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[+] Show/hide bicluster #57 rows and columns.
bicluster 57
Mycobacterium tuberculosis H37Rv
25x36
[+] Show/hide bicluster #57 rows (genes).
bicluster 57 genes
Mycobacterium tuberculosis H37Rv
25
[+] Show/hide bicluster #57 rows (short gene names).
bicluster 57 short names
Mycobacterium tuberculosis H37Rv
25
short_name
[+] Show/hide bicluster #57 rows (long gene names).
bicluster 57 long names
Mycobacterium tuberculosis H37Rv
25
long_name
[+] Show/hide bicluster #57 rows (NCBI RefSeq gene IDs).
bicluster 57 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
48
[+] Show/hide bicluster #57 gene upstream sequences.
bicluster 57 upstream sequences
Mycobacterium tuberculosis H37Rv
24
upstream
[+] Show/hide bicluster #57 columns (arrays; conditions).
bicluster 57 arrays
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #57 ratios.
bicluster 57 ratios
Mycobacterium tuberculosis H37Rv
25x36
GENES Antimycin CCCP Cerulenin Clotrimazole DIPED Dipyridyl DTNB Econazole Eta GSNO GSNO_CPZ GSNO_menadione H2O2 INH menadione mercaptoethanol Min_med__succinate_ Nam Nigericin Novobiocin NRP_1 PA_1 PA_21 Palmitate pH5_2 pH5_6 Procept_6776 Rifp starvation Succinate TLM TRC UV Verapamil X_241 ZnSO4
ORF07003 0.56560305789844 -0.457861739844393 0.476280980700202 -0.437903544661533 -0.0632148218977197 -0.112129818095372 -0.0893331166441262 -0.301757297551879 -0.460506781817434 -0.101266118333617 -0.343813396746739 1.36324520139542 0.414866042563364 -0.436753016235242 2.6204984677279 -0.0579379899175595 -0.993216982284066 0.909930592847004 0.38122181204184 0.00529053931357686 -0.373569160613549 -0.797238577270172 0.660297922269802 0.0127675603870708 -0.604779366744707 -0.776978097824088 -0.267165372664482 0.318222324942727 -0.937052104634984 0.319128754523627 0.0598672752280272 0.715168021618156 0.138889780955603 -0.183634014810202 -0.259373364632804 0.306339652938602
Rv0464c 0.197942781793138 -1.59719629730105 0.759527053596542 0.303426297477831 0.386090448035368 1.26409155163893 0.333577595795398 0.323893074757738 0.414013240266503 0.520727673284765 -1.11696410947465 2.02659091772614 -0.213624809878502 0 1.43036608705551 0.676644436903169 -0.295246370643372 -0.331981536073457 -0.557202035983988 -1.11772509438522 0.46974356256667 -0.660412666819225 -0.227207083579097 -0.0303948984761435 0.432840681511285 0.718705187977832 0.308603035204131 -0.155367733284428 -2.05313870174210 0.242858811483845 0.414971226774980 -0.96709013242121 0.00335865927548579 0.372983867688478 -0.368990897510155 0.453867887218829
Rv0465c -0.130629045031576 0.0680606713100041 0.504859143354472 -0.308576529651353 -0.138925988283848 1.92452559954750 -0.186476296840926 -0.222888167003796 0.251250735615632 -0.00430866469683919 0.793964618257754 2.17889633537904 0 0.356857242125725 2.34491843731756 0.0270163305617485 -0.78871453040045 -0.404858380468175 -0.457402145188231 0.0485101739990478 1.27102883387708 0.357843960941217 0.155845285295771 -1.13216360853549 -0.642726796259434 -0.53577364822275 1.22552449069022 -0.349462674589193 -1.04252443286040 -1.13880024184876 0.164480692707001 0.308906583750202 -0.377794308626559 -0.565149192580074 0.337256414474678 0.762000349048536
Rv0485 -0.192365309996273 0.850941222159818 -0.120509962033004 0.115677065802418 0.0548278643585083 0.398837090061946 -0.52395038838807 9.9003084822335e-05 -0.151572895958741 -0.845772361366282 -0.790364125623612 1.3839262421845 0.594111201265156 -0.0358316179450102 1.54574923886463 -0.01282693620584 -1.20013123573531 -0.91685505066246 0.0236209775180079 -0.00992364983044082 1.52400069835993 0 -0.369456727819918 -1.37726591752989 0.11886917892652 0.249679756554928 2.01439608463608 -0.00517193657811652 -0.477589223100997 -1.74306386978769 0.263986998756556 0.838313331629839 0.330837111469480 -0.536461762343608 -0.143118838693117 -0.312108058750864
