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[+] Show/hide bicluster #59 rows and columns.
bicluster 59
Mycobacterium tuberculosis H37Rv
23x37
[+] Show/hide bicluster #59 rows (genes).
bicluster 59 genes
Mycobacterium tuberculosis H37Rv
23
[+] Show/hide bicluster #59 rows (short gene names).
bicluster 59 short names
Mycobacterium tuberculosis H37Rv
23
short_name
[+] Show/hide bicluster #59 rows (long gene names).
bicluster 59 long names
Mycobacterium tuberculosis H37Rv
23
long_name
[+] Show/hide bicluster #59 rows (NCBI RefSeq gene IDs).
bicluster 59 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
44
[+] Show/hide bicluster #59 gene upstream sequences.
bicluster 59 upstream sequences
Mycobacterium tuberculosis H37Rv
23
upstream
[+] Show/hide bicluster #59 columns (arrays; conditions).
bicluster 59 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #59 ratios.
bicluster 59 ratios
Mycobacterium tuberculosis H37Rv
23x37
GENES Amikacin ARP4 Ascididemin_Natural_product BZA Cap Cephalexin Cerulenin Clofazimine Clotrimazole CPZ Dipyridyl Econazole EMB Eta GSNO_CFZ GSNO_CPZ GSNO_menadione H2O2 INH Levo menadione Mtm Nam Oflox PA_1 Palmitate pH4_8 pH5_2 Rif Rox SM Tet UV X_109 X_111895 X_124196 X5CL_PZA
Rv0001 -0.265100074632655 -0.702547119251213 0.706687211084368 -0.204038071250857 0 -0.0790270373841764 0.275017739100789 0.644271857669889 0.531907945211653 0.143995828508210 0.984844186129042 0.572289192629026 0.118270123488062 -0.550832689649113 1.62681864386790 -0.352574035940033 -0.00859687552822717 -0.2083593369642 -0.722368700103321 0.0671002986487887 -0.427557051736109 0.0299218094334770 -0.141373956854183 0.0339145758813929 0.224203259441224 0.257537309690776 -0.299121248825603 -0.537568298719164 -0.648927744109906 -0.509566503953721 -0.0589092491844875 -2.06048930137791 0.108010620977534 -0.199577693516038 1.00103982345278 0.479739984460456 0.858240647868734
Rv0679c -0.729532883795325 -0.602940934878436 0.660952918866537 1.35633364757686 -0.732145167205216 -0.568336545724764 -0.29354964472542 1.57528386778657 0.630700830495089 0.771251961680784 0.700905633005225 1.32717024345786 0.0219440278357341 0.0482888922521208 1.4826801860735 0.684863267666905 -0.533074877739079 -0.426253352234352 -0.283411459319658 -0.58117204436925 -0.0976486941720999 -0.122223841187921 0.868268689644697 0.168844008645825 -0.380319780644163 0.613937328630297 0.228908265243226 0.998828593719072 -0.204575532746194 -0.141388228851810 -0.585670674635828 -1.20921702248752 -0.672628330940481 -0.111123463317853 1.04245527729018 0.309422090873249 0.988625375303663
Rv0875c -0.615192762223304 -0.223084581933746 -0.0135927983772196 1.02786144960691 -0.832439149379365 0.0383136910051459 0.00428496770336623 1.28791086811855 0.163967960067410 0.728783500692427 0.0846405876264879 0.237260373991937 -0.0379490543553964 -0.2719996827196 0.484608063077671 0.401192552455162 0.334961452169601 -0.521872680777247 -0.39472670387073 -0.0828041995229543 -0.327213373154160 -0.61977974219079 0.326880720232725 -0.302673605436593 -0.0277684610620408 -0.288087945386557 0.103569567155166 0.096087912859715 0.509199937564465 -0.918022220907783 -0.693485314357014 -1.47816092518175 -0.480518405307182 -0.0828329982543279 0.361277134711441 -0.152178662644590 0.535171281918985
