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[+] Show/hide bicluster #61 rows and columns.
bicluster 61
Mycobacterium tuberculosis H37Rv
13x37
[+] Show/hide bicluster #61 rows (genes).
bicluster 61 genes
Mycobacterium tuberculosis H37Rv
13
[+] Show/hide bicluster #61 rows (short gene names).
bicluster 61 short names
Mycobacterium tuberculosis H37Rv
13
short_name
[+] Show/hide bicluster #61 rows (long gene names).
bicluster 61 long names
Mycobacterium tuberculosis H37Rv
13
long_name
[+] Show/hide bicluster #61 rows (NCBI RefSeq gene IDs).
bicluster 61 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #61 gene upstream sequences.
bicluster 61 upstream sequences
Mycobacterium tuberculosis H37Rv
12
upstream
[+] Show/hide bicluster #61 columns (arrays; conditions).
bicluster 61 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #61 ratios.
bicluster 61 ratios
Mycobacterium tuberculosis H37Rv
13x37
GENES Amp ARP4 Ascididemin_Natural_product CCCP Cerulenin CPZ DCCD Dipyridyl DNP DTT EMB Eta GSNO GSNO_CFZ GSNO_KCN GSNO_menadione INH KCN menadione mercaptoethanol Mtm Nigericin Oflox PA_1 PA_21 pH5_2 pH5_6 Rox starvation TRZ UV Valinomycin X_109 X_111895 X_121940 X_124196 ZnSO4
ORFD0043 0.700732181053239 -1.79962553930242 -0.53368150634934 -0.739551601222787 0.61809214814498 -0.978433680458399 -2.8511190449462 -0.193093169823595 -1.78072745294822 -0.342810190008499 0.431320072187003 1.32461755736766 0.519115243777264 -0.4412985690937 -0.392911982910637 -0.27236866304874 1.97659716798374 -2.22206086081019 -0.481035099730495 0.423791881824057 0.518805499853817 0.0291364075411707 1.12960955425950 1.08127039137461 0.572053601814087 0.103004216391346 0.171722511802055 -0.0505547017275104 -1.01222652008500 -1.80823681925727 0.234885406702228 -2.70940985201557 0.0115124089891305 -0.76197054635205 -0.201317455830072 0.272118440746638 0.94657203702891
Rv0432 0.130371315378268 -1.20907763042048 -0.48114979627335 -2.01319136963833 0.416219697426638 -1.32543198584674 -3.01191882044672 -0.443740317217722 -2.01563004191677 -0.524895365771172 0.305039704685899 0.69591506150821 0.978220795075286 -0.836317869591083 -0.752219680445932 0.0298342437958329 0.491706254436644 -2.44123300484404 0.497167059251641 0.762242386169706 0.00689404629547914 0.555102010479638 1.20263449020018 0.820759204097383 0.42759739095178 -0.0170132320230150 0.547038337108507 0.177798384586086 0.766901593740685 -2.26450708757757 -0.0246202226696166 -2.99018445990265 0.336638901601039 -0.690175740027039 -0.899171385005932 0.447237858035440 0.874923649151709
Rv0642c 0.987125830147324 -0.87688067719454 -0.107436170219172 -1.78899347227055 0.931484982545386 -0.462930153651313 -3.11571438575275 0.416532407156498 -2.00686223259011 -0.13586114537176 0.596558612862695 1.13509297600591 1.15170048714616 -0.153395315101760 -0.756666539459169 -0.0985425821835687 1.44875269773286 -2.6479619054817 -0.153051062724638 0.585023424787508 1.04297504363707 0.103480327309536 0.602323954949873 0.855329670679481 0.578699853565595 0 0.531535265543183 -1.30949952181058 -1.01858789275628 -1.95436425075996 0.805792762900109 -1.56976271966888 0.096098885389527 -0.137220111631496 -0.257648561325283 0.806624761243692 1.00540449007711
Rv0732 0.997225880952145 -1.06283122334733 -0.149000966487143 -2.58617342201645 1.05120930475882 -1.08584621665959 -3.11021224826816 0.0141002072093719 -2.79438821286992 -1.00005406850923 0.327775988601659 0.934065656953856 0.74286909863547 -0.545290955581015 -0.894712097475392 -0.193956803466126 1.21891969725651 -2.23255556921053 -0.0852859045747105 0.359850227574445 1.13405117211906 -0.092144533036029 1.22375934037340 0.577573363493462 0.669818184973485 0.155809174487185 0.465896785382989 0.461907984153756 -0.583580415315925 -2.02230108072731 0.840847887899742 -1.23925906634294 0.131761867062563 -0.295023845983588 -0.464045293876446 0.506017719465832 1.18124371741197