Rv1103c -0.252221682058286 0.917097650278753 0.85336628504471 -0.687345474982502 0.566482923786487 0 -0.332560854027339 -0.448989743499252 1.46301812237492 0.0899887863374703 -0.447896893582327 0.731367556772918 -1.30326577689574 1.26019553139424 1.02791677224636 -0.127270019519392 -1.25461192891093 -0.386300261626058 0.28421223535978 -0.87368003280102 0.210169993592218 -0.018741527658698 0.574253530307561 -0.0489717590890781 -0.73212648602653 -1.08912153424813 1.18211071123059 -0.150735006659859 -0.426894645863802 0.0425578278880920 0.527072779502827 0.0966635229799351 -1.15651191196336 -0.810603904629209 -0.137254049327781 -0.605227584342903
Rv1585c -0.377019413236008 1.47691466243740 -0.00284071747567334 -0.00678629202923473 -0.0516599525123783 -0.229280604924228 -0.0857885257160464 -0.0486098168147475 0.0953458714487925 0.147302811296591 0.0780071612659198 1.21615835514814 -0.0252271456113587 0.193791459293827 1.67279406701617 0 -0.980592677107749 0.278357414148783 0.288464267461228 0.478772975339309 0.116332430251906 -0.553714225978904 -0.315533024642177 -0.352211410617553 -0.0983800429391585 -0.350218210572755 0.373777107326163 -0.339320846625878 -0.215298714186397 -0.394956877373628 0.090732226864826 0.526424875939519 0.0446926289033327 -0.02343667011646 0.0880031786023515 0.216705642375226
Rv1796 0.258183144619143 0 -0.331048323021820 0.533723941060872 -0.570943177415115 0.557718911581236 0 0.755603761199747 -0.125730682294165 0 0 0 -0.0649755451123996 -0.210199878845967 0 0 0 0.039358168437534 1.81468910529827 0 0 0.392297835775322 0.50583106124634 0 -0.00050718588377163 0.116163657588907 1.08481717902186 -0.716941979057307 -0.138040481290213 0 -0.0165077149936100 -0.503881919459201 0.181139494615566 0 0.480208881915723 0
Rv1955 -0.3064672935572 1.10769067619596 -0.0761885545403291 -0.120021025697010 -0.300905649503654 0.112352814721782 -0.281397140590096 -0.0429499595032932 -0.310915057839528 -0.396686818642525 0.221065471237367 1.39171817530060 -0.196629954226559 -0.553055207753223 1.96088289416779 -0.0599413794388589 0.544337333503096 -0.284825311826915 1.06315781675021 0.844847570087766 1.24154772025940 -0.214241933037635 -0.232614835738955 -0.206124467531264 -1.10050418107201 -0.388794410691552 0.946859748098793 -0.375640022533943 0.460198514071303 -0.720806081337825 -0.184309327163078 0.480150416414728 0.48999442837076 0.215758547045332 0.0326046332724729 -0.871342446752971
Rv1956 0.0598269304511162 -0.266524781644083 0.111062283112694 -0.382941499183099 0.193088725195135 -0.429654057627591 -0.156635963231369 -0.666281330241156 -0.0174407513023653 0.0552688678035049 -0.176968495022436 0.789075975291727 0.189139572692978 0 1.07610093494940 -0.125611889819853 -0.383745907916986 0.189139572692978 1.00712061422853 -0.247412425604223 0.846407817774743 -0.211368244253428 0.105541220355074 -0.322638052535527 0.189139572692978 0.189139572692978 -0.166291001916542 -0.683044918444871 -0.239975670794826 -0.619832830321359 0.0191843978103800 -0.315491482125505 0.189139572692978 -0.418443654612623 -0.317257802679807 0.400366954419425
Rv1957 0.238260898108372 -1.3613494389183 0 -0.148522715204131 0.271297544643851 0.0601914863883843 0.303230803604741 -0.169440113092957 -0.599664250191619 0.607861506819785 -0.329952929603715 1.09667135974750 0.41042588178572 -0.877899346730159 0.65998476858491 0.151319117077621 -0.294476271193442 -0.617158544280595 0.103491252059221 -0.871496750473559 0.569777792089945 0.242775572671962 0.538695238252909 0.258356471683107 -0.443105520215842 -0.160277757938157 -0.580624054548229 0.00562159497606679 -0.970425040625852 0.146463127823254 -0.125224891146540 -0.695429725513903 0.955796471535814 0.135077027580071 -0.31254841102815 0.617263872119022