Rv1107c -0.385537631240219 -1.37917462868928 0.430062219893561 0.471269045168373 -1.25876167167532 0.487556893372731 -0.132112282840294 0.828071400139606 0.720859981597547 0.498411701846752 0.521588818664851 0.536287246895217 -0.0901398015684431 0.438851349751036 0.680330962616214 0.298625144424438 -0.6764747429903 0.127622311105841 0.380174335796661 -0.0432381834060055 -0.717510103139907 -0.0053175826067847 0.114806129065129 0.234072432975263 0.576763969920533 -0.0139675058492545 0.252112521184422 1.01013972749206 0.260134948120495 -1.42245112658483 -0.386961080603055 -0.537812018676786 -0.59020129071524 0.744275357070085 0.681393699951241 0.600818788160739 -0.0645589758326641
Rv1163 -0.760444819392449 -0.0799936318428057 -0.015055001932303 0.663244100217818 -1.44083696645170 -0.418309521940068 -0.354896455190291 0.991860571351358 0.642692563781264 0.076835975217425 0.351222480088799 1.01154672485133 -1.18106616529334 -0.123963667517834 0.343922291290543 0.240498738350360 -0.493360424853865 -0.835795275584736 -0.662089050780983 -0.00263089423336083 -0.590766441207446 -0.897043760519625 0.02901498359599 -0.496424435118037 -0.294373384966728 0.665505820434047 0 0.298750332544375 -1.08067878720366 -1.38198858227697 -0.995831197033364 -2.4128586523652 -0.808586238168913 -1.11124446634390 0.122683865403492 -0.209727533379301 0.363848229757146
Rv1180 -0.172585938192278 -0.633779336961332 -0.0701505900699863 -0.309439586033868 0.143153254625615 -0.306981660856089 -0.284929986819746 0.0302634166706508 0.287330973927656 0.672389458622934 0.42634534376718 0.282344587787864 -0.0211427926280419 0.356494991532303 0.610417160960898 0.521274482878876 -0.653954177009529 0.0816977326573809 0.424923933456985 0.273558651495929 -0.828087858404744 0.374166527845919 -0.471368807080392 -0.0253586232875223 -0.334770579292069 0.394804190566297 1.67752538147706 1.41066849005715 -0.0228897931935999 -0.415833445676403 -0.442616445989341 -0.0870522276570421 0.0752345887972667 -0.159285831413310 0.510338260395328 0.201240572384022 -0.54526570172008
Rv1181 -0.742648922181706 -1.06672648999862 0.194319570808225 -0.356772200509662 -0.0569157795105956 -0.48720235872075 -0.0494608064817464 0.982061417997542 1.06275482057045 0.570228028933427 0.582790098974408 1.01415449239656 0.341841516399418 -0.0894557447454627 1.28587549785215 0.579839366378357 -0.416526639169813 -0.495629575077614 -0.323355727704954 -0.0480486380766305 -1.34815834214779 -0.246228338210271 -0.841492156997825 -0.673257983163901 0.352631433279393 0.86936743552361 1.22810490639340 0.16344851941989 0 -1.07754115447354 -1.12795285271843 -1.85561372015057 -0.606069909678337 -0.149065730760833 1.09475413002219 0.614664604877385 -0.760220340354552
Rv1183 -0.808174398769442 -1.42121566613344 0.177781421452556 -0.596884468708943 -0.552611189741018 -0.0857960097077152 -0.419949853560086 0.446994377476917 1.00169334038077 0.835856137766398 0.396741600946606 0.81142453785313 -0.133833495839383 -0.215270388582309 0.231613188574543 1.0755974976765 -1.70454142422725 -0.770455712664527 -0.0322485611295335 -0.0452267467470482 -2.15718375729126 -0.285583564424758 -0.576713452443276 -0.808214884572251 0.152584264073943 0.646321366757743 0.823964387952357 0.855407155759788 -0.265693418757163 -0.617585715504939 -1.20932060031318 -1.52548540561993 -0.612334925283224 -0.448263622075224 0.733432376471512 0.332188754907401 -0.137521545860511
Rv1620c -0.871873452544183 0.197783343968397 1.08194118694418 0.0752934233867566 -1.16833846921946 -0.182317673090412 -0.645893003406047 2.60374868753406 1.51562077059510 0.805245834758762 0.74818881443111 2.08165364339043 -0.796262070297665 0.00325797934964913 0.93144394482987 0.557689629824387 -0.216653110614757 -0.0722352901109591 -0.247029087972257 -0.291656350802434 -0.333143533872706 -0.619331600424031 -0.271424803155053 -0.650948051220456 0.830598775389304 0.864714481548051 0.0614695445077236 0.455790028039392 -0.474980320342898 -1.61786285618675 -1.24623314228008 -1.68467485910240 -0.828381809690849 -0.295315184324424 0.868555458474266 0.291857416949384 -0.572611397180876