Rv0761c 0.99012808589991 -1.30152691612166 -0.312879061032306 -1.55003902121721 0.753104213541382 -0.838551058022609 -2.59054010841801 -0.126525984039831 -0.825884840246523 -0.656725333597361 0.55120082200717 0.810109237340997 0.697516678094761 -0.0444459898995165 -0.0831633422819994 -0.291806613431135 0.496098289312844 -1.90479191505747 -0.613430636149362 0.008399153238372 0.633540264517856 0.336277336713534 0.983159894643998 0.828259483284875 1.49351800039557 0.0452971357273826 0.093782482422615 -0.114954612440493 -0.261754368124604 -2.16900063836571 0.662842142004509 -1.25549929207186 0.170757555757394 -0.793612948440102 -0.256912414441181 0.465644483956947 0.91760854401794
Rv1078 0.519994205450291 -1.19636861121942 -0.258949719563201 -2.10117449854657 0.68733196336383 -1.38956612438095 -2.65630431344436 0.191013154577011 -2.33388438757211 -0.518739705157968 0.194104392603089 0.438060187011641 0.357580699436755 -0.586264952012164 -0.478124126058864 -0.648440747329364 0.733188470084949 -1.73925960695313 -1.03676260390320 0.762202574974218 0.598667215923006 0.545776984660004 0.240490574459765 0.89317461125745 0.752060148577386 0.175033643787470 0.586935493248962 -0.28331428652371 -0.200935082594862 -2.16448663481481 0.426194973967898 -2.73893620542125 0.135260103579803 -0.105978850792289 -0.508144247786439 0.304042637357328 0.485216577041563
Rv1111c 0.704822885124672 -1.69764431039267 -0.331891584928967 -2.06547725629209 0.998105114530798 -0.922696424669436 -3.03300016771521 -0.418976066441136 -3.01388291591522 -1.03802426555879 0.449591330611604 0.761796319675422 0.960997397636006 -1.09743051492885 -1.34759186257358 -0.424100166511654 0.917516118004964 -2.05647360285926 -0.728133641474543 0.538110666661738 0.788596822873416 -0.55617886264928 0.656139666525642 0.680904503417918 0.684054564917641 -0.0296724536625412 0.14473138366213 -0.697840823702917 -1.03668794966479 -2.52513058804033 0.383914565476002 -1.85344555706830 0.634532425915136 -0.518362751978441 -0.79718607026164 0.497598995842534 1.03836019048422
Rv1240 0.623500221270273 -1.92271478499534 -0.886461163598325 -2.46472330649258 0.574445832349326 -1.63370834538056 -2.70836979877549 -0.453335539219088 -2.08820532006090 -0.682768590375703 0.426958776944937 0.491086303960244 0.323263575711519 -1.45214798881049 -1.03122965803827 -0.946474903761636 0.491095975169278 -2.19962163186191 -0.595942196811272 0.0552102177833725 1.24484150283335 0.124613501089819 0.788885707981195 0.528371725588726 0.276306601067417 0.405752137715224 0.903309342335047 0.294911585722122 -0.641629020577318 -2.73277037217417 0.559953660968307 -2.31130663761675 0.1605459021956 -1.29055639520979 -1.04965695347501 0.396909238924552 0.456915493462791
Rv2951c 0.450249324248516 -1.30448630375580 0.136477351029859 -2.54277853114877 0.565610545192921 -0.652035562187576 -3.80117427233482 0 -2.77272988745455 -1.03570401186980 0.736842017012506 0.928491938736216 0.166594689422014 -0.719410814521856 -1.30624349999572 -0.343862316605975 1.54612403908488 -2.37792043619072 -0.800983784972437 0.734366844109923 -0.0534176742653646 0.505970064932053 0.231154865926822 0.49229410657452 0.324201234229535 -0.268204526275029 -0.155099312600829 0.176337774920789 -0.321626757511814 -1.54975140068209 0.294360341253628 -2.34625847080653 0.514220523421289 -0.253135521957562 -0.484890387250743 0.501543389221950 0.660228655590031