Rv1959c -0.709404802655393 1.20758420846331 0.0826446548839331 -0.474836757542873 -0.230745118465617 -0.237947193227461 0.0428235162279209 0.00619789963448607 0 0.052072753374173 -0.225368390789614 0.632063011847137 -0.196130483809636 0.392138327051113 1.19644871271442 0.0694880384711499 -1.30551823541945 -0.711866366829247 1.23775073220816 -0.449917305680577 1.92004628159569 -0.78497873463076 -0.908722646158561 -0.254997811186189 -1.30491750582051 -1.16203141533359 0.794552282553587 -0.679071984591241 -0.795788589487287 0.0407078794830348 -0.36905952833871 -0.373357604784933 0.0786778434488969 0.161837660610231 -0.688529020859899 1.97315325903484
Rv2207 -0.20383500749069 -0.248876923570703 -0.0736634941702564 0.455833890196313 0.217238857311751 -0.56473042795149 0.00434941590502984 0.662293209493981 0.447216433725809 -0.742124624277516 0.0012209770002403 -0.113637337270811 -0.444755438669838 1.03824455183292 0.523169763851024 0.268900502033255 -1.80711545444728 -0.103396713476242 -0.00843281559085564 -0.071885523716284 -1.20437613040160 -0.110924039462988 0 -0.173654402280074 -0.202402814288682 -0.619470341577589 1.06937399999005 -0.688417811896561 -1.30531703363967 0.133270453868144 0.517848373698841 -0.639214321852586 0.243698595566104 0.112508642513065 0.555000368443973 -0.457840170469942
Rv2208 -0.336474221486309 -0.056473599573136 0.510683558178268 0.146177757033067 -0.216731328487188 -0.330275681772643 0.228858299262186 0.138120946781439 0.0282526451535555 0.0110780786434141 -0.662199352617129 2.05526913885789 0.867413122034958 -0.0949014249399698 4.17858695977175 0.106537949957226 -2.20333545839768 1.62658075116175 0.43608848477275 -0.973657504049062 0 -0.582194171234174 -0.758819750418032 -0.180131087199086 -0.243372492985442 -0.412803707026621 0.885592944358907 -0.938855865971586 -0.770561065510156 -0.40469498647094 -0.0464391815505061 0.375792049570482 0.159782999604846 0.114809107762961 0.074755881126333 -0.520323984650891
Rv2254c 0.200091367837444 0.533212259090582 -0.0412830691132588 -0.309454452119815 -1.07520468124301 0.195761308609279 0.125205693554297 0.0740883328586343 0.231294577956998 -0.231733478612216 0.256573082599407 -0.156508436905782 -0.0769509628714946 -0.0526693348341656 0.352538429987014 0.146943469705795 -1.23786585725441 -0.244336689924637 0 0.281382088949016 0.0444699483695465 -0.0549010686205013 -0.131297983553410 -0.501977141996353 -0.327818501062946 -0.325326118285494 0.471546953161763 -0.372419227296349 -0.145490517579240 0.393156434960813 0.0414058634447287 -0.00649265316828765 -0.545994580397192 -0.0829610574341662 -0.053622461398412 0.136127797505087
Rv2453c -0.120766100548013 -1.04038797283566 0.049324009312616 0.0816085925869788 0.207719987094591 0.749953322886235 0.076833642121538 0.281565976321817 -0.153570530146146 -0.353760631028505 0.030373763020571 0.94030220662531 0.199061651663445 -0.400345461234049 1.25485931629376 0.075885091182535 -2.21992104243999 -0.71999068343124 1.69307452834401 -2.26062441397200 0.637924113812047 0.252696292461565 0.252540045001219 -1.11157070010156 0.149087884328329 0.185355936239043 0.147648287775874 0.517756038060507 -0.890926266604267 -0.422086705810082 -0.33650551225806 -0.892466171936838 0.152114972308998 -0.148166356758051 0.147425666788111 0.0371202038118152