Rv1621c -1.08980133995454 0.0558366557410209 1.17532151182143 0.339890932418028 -1.37573157095954 -0.146238215994884 -0.590917663372533 2.06934963781643 1.14528040416441 0.424895236649153 0.844464013627843 1.65919513064971 -0.214687139647704 0.239582358483269 0.82361208588486 0.56155518918156 0.0377550567005811 -0.105350306105940 -0.204603471571714 -0.854216955919431 -0.787248810543724 -0.445349709342205 0.119362031150014 -0.9468363366139 0.82959242755287 0.397743974560126 0.246818638862737 -0.109297387243446 -0.686396281908363 -1.76613566550633 -0.957752582753578 -2.94900792381416 -0.470004246155105 -0.0023195723838551 1.03642641932261 0.544438891994375 -0.0900420104957608
Rv1622c -0.96235615510613 -0.219923248522908 0.671004637166528 0.542290079802522 -0.538976955025248 -0.695505030009233 -0.505959545164214 1.79047281327020 0.814343515879814 0.644529156802884 0.560366131979924 1.29267816240585 -0.534153853886976 -0.0814288688954557 0.467114152410373 -0.151169472358226 -0.915813400054202 0.0573490033755583 -0.612187465408022 -0.547001886495261 -0.656136214265525 -0.22796495579394 0.419418893697256 -0.730217262536757 0.330511424328644 0.537294730032017 0.166286988808330 0.563388240516953 -0.274546873500427 -0.840472241306642 -0.698099032248035 -1.83480307612076 -0.925362549120209 -0.742473644565004 0.769421596515786 0.131767579101921 0.841008654565441
Rv1623c 0.0258977964046991 -0.858185754081867 0.619479692378325 0.782025302107142 0.181952233849852 -0.589388700764116 -0.698859424382803 0.779242865194106 0.398638273830557 0.268279502736564 0.280081567118571 0.547494483486777 -0.750692783480996 0.168928199604931 0.377161144213821 -0.0257836887327644 -0.616735336464414 -0.736982695400251 -0.150290749563397 -0.351110785681802 -0.918548361108816 -0.761531264623425 0.63369400410676 -0.649409128492979 0.589255710472301 0.419510705379222 0.545305888184415 0.377363549114384 -1.32412490465138 0 -0.85612583019654 -0.648306310059577 -1.40181512997762 -0.94187901288911 0.356853011367994 0.536761557238512 0.9119693752014
Rv1625c -0.931305070240474 -0.476201202006451 0.394611037539231 0.742052192916346 -1.38977676790658 -0.372285294282652 0.193709000523439 2.00041102961221 0.751058109320878 1.77067452808813 -0.0108772868182047 1.00399346124154 0.694884483688787 -0.22280615262044 -0.0767181795437307 1.44617980278768 -0.41049426365722 -0.274097879850711 -0.428769770750912 -0.312316170196384 -0.0397145620632489 -0.708767023466968 0.342295448029934 -0.266266469463078 0.571009351861691 0.0129182159059905 0.64040702995992 0.905554304690105 -0.193008290950642 -1.36972704811811 -1.00166189634199 -0.769240896378924 -0.640701357924144 -0.348580860163841 0.619201704400527 0.156006454664402 1.62971322622771
Rv1639c -0.728961764355082 -0.396989550004068 1.03580005174918 0.65726388419765 -1.71029231117743 -0.508777337098104 -1.14432837285677 0.444483294368452 0.184745485725896 0.422466437136204 1.09374974928219 0.563837874682636 -0.0839502038772076 -0.157523461879344 1.06720365408975 0.250289057084913 0.0988609883278824 -0.362424448471699 -0.285750663225234 0.131448535063639 -0.590577181928724 0.185329076336453 0.304388150932058 0.319712338237223 -0.350081037659842 0.397501715423849 0.801808110268885 0.876791914195442 0.120711804299682 -2.30515335253278 -0.257235714723013 -0.771865246821447 -0.237739375092478 -0.591257832155373 1.33993010985467 -0.0566451769073857 0.718506343822274