Rv3224 0.579062392279226 -1.42830287241997 -0.534336052773209 -1.47106088470497 0.741827611888878 -1.74668264053079 -2.97383722304488 -0.32590285889489 -1.81242178533089 -1.0087423687319 0.466143588257757 0.73376786333823 0.609573063649528 -0.98596415571687 -0.613810684998582 0.395450078008029 0.832718076256671 -2.30783131225617 0.0211249956496925 0.400428097691373 0.980734701026413 0.329888067441173 0.175368738967269 0.716234193008856 0.809179818934067 0.37513960251586 0.837245988294114 0.133062108035678 -1.09254527776523 -2.19057144522802 1.11328416343051 -2.99432447252978 -0.266179712992608 -0.869733164812759 -0.278427107709453 0.635495780948782 0.290145127833842
Rv3631 0.842785973637097 -1.07546383424186 0.202993935245903 -1.99441618965763 -0.119752347417640 -0.534886954103582 -3.72458568873229 0.185514294085951 -1.46762265552592 -1.04848165754898 0.582842990727165 0.850612794348984 0.193048097889919 -0.114087479856462 -1.69970703817041 -0.150730445253571 1.06283104201485 -2.72829097779053 -0.958236387889926 -0.0418332745187191 0.78966924624726 0.0183197065421726 1.15824949431884 1.21168544090626 0.91500449542726 0.0487129451438772 0.547681328765013 -0.965869904772564 -0.217596703005797 -2.01388423596444 0.625825389529948 -1.98417253158569 0.69276246169768 0.595912621831462 -0.471928654626899 0.474992751281248 0.837397429421257
Rv3678c 0.697060968396315 -1.42226815377563 -0.133022466379549 -1.86932782736429 -0.210474805390008 -0.812788417633569 -3.66413301261371 -0.438131957353756 -1.61055320561131 0.534477189018639 0.746747189194559 0.9959557901981 0.276828934628889 -0.0772164163521907 0 -0.323991336769953 1.59186891118077 -1.64766625720261 -0.323787363054174 0.132636568787371 1.02677729839691 0.0431597408473356 1.88941040677040 0.594473915172489 0.337682105827005 -0.063808421243352 0.463188870136063 -0.947120089762209 -0.725703160120519 -2.16699621114251 0.869806864731051 -3.00142613736878 0.546319272568726 -0.477092219920977 -0.678308615755525 0.520786962662912 0.598852323234244
Rv3726 0.503756879515457 -0.866188012591754 -0.277737284683145 -1.69350132145184 0.102663426569311 -0.750222482442891 -3.16669120662382 -0.234115279672732 -2.44542836196382 -0.7622322466314 0.888884071598041 0.880511481584818 0.219783643609393 -0.788156693196986 -1.95619723201132 -0.753173998798185 0.755210967060768 -2.79942559012808 -0.287127137163999 0.134410181416469 0.805219320160122 0.083554726491777 0.692368748465295 0.0996169783340208 0.202420084612667 0.444669143922865 0.578995286525886 -0.721198883834235 -0.216704516174457 -1.08255671926629 0.84619121277253 -3.08939309530446 1.02061151722275 -0.779019346584512 -0.397249625931021 -0.199480302051743 0.630902746722509
[+] Show/hide bicluster #61 motif PSSM #1. bicluster 61 motif PSSM #1 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 0 0 1 0
2 0.583333 0.416667 0 0
3 0 0.25 0.416667 0.333333
4 0 0.166667 0.833333 0
5 0.166667 0 0 0.833333
6 0 0 0 1
7 0 0.083333 0.75 0.166667
8 0.916667 0.083333 0 0 [+] Show/hide bicluster #61 motif PSSM #2. bicluster 61 motif PSSM #2 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0.272727 0.545455 0 0.181818
2 0 0 0.454545 0.545455
3 0 0.545455 0 0.454545
4 0.090909 0.181818 0.454545 0.272727
5 0 0.454545 0.454545 0.090909
6 0.090909 0.636364 0.272727 0
7 0.545455 0 0.090909 0.363636
8 0.181818 0.363636 0.090909 0.363636
9 0 0.818182 0.181818 0
10 0 0 0.636364 0.363636
11 0.454545 0.272727 0.272727 0
12 0 0.272727 0.727273 0
13 0.181818 0.363636 0.090909 0.363636
14 0 0 0.363636 0.636364
15 0 0.090909 0.818182 0.090909
16 0.818182 0 0 0.181818
17 0.181818 0.818182 0 0
18 0.181818 0.818182 0 0
19 0 0.454545 0.090909 0.454545
20 0.090909 0 0.545455 0.363636
21 0.727273 0.272727 0 0 |