Rv2454c -0.184439978177461 0.00409081163490167 -0.0604723452519898 0.344499763881837 -0.838158592703913 0.230642838803899 -0.68566044295248 0.282873877344584 0.0259294053941621 -0.330332592040136 0.593461591369001 1.18015179699663 -0.597846009888159 -0.591048428285988 1.60633796853535 -0.184643400090617 -0.984037808527854 0.0398808471228343 0.692526672591873 -1.57933089826282 1.28240445610173 0 0.244829615934048 -0.532364113472245 0.215450683713293 0.249385376449446 0.638663255150773 -1.02348186434094 -0.283776557051091 0.00947938620651196 -0.369099525062956 -0.559378702022324 -0.22095605143022 -0.674370078488854 -0.527625194530387 0.126324461539800
Rv2595 -0.202855011752156 0.242764985866222 0.686893179409733 -0.356054100803125 -0.456485195539585 0.192557156387710 -0.376328611908207 -0.564589878794695 0.812668654205313 0.181233544834034 0.25522051626878 0.303337098611584 -1.45362441464496 1.07203332506866 -0.626427287357549 -0.275884250253027 -2.25063549325207 -0.455220887429911 -1.05803896295448 0.919274260988478 -0.601926241363911 0.602821578018424 0.485151782050286 -0.604126619972288 -1.82189011957072 -1.37550060652921 0.850379445656758 -0.47039037492044 -1.36833989098457 -0.393207051264952 0.0848989876168518 0.0111401846534276 -0.120279835497290 -0.604569613756093 -0.182691712223304 0.7503503957945
Rv2606c 0.0844035900038349 0.471853781926044 0.34984361973745 -0.360402926952608 -0.84119635418702 -0.463217976787796 0.5902608271287 -0.251165567344858 0.368673509095139 -0.195149043083432 -0.351622637135491 0.479364845362931 0.126998330988404 0.425025093681884 0.973574748967358 0.419427699986245 -2.41631283070748 -0.613335566555 1.10575067058544 -0.216560703112802 0.187080496821827 0.436777854215807 0.0117632249792308 -0.187943470445449 -0.456166558807416 0.0528640343457399 0.0388955097786337 -0.222632643383954 -0.601356703431273 -0.0206404505424094 0.439335589567617 -0.821715176500157 0.0470710102912405 0.283156080198962 -0.347604076908344 0.348873493787372
Rv2642 -0.0532921455740704 0.50011448026389 -0.0668238546990205 -0.432741060931051 -0.222235860171297 1.02637225722648 -0.080992113474692 -0.218841543791348 -0.0967251417407287 0.123049190528459 -0.353310394548672 0.503634106044946 0 0.112087229491027 0.758721748162215 0.0156732214650993 -0.420346005537208 -0.4909594856263 -0.367048579577287 -0.534760844382329 0.0623822184630247 0.197416495009738 0.098464377579355 -0.678198918185597 -0.152258664304682 -0.388906395475427 -0.164169236797489 -0.320540806276201 -0.346938032358151 -0.907855782090676 -0.042842350149103 0.00353901840486962 -0.000573821321100485 -0.255091713532009 -0.163294269862763 0.0773246423438284
Rv2707 -0.548390022184269 0.644486215868431 0.270148894424262 -0.182649150056623 -0.218984501533265 0.0283531269493963 -0.0848325586669853 -0.374916900858555 0.203451211005901 -0.101028675699894 -0.101138058917692 1.65919438473626 -0.220849791308559 0.0962740072114598 2.12771309023264 -0.233981764084195 -1.42839384754924 -0.534277313501333 1.21365817785905 0 1.09361446027569 -0.317966941927940 -0.197020166961393 -0.74694299770995 0.443883192780939 -0.0265110164230207 0.761996292132055 -0.100741874757328 -1.12478122289862 -0.887935226215456 -0.101108711830375 0.61438622002135 -0.581365423194307 -0.354772034073963 -0.301937273524626 0.0280441306966812
Rv2887 0.280986579868349 0.139632906229159 0.291012194099869 -0.280607076601359 -0.130297327176539 -0.173481228888397 -0.142476110374634 -0.718579070688783 0.389693415427473 -0.732348482236956 0.085811440448798 1.65372177092041 0.236911652825106 0.9391137754359 1.64276232980726 -0.0487909167066979 -2.26107559027899 -0.306998988256536 0.511380830356773 -1.31911819972840 -0.072762980876585 1.07824489897543 -0.095483868928833 -0.993855452509146 -0.218372134710864 -0.192324334130435 1.20472098913199 0.554464864167146 -0.395094823120047 -0.743396577152515 1.41729769554470 -0.597715733610265 0.297800071357832 0.522368571167383 -0.724938684671507 0.200342642494834