Rv1640c -0.997448830620152 0.98907969601165 0.524659688797254 0.248833604089207 -1.63682705536343 -0.205029512436475 0.313566242967114 1.34587989459925 0.522908134011537 0.824197934968536 0.641815505043784 1.11766194473894 -0.132611103517851 -0.798300816149166 0.708411935166044 1.92969546289045 -1.08431214385691 -0.385129331314616 -0.628388092655803 -0.305357021136421 -0.701413614523472 0.036157681255776 -0.0505166353416816 -1.04747845312379 0.408461225672061 -0.00791986860863262 0 -0.12534337355704 0.0749897459246209 -0.578119232604113 -1.17806900853481 -2.43216933157447 0.120742546684118 -0.0623669525529885 0.784539349361662 0.272804551698148 0.275169976663619
Rv2498c -0.223638052098326 -0.0436843959672321 -0.0335703108307411 0.386044760354637 -0.611814729638903 -0.160596184448843 -0.0700138588866125 0.77220205167701 0.235045963741908 0.671770631745936 -0.0577625598524853 0.0264521910575245 -0.061024134762699 -0.0743847977075187 0.209285884154009 1.10520730179281 -0.0319139587141594 0.418496526112546 0 -0.236554742853393 -0.163789646789335 0.0741331429023958 0.0698856642140639 -0.288630100284609 -0.0684003655319123 -0.368511620822784 0.256315252620870 0.34818066389192 -0.121848718083813 -0.485291866977319 -0.219269711369651 -0.181776214902986 -0.0257786576065362 0.000386396435854665 0.284713847123935 -0.127519375478976 -0.0629563814359598
Rv2499c -0.537243909056498 0.397622696385095 -0.167347827358810 0.426753481107894 -0.637690756422293 -0.203097275920656 -0.177823929350903 0.507743982306813 0.194277859629344 0.372180138967013 0 0.0362687966085298 -0.00624035112201472 -0.316995471336409 0.0509317799116178 0.277546858133668 -0.161404661853034 -0.446819535250917 -0.32781312871872 -0.0310106050829292 -0.131409124928763 -0.467826199349383 -0.000547081903855088 -0.26523939522627 -0.517470601927154 0.391025144348528 0.165046556762394 0.095964181901269 -0.219354625720943 -0.586242937101393 -0.435042874910097 -1.45801677456440 -0.246571741795690 -0.219011914554181 0.197145214090216 -0.24484851529561 0.359327712601436
Rv2501c -0.276376270251030 -0.134112786009258 0.0756670894557326 0.400064699724059 -0.889837054798655 -0.161873249781993 -0.251453476032935 0.43651271873691 0.196734857384279 0.366496589658862 0.173848222392295 0.0791692087266815 -0.210635696227882 -0.688865415771358 -0.207876599949413 0.27867876855624 -0.445331338510051 0.164262047998471 -0.95239675019962 -0.276738182372153 -0.414485278945758 -0.211616610765062 -0.166081709519040 -0.320880490573828 0.212492593429450 0.407364223497698 0.109514514360812 0.472336017779548 0.0892679850772144 -1.34406060504487 -0.65266542232953 -1.11174761882042 -0.0542547644164943 -0.46407829386715 0.443870057880598 -0.118895869623345 -0.191299327357453
Rv3087 -0.574574029060162 -0.77879119251996 0.523995331341736 0.352497847657278 -1.01274309159067 -0.428931844753452 -0.257224274303792 0.490704692376224 0.0746211658717208 -0.0890541719025068 0.317477387481974 0.0544459786611525 -0.530071133464252 -0.767064962511409 1.04720090173737 0.069279019086471 -1.33743784053094 -0.843932371002179 -0.725441491147272 -0.753884695596973 -1.10923394351397 -1.08263504979268 0.656575166584183 -0.6674164518453 0.149289447094053 0.0862594321386712 -0.319444217271016 -0.241086929434974 -0.219013895775814 -1.27899820159338 -0.885188486466971 -1.46896280285098 -0.711808279726067 -0.503240729985573 0.996734211778032 -0.00192380428239252 0.403918175204811
