 0.0898456944251091 -0.277529314331715 0.276633608252505 -0.141526932041837 0.272746966207538 0.477136086486684 -0.00228743745037732
Rv3020c -2.1690721500354 0.112451462575357 0.157483407974548 0.384219754876724 -0.358809652342016 -2.65707152951464 0.311672439190446 -0.108414396887755 -0.0532459542843985 0.0689771324103169 0.298291715416645 0.235009387104034 -1.20593623027853 -0.623913261539407 0.233763410248232 1.38174955786656 -0.464521489352396 0.435179111628442 0.154929309395741 -1.13881904586901 -0.22715130610293 -1.80940823953592 -0.778604399335 -1.20774196045177 -3.4746249375422 -1.47770366460150 0.0397327844751125 -2.87641760588567 0.473879963333973 -0.288297139052603 0.285086761082383 0 0.373646566689861 0.815240554553794 0.352360451964822
Rv3684 -1.50289780677761 0.0041174780351706 0.356948354131373 -0.998240542368378 -1.22581661219418 -2.60616820622534 0.017941995042493 -0.177753242250089 -0.960299344484498 0.426417359516779 0.172970844746726 0.0201808823051927 0.150650109380461 0 0.196652849861297 -1.59448229101445 -0.570528391309128 0.168777520983942 0.0637975008774897 -0.557785556694859 -0.223184291335375 -0.161200589110863 1.06783244058398 -0.111999155872689 -3.2460698485335 -0.190666475205386 -0.538228793271539 -2.27285690391658 -0.330664304436013 -0.250030531999905 0.705164031218016 0.314966650250117 0.323624487362226 0.606049355854315 -0.861945276523069
Rv3690 -2.62684295686198 0.832627215226197 -0.18511609409757 -0.77025027924318 0.387339972565871 -2.11952146402483 0.382277089508695 0.910373741842783 -0.38742174057288 1.35270793542894 0.556317560788843 -0.274870879341231 -1.05307853188329 1.33063976458526 -0.178956646035174 -0.105900773030749 -0.719326300004952 -0.279700440671124 0.32529632959129 -0.539774735893889 0.0188348475164620 -0.670773808474728 0.456184311762562 -0.918893354443031 -3.40865318637653 -0.661130093258756 -0.17726461731436 -1.55755476814527 -0.6577855706233 -0.0125886175225539 0.141935937846077 0.408723921537966 0.215627491421894 0.529269900351096 -1.30460268275474
[+] Show/hide bicluster #63 motif PSSM #1. bicluster 63 motif PSSM #1 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0 0 0.142857 0.857143
2 0 0.428571 0.571429 0
3 0 0 0.857143 0.142857
4 0.285714 0 0.285714 0.428571
5 0 0 1 0
6 0.142857 0 0.142857 0.714286
7 0.142857 0.857143 0 0
8 0.571429 0 0.285714 0.142857
9 0 0.428571 0.571429 0
10 0 0.285714 0.428571 0.285714
11 0.428571 0 0.285714 0.285714
12 0.142857 0 0 0.857143
13 0 0.428571 0.571429 0
14 1 0 0 0
15 0.285714 0.428571 0 0.285714
16 0 0.142857 0.857143 0
17 0.857143 0 0.142857 0
18 0.142857 0 0 0.857143
19 0 1 0 0
20 0.428571 0 0 0.571429
21 0 0 0.857143 0.142857 [+] Show/hide bicluster #63 motif PSSM #2. bicluster 63 motif PSSM #2 Mycobacterium tuberculosis H37Rv 14x4
POSITION A C G T
1 0 0 0 1
2 0 0 1 0
3 0 0 0 1
4 0 0 1 0
5 0 0 1 0
6 0 1 0 0
7 0 1 0 0
8 0 0 1 0
9 0 0.5 0.5 0
10 0 0.5 0 0.5
11 0 0 1 0
12 1 0 0 0
13 0 0 0 1
14 0 0 1 0 |