Rv2987c 0.422334227664095 -1.28765700421704 0.253687877131266 -0.724478989029324 0.249433813164541 1.08308369231714 0.548015323776181 -0.66371568164488 0.0521770089809016 0.332609761473793 -0.994206287884275 1.18381910965362 0.80706935355885 -0.0662373879028431 1.24771376323996 0.661087024716995 -1.34442522973909 -0.246301187635042 -0.655434910363642 -1.34637561678714 -1.49784268721073 -0.98059249735193 -0.894401081491902 -0.96264040742229 -0.680011419022494 -0.158560947892391 0.785089122993959 0.241854897588933 -1.63160610127912 -1.16130083654412 -0.109569804606743 -0.0113120586654475 -0.11855361378708 0.261586504966232 -0.0820963865288233 -0.173309711674152
Rv3485c 0 0.296440090687762 -0.802568143722353 -1.23238294675868 -1.06766038089972 1.20119569899626 0.0202460758305043 -1.60874881078325 0.207982777806857 0.30847051332937 0.365373930716162 0.998274008177567 -0.691122437869427 0.355189725677398 0.913702867562971 0.842699520201978 -0.814165622492093 -0.620873901278176 0.196223953479386 -0.533204438624092 0.0502924438439714 -0.0990216001497593 0.883182405621596 -0.783770107716445 -0.914750086899619 -1.07470108957576 -0.116576003533824 -0.355103238688932 -1.17634187074568 -0.946158915133335 0.126329466751923 -0.749287238347171 -0.162600122407096 0.0663485636455326 -0.653236864395507 0.47496873433195
Rv3490 0.150062576468218 -0.764334852784596 0.161140165033012 -0.396332826101406 -0.582841205238766 -0.0133188455359297 -0.543167286346241 -0.0892905590574672 1.05084292510087 -0.301939821836603 -0.564885063106059 1.54552077897197 0.248580755446176 0.875967974829062 1.97060420250544 -0.513486080462312 -1.33593831629177 -0.149610433026552 -0.44490748947378 -0.552882016839519 0.522531704044139 0.527957672428085 0.499409327467308 -1.77796339681899 0.202645783799983 0 1.50731563757773 -2.28285835869354 -0.863709808440382 -1.12825975426838 0.775349807942829 0.0849698138309214 0.078238964199808 -0.345791775965715 0.605745578930141 -0.491275126505891
Rv3862c 0 -0.329653445995290 0.735903884843043 -0.274063953997462 0.578068418323793 -0.0245874665103049 -0.576844592284855 -0.542486976870932 0.399617451938169 -0.0879123578559247 0.960754401594305 0.654957377694897 0.265941023060236 0.811650895078682 0.335662184065945 -0.427983512650389 -0.406870488124011 0.0431511297314678 -0.0549912247066591 -0.138665535935042 0.108876062909318 0.515238177186382 0.226712216454629 -1.12252033953115 -0.63362070206967 -0.196412972261408 0.334730277672702 -0.069091702935495 -0.136221575418440 -1.415407751958 0.466916075897663 0.272251112373596 -0.434622644983357 -0.144034004753631 -0.508523675688537 0.176259890484675
[+] Show/hide bicluster #57 motif PSSM #1. bicluster 57 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0 0 0 1
2 0 0.888889 0 0.111111
3 0.222222 0.444444 0.333333 0
4 0.555556 0 0.444444 0
5 0 0.333333 0.555556 0.111111
6 0 0.611111 0.222222 0.166667
7 0.222222 0.5 0.166667 0.111111
8 0 0.944444 0 0.055556
9 0 0 1 0
10 0 0 1 0
11 0 0.833333 0.166667 0 [+] Show/hide bicluster #57 motif PSSM #2. bicluster 57 motif PSSM #2 Mycobacterium tuberculosis H37Rv 18x4
POSITION A C G T
1 0 0 1 0
2 0 1 0 0
3 1 0 0 0
4 1 0 0 0
5 0 0 0 1
6 0 0 1 0
7 0 1 0 0
8 0 0 1 0
9 0.333333 0.333333 0.333333 0
10 0 0 0.666667 0.333333
11 0 0.333333 0.333333 0.333333
12 0 0 0 1
13 0.333333 0 0 0.666667
14 0 0 1 0
15 0 0 1 0
16 0 0.666667 0.333333 0
17 0 0 0 1
18 0 0 0 1 |