Rv3088 -0.126976238965519 0.584231964434066 1.19252908668954 1.23781715772297 -0.513446408117389 -0.0840729686517517 -0.133033785254539 0.944949554046418 0.427711660593762 0.226327567837026 0.88516012964069 0.488291040282823 -0.0845650950345322 -0.330064882998965 0.254108099455979 -0.179762928177786 -0.588580412160747 0.121961227134620 -0.47376580393477 -0.097233098182542 -1.29299758202988 0.018453738699695 1.13286082902325 0 0.413155855364083 -0.600998778024095 0.415355037806724 0.713917321473504 0.0420569785783313 -1.03039281529764 -0.119355595852921 -1.29069656167237 -0.222289459195544 -0.239131380808069 1.52289648547429 0.331822953561894 0.768319638155715
Rv3089 -0.486554860636401 -0.966215449554692 0.506289595921561 0.485624470687616 -0.441531340762327 -0.345147916482648 -0.266259939335818 0.316313191408811 0.202045745352024 0.282234600035806 0.519876506078419 0.084537738263599 -0.396689997678038 -0.66429835812114 0.591659113335585 0.375982129264826 -1.14032727791159 -0.664238633966672 -0.721726563599224 -0.55510559644409 -1.60160522062692 -0.802188901523629 0.427041348213765 -0.825929317182493 -0.061559788406073 0.0575794341245403 0.310865363793359 0.53005582961524 -0.472398718063257 -0.378684056291262 -0.494957136705913 -0.707819276585609 -0.336231515053655 -0.194348948742939 1.14484524017662 0.280312583286473 0.0448793711987289
Rv3577 -0.742471474185601 -0.498097743013028 0.274290384725877 0.803216029125097 -1.50923879120292 -0.47661226933969 -0.642359074078044 0.582280806051457 0.464542910115611 1.39938816661521 0.384627015358719 0.775280423539043 -0.382913483004831 -0.00108328879532395 0.446424470436557 0.86068356824689 0.438768604877453 1.19352309183985 -0.533256371051799 -0.368821199717168 -0.338045745530313 -0.176715550237912 0.0520534880649643 -0.033659777148585 0.207644462275973 -0.723217622553109 0.526482824634546 0.842539715664704 0.62332642865136 -1.75658052749901 -0.63756983977954 -0.30227661908214 0.117314750326826 0.422415730501125 0.718141597529896 0.369736698068791 0.217367358300691
Rv3867 -0.564992736023805 -0.467900997468752 1.03926027176917 0.8538299466586 -0.974481241302343 -0.142116311037758 -0.453333854775693 0.772351938665663 -0.50452060152361 0.92502721813649 0.660043684138853 -0.106927927089402 0.401747126888619 0 1.34707939890513 1.53092794300826 0.328820961444035 -0.529122371454142 -0.103641272970829 0.451446909269374 -0.109132201479707 -0.270902070497977 -0.0402460765351444 0.7962954245249 -0.0140343250635656 -0.440592594483102 -0.47064471023906 -0.0918694076306963 -0.377219790350556 -0.98370024476202 0.407255076170426 -1.76170299925634 0.491595140361131 0.450928926569981 1.15238610761487 0.16810423899409 0.175125417880360
[+] Show/hide bicluster #59 motif PSSM #1. bicluster 59 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0 0.142857 0.857143
2 0 0.857143 0.142857 0
3 0.714286 0 0.285714 0
4 0 0 1 0
5 0.142857 0 0 0.857143
6 0.142857 0.142857 0.428571 0.285714
7 0.857143 0.142857 0 0
8 1 0 0 0
9 0 0.285714 0.285714 0.428571
10 0 0.142857 0.857143 0
11 0.714286 0.285714 0 0
12 0 0.142857 0 0.857143
13 0.428571 0.428571 0.142857 0
14 0.714286 0.142857 0.142857 0
15 0.142857 0.714286 0 0.142857
16 0.142857 0.285714 0.285714 0.285714
17 0.285714 0.714286 0 0
18 0.714286 0.142857 0.142857 0
19 0.026416 0.902155 0.045012 0.026416
20 0.026416 0.759298 0.045012 0.169273
21 0.026416 0.330727 0.616441 0.026416
22 0.597845 0.187869 0.187869 0.026416
23 0.571429 0 0.142857 0.285714
24 0.285714 0.142857 0 0.571429 [+] Show/hide bicluster #59 motif PSSM #2. bicluster 59 motif PSSM #2 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0 1 0 0
2 0.2 0.8 0 0
3 1 0 0 0
4 1 0 0 0
5 0.6 0.4 0 0
6 0.8 0 0 0.2
7 0.6 0.4 0 0
8 1 0 0 0
9 0 0 0.4 0.6
10 0 0.4 0 0.6
11 0.2 0.8 0 0
12 0 0.4 0.6 0
13 0 0.2 0.4 0.4
14 0 0.2 0.8 0
15 0 1 0 0 |